RNA–Protein interactions for RNA: ENST00000535399.1

SFSWAP-204, Transcript of splicing factor SWAP, humanhuman

TSL 2

Gene SFSWAP, Length 778 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-204ENST00000535399 STX16-NPEPL1H3BU86 382 aa21.57■■□□□ 1.04
SFSWAP-204ENST00000535399 E2F3O00716 465 aa21.57■■□□□ 1.04
SFSWAP-204ENST00000535399 STX16O14662 325 aa21.57■■□□□ 1.04
SFSWAP-204ENST00000535399 SMIM24O75264 130 aa21.57■■□□□ 1.04
SFSWAP-204ENST00000535399 NSA2O95478 260 aaKnown RBP21.57■■□□□ 1.04
SFSWAP-204ENST00000535399 SERPIND1P05546 499 aa21.57■■□□□ 1.04
SFSWAP-204ENST00000535399 UMODP07911 640 aa21.57■■□□□ 1.04
SFSWAP-204ENST00000535399 EPB42P16452 691 aa21.57■■□□□ 1.04
SFSWAP-204ENST00000535399 IL1RNP18510 177 aa21.57■■□□□ 1.04
SFSWAP-204ENST00000535399 FOLR3P41439 243 aa21.57■■□□□ 1.04
SFSWAP-204ENST00000535399 RGS1Q08116 209 aa21.57■■□□□ 1.04
SFSWAP-204ENST00000535399 HYAL2Q12891 473 aa21.57■■□□□ 1.04
SFSWAP-204ENST00000535399 BORAQ6PGQ7 559 aa21.57■■□□□ 1.04
SFSWAP-204ENST00000535399 TTLQ8NG68 377 aa21.57■■□□□ 1.04
SFSWAP-204ENST00000535399 THAP4Q8WY91 577 aa21.57■■□□□ 1.04
SFSWAP-204ENST00000535399 SLC6A16Q9GZN6 736 aa21.57■■□□□ 1.04
SFSWAP-204ENST00000535399 H0YIG0 161 aa21.56■■□□□ 1.04
SFSWAP-204ENST00000535399 PRPF4O43172 522 aaKnown RBP eCLIP21.56■■□□□ 1.049e-7■■■□□ 15.4
SFSWAP-204ENST00000535399 SERPINA6P08185 405 aa21.56■■□□□ 1.04
SFSWAP-204ENST00000535399 GSTA1P08263 222 aa21.56■■□□□ 1.04
SFSWAP-204ENST00000535399 KRT15P19012 456 aa21.56■■□□□ 1.04
SFSWAP-204ENST00000535399 EEF1DP29692 281 aaKnown RBP21.56■■□□□ 1.04
SFSWAP-204ENST00000535399 SSPNQ14714 243 aa21.56■■□□□ 1.04
SFSWAP-204ENST00000535399 GOLGA7Q7Z5G4 137 aa21.56■■□□□ 1.04
SFSWAP-204ENST00000535399 VN1R5Q7Z5H4 357 aa21.56■■□□□ 1.04
SFSWAP-204ENST00000535399 PDSS2Q86YH6 399 aa21.56■■□□□ 1.04
SFSWAP-204ENST00000535399 STT3BQ8TCJ2 826 aa21.56■■□□□ 1.04
SFSWAP-204ENST00000535399 WBP1Q96G27 269 aa21.56■■□□□ 1.04
SFSWAP-204ENST00000535399 AICDAQ9GZX7 198 aa21.56■■□□□ 1.04
SFSWAP-204ENST00000535399 ZNF282Q9UDV7 671 aaPredicted RBP21.56■■□□□ 1.04
SFSWAP-204ENST00000535399 NXT1Q9UKK6 140 aaKnown RBP21.56■■□□□ 1.04
SFSWAP-204ENST00000535399 ANGPTL3Q9Y5C1 460 aa21.56■■□□□ 1.04
SFSWAP-204ENST00000535399 TLDC2A0PJX2 215 aa21.55■■□□□ 1.04
SFSWAP-204ENST00000535399 A8MT66 165 aa21.55■■□□□ 1.04
SFSWAP-204ENST00000535399 FFAR3O14843 346 aa21.55■■□□□ 1.04
SFSWAP-204ENST00000535399 GPR42O15529 346 aa21.55■■□□□ 1.04
SFSWAP-204ENST00000535399 KLHL18O94889 574 aa21.55■■□□□ 1.04
SFSWAP-204ENST00000535399 GSTM2P28161 218 aa21.55■■□□□ 1.04
SFSWAP-204ENST00000535399 AVPR1BP47901 424 aa21.55■■□□□ 1.04
SFSWAP-204ENST00000535399 MAT1AQ00266 395 aaKnown RBP21.55■■□□□ 1.04
SFSWAP-204ENST00000535399 LAPTM5Q13571 262 aa21.55■■□□□ 1.04
SFSWAP-204ENST00000535399 GTF2H2Q13888 395 aa21.55■■□□□ 1.04
SFSWAP-204ENST00000535399 SYT16Q17RD7 645 aa21.55■■□□□ 1.04
SFSWAP-204ENST00000535399 PAGE2BQ5JRK9 111 aa21.55■■□□□ 1.04
SFSWAP-204ENST00000535399 GTF2H2CQ6P1K8 395 aa21.55■■□□□ 1.04
SFSWAP-204ENST00000535399 RIBC1Q8N443 379 aaPredicted RBP21.55■■□□□ 1.04
SFSWAP-204ENST00000535399 UTP15Q8TED0 518 aaKnown RBP21.55■■□□□ 1.04
SFSWAP-204ENST00000535399 SEC16BQ96JE7 1060 aa21.55■■□□□ 1.04
SFSWAP-204ENST00000535399 BBC3Q96PG8 261 aaPredicted RBP21.55■■□□□ 1.04
SFSWAP-204ENST00000535399 RHBGQ9H310 441 aa21.55■■□□□ 1.04
SFSWAP-204ENST00000535399 KLHL31Q9H511 634 aa21.55■■□□□ 1.04
SFSWAP-204ENST00000535399 SOX17Q9H6I2 414 aaPredicted RBP21.55■■□□□ 1.04
SFSWAP-204ENST00000535399 ANKHQ9HCJ1 492 aa21.55■■□□□ 1.04
SFSWAP-204ENST00000535399 TRPC4Q9UBN4 977 aa21.55■■□□□ 1.04
SFSWAP-204ENST00000535399 DCDC2Q9UHG0 476 aa21.55■■□□□ 1.04
SFSWAP-204ENST00000535399 MAP4K5Q9Y4K4 846 aa21.55■■□□□ 1.04
SFSWAP-204ENST00000535399 KCNMB2Q9Y691 235 aa21.55■■□□□ 1.04
SFSWAP-204ENST00000535399 ATMQ13315 3056 aa21.54■■□□□ 1.04
SFSWAP-204ENST00000535399 SGK494L7N484 410 aa21.54■■□□□ 1.04
SFSWAP-204ENST00000535399 ATXN7O15265 892 aaPredicted RBP21.54■■□□□ 1.04
SFSWAP-204ENST00000535399 TBX6O95947 436 aaPredicted RBP21.54■■□□□ 1.04
SFSWAP-204ENST00000535399 ZGLP1P0C6A0 271 aa21.54■■□□□ 1.04
SFSWAP-204ENST00000535399 SMIM10L1P0DMW3 83 aa21.54■■□□□ 1.04
SFSWAP-204ENST00000535399 OTX2P32243 289 aa21.54■■□□□ 1.04
SFSWAP-204ENST00000535399 PIK3CGP48736 1102 aa21.54■■□□□ 1.04
SFSWAP-204ENST00000535399 OCA2Q04671 838 aa21.54■■□□□ 1.04
SFSWAP-204ENST00000535399 IFFO1Q0D2I5 559 aa21.54■■□□□ 1.04
SFSWAP-204ENST00000535399 HERC3Q15034 1050 aa21.54■■□□□ 1.04
SFSWAP-204ENST00000535399 VWA2Q5GFL6 755 aa21.54■■□□□ 1.04
SFSWAP-204ENST00000535399 ADNP2Q6IQ32 1131 aa21.54■■□□□ 1.04
SFSWAP-204ENST00000535399 SHISA6Q6ZSJ9 500 aa21.54■■□□□ 1.04
SFSWAP-204ENST00000535399 SHISA5Q8N114 240 aa21.54■■□□□ 1.04
SFSWAP-204ENST00000535399 APOBEC4Q8WW27 367 aaKnown RBP21.54■■□□□ 1.04
SFSWAP-204ENST00000535399 MIEF2Q96C03 454 aa21.54■■□□□ 1.04
SFSWAP-204ENST00000535399 SMIM10Q96HG1 83 aa21.54■■□□□ 1.04
SFSWAP-204ENST00000535399 ROPN1BQ9BZX4 212 aaPredicted RBP21.54■■□□□ 1.04
SFSWAP-204ENST00000535399 ROPN1Q9HAT0 212 aaPredicted RBP21.54■■□□□ 1.04
SFSWAP-204ENST00000535399 LGALS13Q9UHV8 139 aa21.54■■□□□ 1.04
SFSWAP-204ENST00000535399 PCTPQ9UKL6 214 aa21.54■■□□□ 1.04
SFSWAP-204ENST00000535399 EMCNQ9ULC0 261 aa21.54■■□□□ 1.04
SFSWAP-204ENST00000535399 MAN2B2Q9Y2E5 1009 aa21.54■■□□□ 1.04
SFSWAP-204ENST00000535399 NAALAD2Q9Y3Q0 740 aa21.54■■□□□ 1.04
SFSWAP-204ENST00000535399 CLEC3AO75596 197 aa21.53■■□□□ 1.04
SFSWAP-204ENST00000535399 B3GALT4O96024 378 aa21.53■■□□□ 1.04
SFSWAP-204ENST00000535399 RPS17P08708 135 aaKnown RBP21.53■■□□□ 1.04
SFSWAP-204ENST00000535399 ZNF888P0CJ79 500 aaPredicted RBP21.53■■□□□ 1.04
SFSWAP-204ENST00000535399 ALOX12P18054 663 aa21.53■■□□□ 1.04
SFSWAP-204ENST00000535399 HIST2H2ACQ16777 129 aaPredicted RBP21.53■■□□□ 1.04
SFSWAP-204ENST00000535399 TOR1AIP1Q5JTV8 583 aa21.53■■□□□ 1.04
SFSWAP-204ENST00000535399 HIST2H2AA3Q6FI13 130 aa21.53■■□□□ 1.04
SFSWAP-204ENST00000535399 GRHL2Q6ISB3 625 aa21.53■■□□□ 1.04
SFSWAP-204ENST00000535399 PPP1R32Q7Z5V6 425 aa21.53■■□□□ 1.04
SFSWAP-204ENST00000535399 MRGPREQ86SM8 312 aa21.53■■□□□ 1.04
SFSWAP-204ENST00000535399 RAB43Q86YS6 212 aa21.53■■□□□ 1.04
SFSWAP-204ENST00000535399 ZC3H7AQ8IWR0 971 aaKnown RBP21.53■■□□□ 1.04
SFSWAP-204ENST00000535399 PRSS58Q8IYP2 241 aa21.53■■□□□ 1.04
SFSWAP-204ENST00000535399 EXD3Q8N9H8 876 aa21.53■■□□□ 1.04
SFSWAP-204ENST00000535399 NSUN5Q96P11 429 aaKnown RBP21.53■■□□□ 1.04
SFSWAP-204ENST00000535399 TMEM109Q9BVC6 243 aa21.53■■□□□ 1.04
SFSWAP-204ENST00000535399 YIPF2Q9BWQ6 316 aa21.53■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms