RNA–Protein interactions for RNA: ENST00000537002.5

PTPRD-213, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 1 (best) BASIC

Gene PTPRD, Length 8,224 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-213ENST00000537002 RACK1P63244 317 aaKnown RBP5.23□□□□□ -1.57
PTPRD-213ENST00000537002 CDC42EP1Q00587 391 aa5.23□□□□□ -1.57
PTPRD-213ENST00000537002 IFITM3Q01628 133 aa5.23□□□□□ -1.57
PTPRD-213ENST00000537002 DCST1Q5T197 706 aa5.23□□□□□ -1.57
PTPRD-213ENST00000537002 ATG9BQ674R7 924 aa5.23□□□□□ -1.57
PTPRD-213ENST00000537002 ANKRD54Q6NXT1 300 aa5.23□□□□□ -1.57
PTPRD-213ENST00000537002 SLC27A1Q6PCB7 646 aa5.23□□□□□ -1.57
PTPRD-213ENST00000537002 PRSS42Q7Z5A4 293 aa5.23□□□□□ -1.57
PTPRD-213ENST00000537002 RIMKLAQ8IXN7 391 aa5.23□□□□□ -1.57
PTPRD-213ENST00000537002 LINC00469Q8N7U9 141 aa5.23□□□□□ -1.57
PTPRD-213ENST00000537002 TRIM43Q96BQ3 446 aaPredicted RBP5.23□□□□□ -1.57
PTPRD-213ENST00000537002 FCRL3Q96P31 734 aaPredicted RBP5.23□□□□□ -1.57
PTPRD-213ENST00000537002 TBX5Q99593 518 aa5.23□□□□□ -1.57
PTPRD-213ENST00000537002 FUZQ9BT04 418 aa5.23□□□□□ -1.57
PTPRD-213ENST00000537002 ASB8Q9H765 288 aa5.23□□□□□ -1.57
PTPRD-213ENST00000537002 AGO3Q9H9G7 860 aaKnown RBP5.23□□□□□ -1.57
PTPRD-213ENST00000537002 NTN4Q9HB63 628 aa5.23□□□□□ -1.57
PTPRD-213ENST00000537002 SMPD4Q9NXE4 827 aa5.23□□□□□ -1.57
PTPRD-213ENST00000537002 NLKQ9UBE8 527 aa5.23□□□□□ -1.57
PTPRD-213ENST00000537002 AUP1Q9Y679 476 aa5.23□□□□□ -1.57
PTPRD-213ENST00000537002 ARVCFO00192 962 aa5.23□□□□□ -1.57
PTPRD-213ENST00000537002 SLC28A2O43868 658 aa5.23□□□□□ -1.57
PTPRD-213ENST00000537002 NR2F1P10589 423 aa5.23□□□□□ -1.57
PTPRD-213ENST00000537002 G6PDP11413 515 aa5.23□□□□□ -1.57
PTPRD-213ENST00000537002 ZNF30P17039 623 aa5.23□□□□□ -1.57
PTPRD-213ENST00000537002 KELP23276 732 aa5.23□□□□□ -1.57
PTPRD-213ENST00000537002 ADRA1BP35368 520 aa5.23□□□□□ -1.57
PTPRD-213ENST00000537002 CD300CQ08708 224 aa5.23□□□□□ -1.57
PTPRD-213ENST00000537002 ZMYND11Q15326 602 aa5.23□□□□□ -1.57
PTPRD-213ENST00000537002 CRY2Q49AN0 593 aa5.23□□□□□ -1.57
PTPRD-213ENST00000537002 NOMO2Q5JPE7 1267 aa5.23□□□□□ -1.57
PTPRD-213ENST00000537002 MPP7Q5T2T1 576 aa5.23□□□□□ -1.57
PTPRD-213ENST00000537002 MSANTD2Q6P1R3 559 aa5.23□□□□□ -1.57
PTPRD-213ENST00000537002 RDH10Q8IZV5 341 aa5.23□□□□□ -1.57
PTPRD-213ENST00000537002 OXR1Q8N573 874 aa5.23□□□□□ -1.57
PTPRD-213ENST00000537002 CELF2-AS1Q8N7Q2 184 aa5.23□□□□□ -1.57
PTPRD-213ENST00000537002 GPRC5AQ8NFJ5 357 aa5.23□□□□□ -1.57
PTPRD-213ENST00000537002 FRS2Q8WU20 508 aa5.23□□□□□ -1.57
PTPRD-213ENST00000537002 ASB13Q8WXK3 278 aa5.23□□□□□ -1.57
PTPRD-213ENST00000537002 C1orf74Q96LT6 269 aa5.23□□□□□ -1.57
PTPRD-213ENST00000537002 TEFMQ96QE5 360 aaKnown RBP5.23□□□□□ -1.57
PTPRD-213ENST00000537002 COPS8Q99627 209 aa5.23□□□□□ -1.57
PTPRD-213ENST00000537002 C7orf50Q9BRJ6 194 aaKnown RBP5.23□□□□□ -1.57
PTPRD-213ENST00000537002 ZNF275Q9NSD4 429 aaPredicted RBP5.23□□□□□ -1.57
PTPRD-213ENST00000537002 HCN2Q9UL51 889 aa5.23□□□□□ -1.57
PTPRD-213ENST00000537002 ZNF451Q9Y4E5 1061 aa5.23□□□□□ -1.57
PTPRD-213ENST00000537002 PCDHGB7Q9Y5F8 929 aa5.23□□□□□ -1.57
PTPRD-213ENST00000537002 GIMAP1-GIMAP5A0A087WTJ2 511 aa5.23□□□□□ -1.57
PTPRD-213ENST00000537002 CREG1O75629 220 aa5.23□□□□□ -1.57
PTPRD-213ENST00000537002 ZNF432O94892 652 aa5.23□□□□□ -1.57
PTPRD-213ENST00000537002 CTPS1P17812 591 aa5.23□□□□□ -1.57
PTPRD-213ENST00000537002 MAOBP27338 520 aa5.23□□□□□ -1.57
PTPRD-213ENST00000537002 FAUP35544 74 aaKnown RBP5.23□□□□□ -1.57
PTPRD-213ENST00000537002 OR1G1P47890 313 aa5.23□□□□□ -1.57
PTPRD-213ENST00000537002 ST3GAL4Q11206 333 aa5.23□□□□□ -1.57
PTPRD-213ENST00000537002 ADAM15Q13444 863 aa5.23□□□□□ -1.57
PTPRD-213ENST00000537002 DSC3Q14574 896 aa5.23□□□□□ -1.57
PTPRD-213ENST00000537002 BCL7AQ4VC05 210 aa5.23□□□□□ -1.57
PTPRD-213ENST00000537002 ELP2Q6IA86 826 aa5.23□□□□□ -1.57
PTPRD-213ENST00000537002 FAM220AQ7Z4H9 259 aa5.23□□□□□ -1.57
PTPRD-213ENST00000537002 PHACTR4Q8IZ21 702 aa5.23□□□□□ -1.57
PTPRD-213ENST00000537002 SLC38A6Q8IZM9 456 aa5.23□□□□□ -1.57
PTPRD-213ENST00000537002 FAM83FQ8NEG4 500 aaPredicted RBP5.23□□□□□ -1.57
PTPRD-213ENST00000537002 GIMAP5Q96F15 307 aa5.23□□□□□ -1.57
PTPRD-213ENST00000537002 PYURFQ96I23 114 aa5.23□□□□□ -1.57
PTPRD-213ENST00000537002 EGLN2Q96KS0 407 aa5.23□□□□□ -1.57
PTPRD-213ENST00000537002 TMEM209Q96SK2 561 aa5.23□□□□□ -1.57
PTPRD-213ENST00000537002 AKAP7Q9P0M2 348 aaPredicted RBP5.23□□□□□ -1.57
PTPRD-213ENST00000537002 DNMT3AQ9Y6K1 912 aaPredicted RBP5.23□□□□□ -1.57
PTPRD-213ENST00000537002 PRSS44E7EML9 344 aa5.23□□□□□ -1.57
PTPRD-213ENST00000537002 ATP6V1G2-DDX39BF2Z307 99 aa5.23□□□□□ -1.57
PTPRD-213ENST00000537002 FXYD1O00168 92 aa5.23□□□□□ -1.57
PTPRD-213ENST00000537002 PER2O15055 1255 aa5.23□□□□□ -1.57
PTPRD-213ENST00000537002 NDUFA2O43678 99 aa5.23□□□□□ -1.57
PTPRD-213ENST00000537002 PRKYO43930 277 aa5.23□□□□□ -1.57
PTPRD-213ENST00000537002 IL1AP01583 271 aa5.23□□□□□ -1.57
PTPRD-213ENST00000537002 UBA1P22314 1058 aaKnown RBP5.23□□□□□ -1.57
PTPRD-213ENST00000537002 RAG2P55895 527 aa5.23□□□□□ -1.57
PTPRD-213ENST00000537002 HMGCS1Q01581 520 aa5.23□□□□□ -1.57
PTPRD-213ENST00000537002 OCLNQ16625 522 aa5.23□□□□□ -1.57
PTPRD-213ENST00000537002 DPY19L1Q2PZI1 675 aa5.23□□□□□ -1.57
PTPRD-213ENST00000537002 CAMKVQ8NCB2 501 aa5.23□□□□□ -1.57
PTPRD-213ENST00000537002 HJURPQ8NCD3 748 aaPredicted RBP5.23□□□□□ -1.57
PTPRD-213ENST00000537002 ASB15Q8WXK1 588 aa5.23□□□□□ -1.57
PTPRD-213ENST00000537002 TMEM159Q96B96 161 aa5.23□□□□□ -1.57
PTPRD-213ENST00000537002 PPCDCQ96CD2 204 aa5.23□□□□□ -1.57
PTPRD-213ENST00000537002 CSF3RQ99062 836 aa5.23□□□□□ -1.57
PTPRD-213ENST00000537002 BCO2Q9BYV7 579 aa5.23□□□□□ -1.57
PTPRD-213ENST00000537002 GPR83Q9NYM4 423 aa5.23□□□□□ -1.57
PTPRD-213ENST00000537002 STOX2Q9P2F5 926 aaPredicted RBP5.23□□□□□ -1.57
PTPRD-213ENST00000537002 PCDHB5Q9Y5E4 795 aa5.23□□□□□ -1.57
PTPRD-213ENST00000537002 ECI2O75521 394 aa5.22□□□□□ -1.57
PTPRD-213ENST00000537002 B3GAT3O94766 335 aa5.22□□□□□ -1.57
PTPRD-213ENST00000537002 LDOC1O95751 146 aaPredicted RBP5.22□□□□□ -1.57
PTPRD-213ENST00000537002 GNRH1P01148 92 aa5.22□□□□□ -1.57
PTPRD-213ENST00000537002 IFNA4P05014 189 aa5.22□□□□□ -1.57
PTPRD-213ENST00000537002 PRKCGP05129 697 aa5.22□□□□□ -1.57
PTPRD-213ENST00000537002 SLC35E2BP0CK96 405 aa5.22□□□□□ -1.57
PTPRD-213ENST00000537002 ZP3P21754 424 aa5.22□□□□□ -1.57
PTPRD-213ENST00000537002 PSMA6P60900 246 aaKnown RBP5.22□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms