RNA–Protein interactions for RNA: ENST00000538253.5

PTPN22-211, Transcript of protein tyrosine phosphatase, non-receptor type 22, humanhuman

TSL 1 (best) BASIC

Gene PTPN22, Length 3,575 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN22-211ENST00000538253 TMPRSS3P57727 454 aa3.44□□□□□ -1.86
PTPN22-211ENST00000538253 DNAJB13P59910 316 aa3.44□□□□□ -1.86
PTPN22-211ENST00000538253 CCL7P80098 99 aa3.44□□□□□ -1.86
PTPN22-211ENST00000538253 GALNT1Q10472 559 aaPredicted RBP3.44□□□□□ -1.86
PTPN22-211ENST00000538253 FOXC1Q12948 553 aa3.44□□□□□ -1.86
PTPN22-211ENST00000538253 CTBP1Q13363 440 aa3.44□□□□□ -1.86
PTPN22-211ENST00000538253 TUBB3Q13509 450 aa3.44□□□□□ -1.86
PTPN22-211ENST00000538253 TSTA3Q13630 321 aaPredicted RBP3.44□□□□□ -1.86
PTPN22-211ENST00000538253 SERTAD2Q14140 314 aa3.44□□□□□ -1.86
PTPN22-211ENST00000538253 FAM53BQ14153 422 aa3.44□□□□□ -1.86
PTPN22-211ENST00000538253 SPCS2Q15005 226 aa3.44□□□□□ -1.86
PTPN22-211ENST00000538253 PCBP2Q15366 365 aaKnown RBP eCLIP3.44□□□□□ -1.86
PTPN22-211ENST00000538253 AARDQ4LEZ3 155 aa3.44□□□□□ -1.86
PTPN22-211ENST00000538253 CCDC157Q569K6 752 aa3.44□□□□□ -1.86
PTPN22-211ENST00000538253 CLVS2Q5SYC1 327 aa3.44□□□□□ -1.86
PTPN22-211ENST00000538253 RNF220Q5VTB9 566 aa3.44□□□□□ -1.86
PTPN22-211ENST00000538253 SHEQ5VZ18 495 aa3.44□□□□□ -1.86
PTPN22-211ENST00000538253 LIN54Q6MZP7 749 aa3.44□□□□□ -1.86
PTPN22-211ENST00000538253 JMJD6Q6NYC1 403 aaPredicted RBP3.44□□□□□ -1.86
PTPN22-211ENST00000538253 ZDHHC24Q6UX98 284 aa3.44□□□□□ -1.86
PTPN22-211ENST00000538253 ANGPTL8Q6UXH0 198 aa3.44□□□□□ -1.86
PTPN22-211ENST00000538253 DND1Q8IYX4 353 aaKnown RBP3.44□□□□□ -1.86
PTPN22-211ENST00000538253 NLGN4XQ8N0W4 816 aa3.44□□□□□ -1.86
PTPN22-211ENST00000538253 NAGSQ8N159 534 aa3.44□□□□□ -1.86
PTPN22-211ENST00000538253 D2HGDHQ8N465 521 aa3.44□□□□□ -1.86
PTPN22-211ENST00000538253 NETO2Q8NC67 525 aa3.44□□□□□ -1.86
PTPN22-211ENST00000538253 PSD4Q8NDX1 1056 aa3.44□□□□□ -1.86
PTPN22-211ENST00000538253 NLGN4YQ8NFZ3 816 aaPredicted RBP3.44□□□□□ -1.86
PTPN22-211ENST00000538253 ZFP28Q8NHY6 868 aa3.44□□□□□ -1.86
PTPN22-211ENST00000538253 CD200R1Q8TD46 325 aa3.44□□□□□ -1.86
PTPN22-211ENST00000538253 APOPT1Q96IL0 206 aa3.44□□□□□ -1.86
PTPN22-211ENST00000538253 AGAP2Q99490 1192 aa3.44□□□□□ -1.86
PTPN22-211ENST00000538253 ZBTB18Q99592 522 aa3.44□□□□□ -1.86
PTPN22-211ENST00000538253 C10orf88Q9H8K7 445 aa3.44□□□□□ -1.86
PTPN22-211ENST00000538253 LRRC4CQ9HCJ2 640 aa3.44□□□□□ -1.86
PTPN22-211ENST00000538253 MKKSQ9NPJ1 570 aaPredicted RBP3.44□□□□□ -1.86
PTPN22-211ENST00000538253 PRDM8Q9NQV8 689 aa3.44□□□□□ -1.86
PTPN22-211ENST00000538253 TMEM45AQ9NWC5 275 aa3.44□□□□□ -1.86
PTPN22-211ENST00000538253 TRPS1Q9UHF7 1281 aa3.44□□□□□ -1.86
PTPN22-211ENST00000538253 RUVBL2Q9Y230 463 aaKnown RBP3.44□□□□□ -1.86
PTPN22-211ENST00000538253 KCTD3Q9Y597 815 aa3.44□□□□□ -1.86
PTPN22-211ENST00000538253 TTC24A2A3L6 582 aaPredicted RBP3.43□□□□□ -1.86
PTPN22-211ENST00000538253 PRR19A6NJB7 356 aa3.43□□□□□ -1.86
PTPN22-211ENST00000538253 TRPC5OSA6NMA1 111 aa3.43□□□□□ -1.86
PTPN22-211ENST00000538253 EFCAB7A8K855 629 aa3.43□□□□□ -1.86
PTPN22-211ENST00000538253 PATE3B3GLJ2 98 aa3.43□□□□□ -1.86
PTPN22-211ENST00000538253 TMEM150CB9EJG8 249 aa3.43□□□□□ -1.86
PTPN22-211ENST00000538253 PLOD2O00469 737 aa3.43□□□□□ -1.86
PTPN22-211ENST00000538253 NPHS1O60500 1241 aa3.43□□□□□ -1.86
PTPN22-211ENST00000538253 SHOX2O60902 331 aaPredicted RBP3.43□□□□□ -1.86
PTPN22-211ENST00000538253 BCAS2O75934 225 aaPredicted RBP3.43□□□□□ -1.86
PTPN22-211ENST00000538253 OR2B3O76000 313 aa3.43□□□□□ -1.86
PTPN22-211ENST00000538253 AHSGP02765 367 aa3.43□□□□□ -1.86
PTPN22-211ENST00000538253 C2P06681 752 aa3.43□□□□□ -1.86
PTPN22-211ENST00000538253 EBLN1P0CF75 366 aa3.43□□□□□ -1.86
PTPN22-211ENST00000538253 C1GALT1C1LP0DN25 315 aa3.43□□□□□ -1.86
PTPN22-211ENST00000538253 GM2AP17900 193 aa3.43□□□□□ -1.86
PTPN22-211ENST00000538253 TFEBP19484 476 aa3.43□□□□□ -1.86
PTPN22-211ENST00000538253 CCR7P32248 378 aa3.43□□□□□ -1.86
PTPN22-211ENST00000538253 IFNA8P32881 189 aa3.43□□□□□ -1.86
PTPN22-211ENST00000538253 GGT5P36269 586 aa3.43□□□□□ -1.86
PTPN22-211ENST00000538253 BUD31P41223 144 aaPredicted RBP3.43□□□□□ -1.86
PTPN22-211ENST00000538253 MAZP56270 477 aaKnown RBP3.43□□□□□ -1.86
PTPN22-211ENST00000538253 BNC1Q01954 994 aa3.43□□□□□ -1.86
PTPN22-211ENST00000538253 ZFP36L1Q07352 338 aaKnown RBP3.43□□□□□ -1.86
PTPN22-211ENST00000538253 GPR18Q14330 331 aa3.43□□□□□ -1.86
PTPN22-211ENST00000538253 IMPG1Q17R60 797 aa3.43□□□□□ -1.86
PTPN22-211ENST00000538253 AP5B1Q2VPB7 878 aa3.43□□□□□ -1.86
PTPN22-211ENST00000538253 PLA2G4EQ3MJ16 856 aa3.43□□□□□ -1.86
PTPN22-211ENST00000538253 GGTA1PQ4G0N0 100 aa3.43□□□□□ -1.86
PTPN22-211ENST00000538253 IL23RQ5VWK5 629 aa3.43□□□□□ -1.86
PTPN22-211ENST00000538253 ATG9BQ674R7 924 aa3.43□□□□□ -1.86
PTPN22-211ENST00000538253 MBOAT1Q6ZNC8 495 aa3.43□□□□□ -1.86
PTPN22-211ENST00000538253 R3HCC1LQ7Z5L2 792 aaKnown RBP3.43□□□□□ -1.86
PTPN22-211ENST00000538253 YTHDF3Q7Z739 585 aaKnown RBP3.43□□□□□ -1.86
PTPN22-211ENST00000538253 ASPGQ86U10 573 aa3.43□□□□□ -1.86
PTPN22-211ENST00000538253 STK32CQ86UX6 486 aa3.43□□□□□ -1.86
PTPN22-211ENST00000538253 PIANPQ8IYJ0 282 aa3.43□□□□□ -1.86
PTPN22-211ENST00000538253 IL22RA1Q8N6P7 574 aa3.43□□□□□ -1.86
PTPN22-211ENST00000538253 CCNYL1Q8N7R7 359 aa3.43□□□□□ -1.86
PTPN22-211ENST00000538253 Q8N9G6 341 aaPredicted RBP3.43□□□□□ -1.86
PTPN22-211ENST00000538253 MFSD9Q8NBP5 474 aa3.43□□□□□ -1.86
PTPN22-211ENST00000538253 OR4E2Q8NGC2 313 aa3.43□□□□□ -1.86
PTPN22-211ENST00000538253 OR56A3Q8NH54 315 aa3.43□□□□□ -1.86
PTPN22-211ENST00000538253 POP5Q969H6 163 aaKnown RBP3.43□□□□□ -1.86
PTPN22-211ENST00000538253 GAL3ST3Q96A11 431 aa3.43□□□□□ -1.86
PTPN22-211ENST00000538253 TGM7Q96PF1 710 aa3.43□□□□□ -1.86
PTPN22-211ENST00000538253 TRAPPC9Q96Q05 1148 aa3.43□□□□□ -1.86
PTPN22-211ENST00000538253 OR1F2PQ96R84 312 aa3.43□□□□□ -1.86
PTPN22-211ENST00000538253 SARGQ9BW04 601 aa3.43□□□□□ -1.86
PTPN22-211ENST00000538253 PITPNM3Q9BZ71 974 aa3.43□□□□□ -1.86
PTPN22-211ENST00000538253 NUF2Q9BZD4 464 aa3.43□□□□□ -1.86
PTPN22-211ENST00000538253 ELOVL6Q9H5J4 265 aa3.43□□□□□ -1.86
PTPN22-211ENST00000538253 WDR54Q9H977 334 aa3.43□□□□□ -1.86
PTPN22-211ENST00000538253 ACTR5Q9H9F9 607 aaPredicted RBP3.43□□□□□ -1.86
PTPN22-211ENST00000538253 C3orf14Q9HBI5 128 aa3.43□□□□□ -1.86
PTPN22-211ENST00000538253 SNX15Q9NRS6 342 aa3.43□□□□□ -1.86
PTPN22-211ENST00000538253 SEMA3GQ9NS98 782 aa3.43□□□□□ -1.86
PTPN22-211ENST00000538253 C2orf42Q9NWW7 574 aa3.43□□□□□ -1.86
PTPN22-211ENST00000538253 MRTO4Q9UKD2 239 aaKnown RBP3.43□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms