RNA–Protein interactions for RNA: ENST00000539176.1

KLHL42-202, Transcript of kelch like family member 42, humanhuman

TSL 3

Gene KLHL42, Length 1,894 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KLHL42-202ENST00000539176 NPPBP16860 134 aa24.42■■□□□ 1.5
KLHL42-202ENST00000539176 TACR1P25103 407 aa24.42■■□□□ 1.5
KLHL42-202ENST00000539176 ASMTP46597 345 aa24.42■■□□□ 1.5
KLHL42-202ENST00000539176 RACK1P63244 317 aaKnown RBP24.42■■□□□ 1.5
KLHL42-202ENST00000539176 ILF3Q12906 894 aaKnown RBP eCLIP24.42■■□□□ 1.5
KLHL42-202ENST00000539176 ABRAXAS1Q6UWZ7 409 aa24.42■■□□□ 1.5
KLHL42-202ENST00000539176 PARGQ86W56 976 aa24.42■■□□□ 1.5
KLHL42-202ENST00000539176 ZNF548Q8NEK5 533 aaPredicted RBP24.42■■□□□ 1.5
KLHL42-202ENST00000539176 OR7G3Q8NG95 312 aa24.42■■□□□ 1.5
KLHL42-202ENST00000539176 NELL1Q92832 810 aa24.42■■□□□ 1.5
KLHL42-202ENST00000539176 NEIL2Q969S2 332 aa24.42■■□□□ 1.5
KLHL42-202ENST00000539176 CIB1Q99828 191 aa24.42■■□□□ 1.5
KLHL42-202ENST00000539176 C9orf16Q9BUW7 83 aa24.42■■□□□ 1.5
KLHL42-202ENST00000539176 ACAT2Q9BWD1 397 aa24.42■■□□□ 1.5
KLHL42-202ENST00000539176 CCDC177Q9NQR7 707 aaPredicted RBP24.42■■□□□ 1.5
KLHL42-202ENST00000539176 PRMT8Q9NR22 394 aaPredicted RBP24.42■■□□□ 1.5
KLHL42-202ENST00000539176 ZNF624Q9P2J8 865 aaPredicted RBP24.42■■□□□ 1.5
KLHL42-202ENST00000539176 SPAG17Q6Q759 2223 aa24.41■■□□□ 1.5
KLHL42-202ENST00000539176 TDGF1P13385 188 aa24.41■■□□□ 1.5
KLHL42-202ENST00000539176 TRPC1P48995 793 aa24.41■■□□□ 1.5
KLHL42-202ENST00000539176 CCT8P50990 548 aa24.41■■□□□ 1.5
KLHL42-202ENST00000539176 LAPTM5Q13571 262 aa24.41■■□□□ 1.5
KLHL42-202ENST00000539176 THEMIS2Q5TEJ8 643 aa24.41■■□□□ 1.5
KLHL42-202ENST00000539176 TMPRSS11BQ86T26 416 aa24.41■■□□□ 1.5
KLHL42-202ENST00000539176 C1orf216Q8TAB5 229 aa24.41■■□□□ 1.5
KLHL42-202ENST00000539176 PATE1Q8WXA2 126 aa24.41■■□□□ 1.5
KLHL42-202ENST00000539176 GBP5Q96PP8 586 aa24.41■■□□□ 1.5
KLHL42-202ENST00000539176 MTERF1Q99551 399 aaKnown RBP24.41■■□□□ 1.5
KLHL42-202ENST00000539176 PPT2Q9UMR5 302 aa24.41■■□□□ 1.5
KLHL42-202ENST00000539176 A6NCN8 305 aa24.41■■□□□ 1.5
KLHL42-202ENST00000539176 TMEM221A6NGB7 291 aa24.41■■□□□ 1.5
KLHL42-202ENST00000539176 FAM220BPB1ANY3 271 aa24.41■■□□□ 1.5
KLHL42-202ENST00000539176 M0R296 226 aa24.41■■□□□ 1.5
KLHL42-202ENST00000539176 ERGP11308 486 aa24.41■■□□□ 1.5
KLHL42-202ENST00000539176 HOXB9P17482 250 aaPredicted RBP24.41■■□□□ 1.5
KLHL42-202ENST00000539176 ATP6AP1Q15904 470 aa24.41■■□□□ 1.5
KLHL42-202ENST00000539176 CATSPEREQ5SY80 951 aa24.41■■□□□ 1.5
KLHL42-202ENST00000539176 OR52E1Q8NGJ3 308 aa24.41■■□□□ 1.5
KLHL42-202ENST00000539176 GPBAR1Q8TDU6 330 aa24.41■■□□□ 1.5
KLHL42-202ENST00000539176 SETD7Q8WTS6 366 aaKnown RBP24.41■■□□□ 1.5
KLHL42-202ENST00000539176 CPPED1Q9BRF8 314 aaPredicted RBP24.41■■□□□ 1.5
KLHL42-202ENST00000539176 KAT8Q9H7Z6 458 aaKnown RBP24.41■■□□□ 1.5
KLHL42-202ENST00000539176 FAM120CQ9NX05 1096 aaKnown RBP24.41■■□□□ 1.5
KLHL42-202ENST00000539176 FOXE1O00358 373 aaPredicted RBP24.4■■□□□ 1.5
KLHL42-202ENST00000539176 LAMTOR5O43504 91 aa24.4■■□□□ 1.5
KLHL42-202ENST00000539176 JUNDP17535 347 aa24.4■■□□□ 1.5
KLHL42-202ENST00000539176 PSMB5P28074 263 aa24.4■■□□□ 1.5
KLHL42-202ENST00000539176 PHC1P78364 1004 aa24.4■■□□□ 1.5
KLHL42-202ENST00000539176 PLIN5Q00G26 463 aa24.4■■□□□ 1.5
KLHL42-202ENST00000539176 CSTF1Q05048 431 aaKnown RBP24.4■■□□□ 1.5
KLHL42-202ENST00000539176 CYP2A13Q16696 494 aa24.4■■□□□ 1.5
KLHL42-202ENST00000539176 PRAMEF14Q5SWL7 426 aa24.4■■□□□ 1.5
KLHL42-202ENST00000539176 TMTC4Q5T4D3 741 aa24.4■■□□□ 1.5
KLHL42-202ENST00000539176 WASH2PQ6VEQ5 465 aa24.4■■□□□ 1.5
KLHL42-202ENST00000539176 LAS2Q8IYD9 372 aa24.4■■□□□ 1.5
KLHL42-202ENST00000539176 MAML2Q8IZL2 1156 aaPredicted RBP24.4■■□□□ 1.5
KLHL42-202ENST00000539176 RNF175Q8N4F7 328 aa24.4■■□□□ 1.5
KLHL42-202ENST00000539176 LINC01555Q8NAE3 123 aa24.4■■□□□ 1.5
KLHL42-202ENST00000539176 OR8J2Q8NGG1 315 aa24.4■■□□□ 1.5
KLHL42-202ENST00000539176 MIEF2Q96C03 454 aa24.4■■□□□ 1.5
KLHL42-202ENST00000539176 MVB12BQ9H7P6 319 aa24.4■■□□□ 1.5
KLHL42-202ENST00000539176 WASH6PQ9NQA3 447 aa24.4■■□□□ 1.5
KLHL42-202ENST00000539176 TAAR2Q9P1P5 351 aa24.4■■□□□ 1.5
KLHL42-202ENST00000539176 PCDHB14Q9Y5E9 798 aa24.4■■□□□ 1.5
KLHL42-202ENST00000539176 MUC3AQ02505 3323 aa24.4■■□□□ 1.5
KLHL42-202ENST00000539176 ELOVL7A1L3X0 281 aa24.39■■□□□ 1.5
KLHL42-202ENST00000539176 TLR4O00206 839 aa24.39■■□□□ 1.5
KLHL42-202ENST00000539176 GSTA4O15217 222 aa24.39■■□□□ 1.5
KLHL42-202ENST00000539176 SCELO95171 688 aa24.39■■□□□ 1.5
KLHL42-202ENST00000539176 ZCCHC18P0CG32 403 aa24.39■■□□□ 1.5
KLHL42-202ENST00000539176 CTSEP14091 401 aa24.39■■□□□ 1.5
KLHL42-202ENST00000539176 HSD17B2P37059 387 aa24.39■■□□□ 1.5
KLHL42-202ENST00000539176 CSNK1EP49674 416 aaKnown RBP24.39■■□□□ 1.5
KLHL42-202ENST00000539176 DDX39BQ13838 428 aaKnown RBP24.39■■□□□ 1.5
KLHL42-202ENST00000539176 ARHGAP19Q14CB8 494 aa24.39■■□□□ 1.5
KLHL42-202ENST00000539176 NRF1Q16656 503 aa24.39■■□□□ 1.5
KLHL42-202ENST00000539176 HIST2H2ACQ16777 129 aaPredicted RBP24.39■■□□□ 1.5
KLHL42-202ENST00000539176 FAM98BQ52LJ0 330 aaKnown RBP24.39■■□□□ 1.5
KLHL42-202ENST00000539176 PRAMEF13Q5VWM6 474 aa24.39■■□□□ 1.5
KLHL42-202ENST00000539176 HIST2H2AA3Q6FI13 130 aa24.39■■□□□ 1.5
KLHL42-202ENST00000539176 DNAJC14Q6Y2X3 702 aaPredicted RBP24.39■■□□□ 1.5
KLHL42-202ENST00000539176 TAF8Q7Z7C8 310 aa24.39■■□□□ 1.5
KLHL42-202ENST00000539176 OR10A6Q8NH74 314 aa24.39■■□□□ 1.5
KLHL42-202ENST00000539176 HUS1BQ8NHY5 278 aa24.39■■□□□ 1.5
KLHL42-202ENST00000539176 FAM174AQ8TBP5 190 aa24.39■■□□□ 1.5
KLHL42-202ENST00000539176 UBE2E3Q969T4 207 aa24.39■■□□□ 1.5
KLHL42-202ENST00000539176 DUSP15Q9H1R2 295 aaPredicted RBP24.39■■□□□ 1.5
KLHL42-202ENST00000539176 SIRT5Q9NXA8 310 aa24.39■■□□□ 1.5
KLHL42-202ENST00000539176 SPATA7Q9P0W8 599 aa24.39■■□□□ 1.5
KLHL42-202ENST00000539176 APOBEC3BQ9UH17 382 aaKnown RBP24.39■■□□□ 1.5
KLHL42-202ENST00000539176 PCOLCE2Q9UKZ9 415 aa24.39■■□□□ 1.5
KLHL42-202ENST00000539176 USP22Q9UPT9 525 aa24.39■■□□□ 1.5
KLHL42-202ENST00000539176 ICKQ9UPZ9 632 aa24.39■■□□□ 1.5
KLHL42-202ENST00000539176 TSC22D4Q9Y3Q8 395 aa24.39■■□□□ 1.5
KLHL42-202ENST00000539176 LDLRP01130 860 aa24.38■■□□□ 1.49
KLHL42-202ENST00000539176 C1GALT1C1LP0DN25 315 aa24.38■■□□□ 1.49
KLHL42-202ENST00000539176 HOXA6P31267 233 aa24.38■■□□□ 1.49
KLHL42-202ENST00000539176 SLC19A1P41440 591 aa24.38■■□□□ 1.49
KLHL42-202ENST00000539176 PGS1Q32NB8 556 aa24.38■■□□□ 1.49
KLHL42-202ENST00000539176 PRRT3Q5FWE3 981 aa24.38■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms