RNA–Protein interactions for RNA: ENST00000535906.1

VPS33B-202, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 2 BASIC

Gene VPS33B, Length 2,420 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-202ENST00000535906 NOL3O60936 208 aaKnown RBP12.86□□□□□ -0.35
VPS33B-202ENST00000535906 PCCBP05166 539 aa12.86□□□□□ -0.35
VPS33B-202ENST00000535906 MATN1P21941 496 aa12.86□□□□□ -0.35
VPS33B-202ENST00000535906 GSTM2P28161 218 aa12.86□□□□□ -0.35
VPS33B-202ENST00000535906 ENTPD1P49961 510 aa12.86□□□□□ -0.35
VPS33B-202ENST00000535906 CCR3P51677 355 aa12.86□□□□□ -0.35
VPS33B-202ENST00000535906 TPD52P55327 224 aaPredicted RBP12.86□□□□□ -0.35
VPS33B-202ENST00000535906 TAS2R38P59533 333 aa12.86□□□□□ -0.35
VPS33B-202ENST00000535906 GABARAPL2P60520 117 aa12.86□□□□□ -0.35
VPS33B-202ENST00000535906 KCNAB2Q13303 367 aa12.86□□□□□ -0.35
VPS33B-202ENST00000535906 NUMA1Q14980 2115 aa12.86□□□□□ -0.35
VPS33B-202ENST00000535906 FGD3Q5JSP0 725 aa12.86□□□□□ -0.35
VPS33B-202ENST00000535906 C6orf141Q5SZD1 244 aa12.86□□□□□ -0.35
VPS33B-202ENST00000535906 NXPE4Q6UWF7 544 aa12.86□□□□□ -0.35
VPS33B-202ENST00000535906 COMMD6Q7Z4G1 85 aa12.86□□□□□ -0.35
VPS33B-202ENST00000535906 CAMKMTQ7Z624 323 aa12.86□□□□□ -0.35
VPS33B-202ENST00000535906 DNAJC5GQ8N7S2 189 aa12.86□□□□□ -0.35
VPS33B-202ENST00000535906 CHDHQ8NE62 594 aaPredicted RBP12.86□□□□□ -0.35
VPS33B-202ENST00000535906 STARD8Q92502 1023 aa12.86□□□□□ -0.35
VPS33B-202ENST00000535906 RAB7BQ96AH8 199 aa12.86□□□□□ -0.35
VPS33B-202ENST00000535906 COQ8BQ96D53 544 aa12.86□□□□□ -0.35
VPS33B-202ENST00000535906 NRBF2Q96F24 287 aa12.86□□□□□ -0.35
VPS33B-202ENST00000535906 DMRT3Q9NQL9 472 aa12.86□□□□□ -0.35
VPS33B-202ENST00000535906 CCDC177Q9NQR7 707 aaPredicted RBP12.86□□□□□ -0.35
VPS33B-202ENST00000535906 SH3BP4Q9P0V3 963 aa12.86□□□□□ -0.35
VPS33B-202ENST00000535906 C1orf226A1L170 272 aa12.85□□□□□ -0.35
VPS33B-202ENST00000535906 MID1O15344 667 aa12.85□□□□□ -0.35
VPS33B-202ENST00000535906 IL7RP16871 459 aa12.85□□□□□ -0.35
VPS33B-202ENST00000535906 MAGEA2P43356 314 aa12.85□□□□□ -0.35
VPS33B-202ENST00000535906 WSCD2Q2TBF2 565 aa12.85□□□□□ -0.35
VPS33B-202ENST00000535906 ZNF385BQ569K4 471 aa12.85□□□□□ -0.35
VPS33B-202ENST00000535906 IER5LQ5T953 404 aa12.85□□□□□ -0.35
VPS33B-202ENST00000535906 CPZQ66K79 652 aa12.85□□□□□ -0.35
VPS33B-202ENST00000535906 ADAMTSL4Q6UY14 1074 aa12.85□□□□□ -0.35
VPS33B-202ENST00000535906 AMZ2Q86W34 360 aa12.85□□□□□ -0.35
VPS33B-202ENST00000535906 ZDHHC21Q8IVQ6 265 aa12.85□□□□□ -0.35
VPS33B-202ENST00000535906 CPA6Q8N4T0 437 aa12.85□□□□□ -0.35
VPS33B-202ENST00000535906 PUM2Q8TB72 1066 aaKnown RBP eCLIP12.85□□□□□ -0.358e-9■■■■■ 57.4
VPS33B-202ENST00000535906 EHD1Q9H4M9 534 aa12.85□□□□□ -0.35
VPS33B-202ENST00000535906 VNN3Q9NY84 501 aa12.85□□□□□ -0.35
VPS33B-202ENST00000535906 BTNL2Q9UIR0 455 aa12.85□□□□□ -0.35
VPS33B-202ENST00000535906 BLOC1S6Q9UL45 172 aa12.85□□□□□ -0.35
VPS33B-202ENST00000535906 SAMD4AQ9UPU9 718 aaKnown RBP12.85□□□□□ -0.35
VPS33B-202ENST00000535906 GMEB1Q9Y692 573 aa12.85□□□□□ -0.35
VPS33B-202ENST00000535906 CFAP20Q9Y6A4 193 aaKnown RBP12.85□□□□□ -0.35
VPS33B-202ENST00000535906 ATG2BQ96BY7 2078 aa12.85□□□□□ -0.35
VPS33B-202ENST00000535906 LOC100130705A0A1B0GUX0 176 aa12.84□□□□□ -0.35
VPS33B-202ENST00000535906 HS6ST1O60243 411 aa12.84□□□□□ -0.35
VPS33B-202ENST00000535906 E2F6O75461 281 aa12.84□□□□□ -0.35
VPS33B-202ENST00000535906 NUDT7P0C024 238 aa12.84□□□□□ -0.35
VPS33B-202ENST00000535906 KDELR2P33947 212 aa12.84□□□□□ -0.35
VPS33B-202ENST00000535906 CDK3Q00526 305 aa12.84□□□□□ -0.35
VPS33B-202ENST00000535906 MC1RQ01726 317 aa12.84□□□□□ -0.35
VPS33B-202ENST00000535906 GAB1Q13480 694 aa12.84□□□□□ -0.35
VPS33B-202ENST00000535906 PAGE2BQ5JRK9 111 aa12.84□□□□□ -0.35
VPS33B-202ENST00000535906 KLHL35Q6PF15 583 aa12.84□□□□□ -0.35
VPS33B-202ENST00000535906 UNC5DQ6UXZ4 953 aa12.84□□□□□ -0.35
VPS33B-202ENST00000535906 PDZD3Q86UT5 571 aa12.84□□□□□ -0.35
VPS33B-202ENST00000535906 HIPK1Q86Z02 1210 aa12.84□□□□□ -0.35
VPS33B-202ENST00000535906 SPARTQ8N0X7 666 aa12.84□□□□□ -0.35
VPS33B-202ENST00000535906 PGBD3Q8N328 593 aa12.84□□□□□ -0.35
VPS33B-202ENST00000535906 WDR48Q8TAF3 677 aa12.84□□□□□ -0.35
VPS33B-202ENST00000535906 SNX19Q92543 992 aa12.84□□□□□ -0.35
VPS33B-202ENST00000535906 TFGQ92734 400 aaPredicted RBP12.84□□□□□ -0.35
VPS33B-202ENST00000535906 ACAT2Q9BWD1 397 aa12.84□□□□□ -0.35
VPS33B-202ENST00000535906 SERGEFQ9UGK8 458 aa12.84□□□□□ -0.35
VPS33B-202ENST00000535906 ABCG2Q9UNQ0 655 aa12.84□□□□□ -0.35
VPS33B-202ENST00000535906 TDRKHQ9Y2W6 561 aaKnown RBP12.84□□□□□ -0.35
VPS33B-202ENST00000535906 SPTBN5Q9NRC6 3674 aaKnown RBP12.84□□□□□ -0.35
VPS33B-202ENST00000535906 KLHL18O94889 574 aa12.84□□□□□ -0.35
VPS33B-202ENST00000535906 HPCAL1P37235 193 aa12.84□□□□□ -0.35
VPS33B-202ENST00000535906 CD47Q08722 323 aa12.84□□□□□ -0.35
VPS33B-202ENST00000535906 ZNF763Q0D2J5 394 aa12.84□□□□□ -0.35
VPS33B-202ENST00000535906 TOP3AQ13472 1001 aaPredicted RBP12.84□□□□□ -0.35
VPS33B-202ENST00000535906 SHHQ15465 462 aa12.84□□□□□ -0.35
VPS33B-202ENST00000535906 HIST2H2ACQ16777 129 aaPredicted RBP12.84□□□□□ -0.35
VPS33B-202ENST00000535906 MEP1AQ16819 746 aa12.84□□□□□ -0.35
VPS33B-202ENST00000535906 CTU2Q2VPK5 515 aaKnown RBP12.84□□□□□ -0.35
VPS33B-202ENST00000535906 RFX4Q33E94 735 aa12.84□□□□□ -0.35
VPS33B-202ENST00000535906 AGBL4Q5VU57 503 aa12.84□□□□□ -0.35
VPS33B-202ENST00000535906 HIST2H2AA3Q6FI13 130 aa12.84□□□□□ -0.35
VPS33B-202ENST00000535906 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP12.84□□□□□ -0.35
VPS33B-202ENST00000535906 VTCN1Q7Z7D3 282 aa12.84□□□□□ -0.35
VPS33B-202ENST00000535906 ARL10Q8N8L6 244 aa12.84□□□□□ -0.35
VPS33B-202ENST00000535906 VPS37AQ8NEZ2 397 aa12.84□□□□□ -0.35
VPS33B-202ENST00000535906 OR4K1Q8NGD4 311 aa12.84□□□□□ -0.35
VPS33B-202ENST00000535906 TBC1D15Q8TC07 691 aa12.84□□□□□ -0.35
VPS33B-202ENST00000535906 RAD51AP1Q96B01 352 aa12.84□□□□□ -0.35
VPS33B-202ENST00000535906 MAGED4Q96JG8 741 aa12.84□□□□□ -0.35
VPS33B-202ENST00000535906 CHST8Q9H2A9 424 aa12.84□□□□□ -0.35
VPS33B-202ENST00000535906 IL1RAPQ9NPH3 570 aa12.84□□□□□ -0.35
VPS33B-202ENST00000535906 FZD4Q9ULV1 537 aa12.84□□□□□ -0.35
VPS33B-202ENST00000535906 STON1Q9Y6Q2 735 aa12.84□□□□□ -0.35
VPS33B-202ENST00000535906 EPOPA6NHQ4 379 aa12.83□□□□□ -0.35
VPS33B-202ENST00000535906 SLC16A6O15403 523 aa12.83□□□□□ -0.35
VPS33B-202ENST00000535906 PI15O43692 258 aa12.83□□□□□ -0.35
VPS33B-202ENST00000535906 PCDH8O95206 1070 aa12.83□□□□□ -0.35
VPS33B-202ENST00000535906 NTRK1P04629 796 aa12.83□□□□□ -0.35
VPS33B-202ENST00000535906 ABCB1P08183 1280 aaPredicted RBP12.83□□□□□ -0.35
VPS33B-202ENST00000535906 CCNA2P20248 432 aa12.83□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms