RNA–Protein interactions for RNA: ENST00000534442.5

ECHDC1-223, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 577 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-223ENST00000534442 RAD1O60671 282 aa4.3□□□□□ -1.72
ECHDC1-223ENST00000534442 SURF6O75683 361 aaKnown RBP4.3□□□□□ -1.72
ECHDC1-223ENST00000534442 PSMD10O75832 226 aa4.3□□□□□ -1.72
ECHDC1-223ENST00000534442 SEMA4FO95754 770 aa4.3□□□□□ -1.72
ECHDC1-223ENST00000534442 HIST1H2ABP04908 130 aa4.3□□□□□ -1.72
ECHDC1-223ENST00000534442 IGHV4-34P06331 123 aa4.3□□□□□ -1.72
ECHDC1-223ENST00000534442 GOLGA8HP0CJ92 632 aa4.3□□□□□ -1.72
ECHDC1-223ENST00000534442 ALPPL2P10696 532 aa4.3□□□□□ -1.72
ECHDC1-223ENST00000534442 G6PDP11413 515 aa4.3□□□□□ -1.72
ECHDC1-223ENST00000534442 HIST1H2ADP20671 130 aa4.3□□□□□ -1.72
ECHDC1-223ENST00000534442 KELP23276 732 aa4.3□□□□□ -1.72
ECHDC1-223ENST00000534442 MRPS34P82930 218 aaKnown RBP4.3□□□□□ -1.72
ECHDC1-223ENST00000534442 ECT2LQ008S8 904 aa4.3□□□□□ -1.72
ECHDC1-223ENST00000534442 SPOCK1Q08629 439 aa4.3□□□□□ -1.72
ECHDC1-223ENST00000534442 TRAF1Q13077 416 aa4.3□□□□□ -1.72
ECHDC1-223ENST00000534442 SYCP1Q15431 976 aa4.3□□□□□ -1.72
ECHDC1-223ENST00000534442 IGSF11Q5DX21 431 aa4.3□□□□□ -1.72
ECHDC1-223ENST00000534442 DCAF12L2Q5VW00 463 aa4.3□□□□□ -1.72
ECHDC1-223ENST00000534442 SIGIRRQ6IA17 410 aa4.3□□□□□ -1.72
ECHDC1-223ENST00000534442 ZSCAN25Q6NSZ9 544 aa4.3□□□□□ -1.72
ECHDC1-223ENST00000534442 XKRXQ6PP77 449 aa4.3□□□□□ -1.72
ECHDC1-223ENST00000534442 Q6ZSV7 163 aa4.3□□□□□ -1.72
ECHDC1-223ENST00000534442 HIST3H2AQ7L7L0 130 aa4.3□□□□□ -1.72
ECHDC1-223ENST00000534442 ZNF367Q7RTV3 350 aa4.3□□□□□ -1.72
ECHDC1-223ENST00000534442 RBMXL3Q8N7X1 1067 aaKnown RBP4.3□□□□□ -1.72
ECHDC1-223ENST00000534442 POMGNT2Q8NAT1 580 aa4.3□□□□□ -1.72
ECHDC1-223ENST00000534442 CNNM3Q8NE01 707 aa4.3□□□□□ -1.72
ECHDC1-223ENST00000534442 APPL2Q8NEU8 664 aa4.3□□□□□ -1.72
ECHDC1-223ENST00000534442 PRSS3P2Q8NHM4 247 aa4.3□□□□□ -1.72
ECHDC1-223ENST00000534442 C16orf52Q8NHV5 167 aa4.3□□□□□ -1.72
ECHDC1-223ENST00000534442 DUSP19Q8WTR2 217 aa4.3□□□□□ -1.72
ECHDC1-223ENST00000534442 RMND5BQ96G75 393 aaPredicted RBP4.3□□□□□ -1.72
ECHDC1-223ENST00000534442 ZNF559Q9BR84 538 aa4.3□□□□□ -1.72
ECHDC1-223ENST00000534442 PCGF1Q9BSM1 259 aa4.3□□□□□ -1.72
ECHDC1-223ENST00000534442 ISCUQ9H1K1 167 aa4.3□□□□□ -1.72
ECHDC1-223ENST00000534442 PIGMQ9H3S5 423 aa4.3□□□□□ -1.72
ECHDC1-223ENST00000534442 OSGEPL1Q9H4B0 414 aa4.3□□□□□ -1.72
ECHDC1-223ENST00000534442 WDR26Q9H7D7 661 aa4.3□□□□□ -1.72
ECHDC1-223ENST00000534442 MMP25Q9NPA2 562 aa4.3□□□□□ -1.72
ECHDC1-223ENST00000534442 FZD3Q9NPG1 666 aa4.3□□□□□ -1.72
ECHDC1-223ENST00000534442 SLC35C2Q9NQQ7 365 aa4.3□□□□□ -1.72
ECHDC1-223ENST00000534442 TMEM51Q9NW97 253 aa4.3□□□□□ -1.72
ECHDC1-223ENST00000534442 TUBA8Q9NY65 449 aaPredicted RBP4.3□□□□□ -1.72
ECHDC1-223ENST00000534442 SLC9A2Q9UBY0 812 aa4.3□□□□□ -1.72
ECHDC1-223ENST00000534442 FER1L5A0AVI2 2057 aa4.3□□□□□ -1.72
ECHDC1-223ENST00000534442 A8MXE2 369 aa4.29□□□□□ -1.72
ECHDC1-223ENST00000534442 TMX2-CTNND1H3BSU7 103 aa4.29□□□□□ -1.72
ECHDC1-223ENST00000534442 PLRG1O43660 514 aaKnown RBP4.29□□□□□ -1.72
ECHDC1-223ENST00000534442 AVILO75366 819 aa4.29□□□□□ -1.72
ECHDC1-223ENST00000534442 GPC4O75487 556 aa4.29□□□□□ -1.72
ECHDC1-223ENST00000534442 ZWINTO95229 277 aa4.29□□□□□ -1.72
ECHDC1-223ENST00000534442 VNN2O95498 520 aa4.29□□□□□ -1.72
ECHDC1-223ENST00000534442 TNFRSF1BP20333 461 aa4.29□□□□□ -1.72
ECHDC1-223ENST00000534442 HOXA11P31270 313 aaPredicted RBP4.29□□□□□ -1.72
ECHDC1-223ENST00000534442 PRCPP42785 496 aa4.29□□□□□ -1.72
ECHDC1-223ENST00000534442 LMAN1P49257 510 aa4.29□□□□□ -1.72
ECHDC1-223ENST00000534442 VAMP7P51809 220 aa4.29□□□□□ -1.72
ECHDC1-223ENST00000534442 GPR143P51810 404 aa4.29□□□□□ -1.72
ECHDC1-223ENST00000534442 SSBP2P81877 361 aaPredicted RBP4.29□□□□□ -1.72
ECHDC1-223ENST00000534442 SRSF4Q08170 494 aaKnown RBP4.29□□□□□ -1.72
ECHDC1-223ENST00000534442 CTTNQ14247 550 aaKnown RBP4.29□□□□□ -1.72
ECHDC1-223ENST00000534442 PSMD6Q15008 389 aa4.29□□□□□ -1.72
ECHDC1-223ENST00000534442 C15orf59Q2T9L4 293 aaPredicted RBP4.29□□□□□ -1.72
ECHDC1-223ENST00000534442 CHRFAM7AQ494W8 412 aa4.29□□□□□ -1.72
ECHDC1-223ENST00000534442 C1QTNF12Q5T7M4 302 aa4.29□□□□□ -1.72
ECHDC1-223ENST00000534442 METTL2BQ6P1Q9 378 aaKnown RBP4.29□□□□□ -1.72
ECHDC1-223ENST00000534442 B3GNT6Q6ZMB0 384 aa4.29□□□□□ -1.72
ECHDC1-223ENST00000534442 MON1BQ7L1V2 547 aa4.29□□□□□ -1.72
ECHDC1-223ENST00000534442 SDCCAG8Q86SQ7 713 aaPredicted RBP4.29□□□□□ -1.72
ECHDC1-223ENST00000534442 TMEM135Q86UB9 458 aa4.29□□□□□ -1.72
ECHDC1-223ENST00000534442 ZBTB8BQ8NAP8 495 aaPredicted RBP4.29□□□□□ -1.72
ECHDC1-223ENST00000534442 ZNF548Q8NEK5 533 aaPredicted RBP4.29□□□□□ -1.72
ECHDC1-223ENST00000534442 Q8NFD4 153 aa4.29□□□□□ -1.72
ECHDC1-223ENST00000534442 MPLKIPQ8TAP9 179 aa4.29□□□□□ -1.72
ECHDC1-223ENST00000534442 NTN5Q8WTR8 489 aaPredicted RBP4.29□□□□□ -1.72
ECHDC1-223ENST00000534442 PTPMT1Q8WUK0 201 aaPredicted RBP4.29□□□□□ -1.72
ECHDC1-223ENST00000534442 URB1-AS1Q96HZ7 61 aa4.29□□□□□ -1.72
ECHDC1-223ENST00000534442 METTL2AQ96IZ6 378 aaKnown RBP4.29□□□□□ -1.72
ECHDC1-223ENST00000534442 CEP295NLQ96MC4 621 aa4.29□□□□□ -1.72
ECHDC1-223ENST00000534442 PGLYRP2Q96PD5 576 aa4.29□□□□□ -1.72
ECHDC1-223ENST00000534442 DGAT2Q96PD7 388 aa4.29□□□□□ -1.72
ECHDC1-223ENST00000534442 HAUS8Q9BT25 410 aa4.29□□□□□ -1.72
ECHDC1-223ENST00000534442 MRPL1Q9BYD6 325 aaKnown RBP4.29□□□□□ -1.72
ECHDC1-223ENST00000534442 NACAP1Q9BZK3 213 aa4.29□□□□□ -1.72
ECHDC1-223ENST00000534442 NXF3Q9H4D5 531 aaKnown RBP4.29□□□□□ -1.72
ECHDC1-223ENST00000534442 RABEP2Q9H5N1 569 aa4.29□□□□□ -1.72
ECHDC1-223ENST00000534442 PPP1R3EQ9H7J1 279 aa4.29□□□□□ -1.72
ECHDC1-223ENST00000534442 EBF2Q9HAK2 575 aa4.29□□□□□ -1.72
ECHDC1-223ENST00000534442 FGF21Q9NSA1 209 aa4.29□□□□□ -1.72
ECHDC1-223ENST00000534442 ACSS1Q9NUB1 689 aaPredicted RBP4.29□□□□□ -1.72
ECHDC1-223ENST00000534442 NLGN3Q9NZ94 848 aa4.29□□□□□ -1.72
ECHDC1-223ENST00000534442 OR6C3Q9NZP0 311 aa4.29□□□□□ -1.72
ECHDC1-223ENST00000534442 WDR35Q9P2L0 1181 aa4.29□□□□□ -1.72
ECHDC1-223ENST00000534442 RCOR1Q9UKL0 485 aa4.29□□□□□ -1.72
ECHDC1-223ENST00000534442 ASB3Q9Y575 518 aa4.29□□□□□ -1.72
ECHDC1-223ENST00000534442 MRPS18BQ9Y676 258 aaKnown RBP4.29□□□□□ -1.72
ECHDC1-223ENST00000534442 DNAH1Q9P2D7 4330 aa4.29□□□□□ -1.72
ECHDC1-223ENST00000534442 LOC100509620A0A075B734 347 aa4.28□□□□□ -1.72
ECHDC1-223ENST00000534442 D6RAR5 112 aa4.28□□□□□ -1.72
ECHDC1-223ENST00000534442 NTN3O00634 580 aaPredicted RBP4.28□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms