RNA–Protein interactions for RNA: ENST00000533728.1

CHKA-207, Transcript of choline kinase alpha, humanhuman

TSL 2

Gene CHKA, Length 662 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKA-207ENST00000533728 FCHO2Q0JRZ9 810 aa9.31□□□□□ -0.92
CHKA-207ENST00000533728 ENPP2Q13822 863 aa9.31□□□□□ -0.92
CHKA-207ENST00000533728 DAG1Q14118 895 aa9.31□□□□□ -0.92
CHKA-207ENST00000533728 VEZF1Q14119 521 aa9.31□□□□□ -0.92
CHKA-207ENST00000533728 UBXN2BQ14CS0 331 aa9.31□□□□□ -0.92
CHKA-207ENST00000533728 RFX4Q33E94 735 aa9.31□□□□□ -0.92
CHKA-207ENST00000533728 CNPY1Q3B7I2 92 aa9.31□□□□□ -0.92
CHKA-207ENST00000533728 CPZQ66K79 652 aa9.31□□□□□ -0.92
CHKA-207ENST00000533728 MED27Q6P2C8 311 aa9.31□□□□□ -0.92
CHKA-207ENST00000533728 LCTLQ6UWM7 567 aa9.31□□□□□ -0.92
CHKA-207ENST00000533728 SLCO4C1Q6ZQN7 724 aa9.31□□□□□ -0.92
CHKA-207ENST00000533728 SYT12Q8IV01 421 aa9.31□□□□□ -0.92
CHKA-207ENST00000533728 SLC44A3Q8N4M1 653 aa9.31□□□□□ -0.92
CHKA-207ENST00000533728 OXR1Q8N573 874 aa9.31□□□□□ -0.92
CHKA-207ENST00000533728 VPS37AQ8NEZ2 397 aa9.31□□□□□ -0.92
CHKA-207ENST00000533728 TSPAN14Q8NG11 270 aa9.31□□□□□ -0.92
CHKA-207ENST00000533728 OR10A6Q8NH74 314 aa9.31□□□□□ -0.92
CHKA-207ENST00000533728 FGF13Q92913 245 aa9.31□□□□□ -0.92
CHKA-207ENST00000533728 FAM162AQ96A26 154 aa9.31□□□□□ -0.92
CHKA-207ENST00000533728 PYCR2Q96C36 320 aa9.31□□□□□ -0.92
CHKA-207ENST00000533728 COQ8BQ96D53 544 aa9.31□□□□□ -0.92
CHKA-207ENST00000533728 MTERF3Q96E29 417 aa9.31□□□□□ -0.92
CHKA-207ENST00000533728 AURKBQ96GD4 344 aaPredicted RBP9.31□□□□□ -0.92
CHKA-207ENST00000533728 APOLD1Q96LR9 279 aa9.31□□□□□ -0.92
CHKA-207ENST00000533728 RNF145Q96MT1 663 aa9.31□□□□□ -0.92
CHKA-207ENST00000533728 OR4K3Q96R72 315 aa9.31□□□□□ -0.92
CHKA-207ENST00000533728 MYADMQ96S97 322 aa9.31□□□□□ -0.92
CHKA-207ENST00000533728 PKP4Q99569 1192 aa9.31□□□□□ -0.92
CHKA-207ENST00000533728 ATG10Q9H0Y0 220 aa9.31□□□□□ -0.92
CHKA-207ENST00000533728 RBM38Q9H0Z9 239 aaKnown RBP9.31□□□□□ -0.92
CHKA-207ENST00000533728 NTN4Q9HB63 628 aa9.31□□□□□ -0.92
CHKA-207ENST00000533728 PTTG2Q9NZH5 202 aa9.31□□□□□ -0.92
CHKA-207ENST00000533728 SAMD4AQ9UPU9 718 aaKnown RBP9.31□□□□□ -0.92
CHKA-207ENST00000533728 DYRK1BQ9Y463 629 aa9.31□□□□□ -0.92
CHKA-207ENST00000533728 PCDHB14Q9Y5E9 798 aa9.31□□□□□ -0.92
CHKA-207ENST00000533728 TMEM202A6NGA9 273 aa9.3□□□□□ -0.92
CHKA-207ENST00000533728 RFXANKO14593 260 aa9.3□□□□□ -0.92
CHKA-207ENST00000533728 EI24O14681 340 aa9.3□□□□□ -0.92
CHKA-207ENST00000533728 SCAMP2O15127 329 aaKnown RBP9.3□□□□□ -0.92
CHKA-207ENST00000533728 LZTS3O60299 673 aaPredicted RBP9.3□□□□□ -0.92
CHKA-207ENST00000533728 KCNJ13O60928 360 aa9.3□□□□□ -0.92
CHKA-207ENST00000533728 SCN2BO60939 215 aa9.3□□□□□ -0.92
CHKA-207ENST00000533728 EPN2O95208 641 aa9.3□□□□□ -0.92
CHKA-207ENST00000533728 SLC16A8O95907 504 aa9.3□□□□□ -0.92
CHKA-207ENST00000533728 RPN2P04844 631 aa9.3□□□□□ -0.92
CHKA-207ENST00000533728 C1GALT1C1LP0DN25 315 aa9.3□□□□□ -0.92
CHKA-207ENST00000533728 ERGP11308 486 aa9.3□□□□□ -0.92
CHKA-207ENST00000533728 KELP23276 732 aa9.3□□□□□ -0.92
CHKA-207ENST00000533728 GSTT1P30711 240 aa9.3□□□□□ -0.92
CHKA-207ENST00000533728 TIA1P31483 386 aaKnown RBP eCLIP9.3□□□□□ -0.92
CHKA-207ENST00000533728 HPCAL1P37235 193 aa9.3□□□□□ -0.92
CHKA-207ENST00000533728 MAGEA2P43356 314 aa9.3□□□□□ -0.92
CHKA-207ENST00000533728 GSTM5P46439 218 aa9.3□□□□□ -0.92
CHKA-207ENST00000533728 ARSFP54793 590 aa9.3□□□□□ -0.92
CHKA-207ENST00000533728 WNT3P56703 355 aa9.3□□□□□ -0.92
CHKA-207ENST00000533728 ROR2Q01974 943 aaKnown RBP9.3□□□□□ -0.92
CHKA-207ENST00000533728 CFHR1Q03591 330 aa9.3□□□□□ -0.92
CHKA-207ENST00000533728 IL18R1Q13478 541 aa9.3□□□□□ -0.92
CHKA-207ENST00000533728 ELOAQ14241 798 aaKnown RBP9.3□□□□□ -0.92
CHKA-207ENST00000533728 ZNF234Q14588 700 aa9.3□□□□□ -0.92
CHKA-207ENST00000533728 PON2Q15165 354 aa9.3□□□□□ -0.92
CHKA-207ENST00000533728 HIST2H2ACQ16777 129 aaPredicted RBP9.3□□□□□ -0.92
CHKA-207ENST00000533728 UGT8Q16880 541 aa9.3□□□□□ -0.92
CHKA-207ENST00000533728 CYBRD1Q53TN4 286 aa9.3□□□□□ -0.92
CHKA-207ENST00000533728 ZC3H12BQ5HYM0 836 aaKnown RBP9.3□□□□□ -0.92
CHKA-207ENST00000533728 TTC23Q5W5X9 447 aa9.3□□□□□ -0.92
CHKA-207ENST00000533728 HIST2H2AA3Q6FI13 130 aa9.3□□□□□ -0.92
CHKA-207ENST00000533728 RAET1GQ6H3X3 334 aa9.3□□□□□ -0.92
CHKA-207ENST00000533728 SLC30A9Q6PML9 568 aa9.3□□□□□ -0.92
CHKA-207ENST00000533728 ABRAXAS1Q6UWZ7 409 aa9.3□□□□□ -0.92
CHKA-207ENST00000533728 R3HCC1LQ7Z5L2 792 aaKnown RBP9.3□□□□□ -0.92
CHKA-207ENST00000533728 LRRC56Q8IYG6 542 aaPredicted RBP9.3□□□□□ -0.92
CHKA-207ENST00000533728 ZCCHC7Q8N3Z6 543 aaKnown RBP9.3□□□□□ -0.92
CHKA-207ENST00000533728 NATD1Q8N6N6 113 aa9.3□□□□□ -0.92
CHKA-207ENST00000533728 OR7G3Q8NG95 312 aa9.3□□□□□ -0.92
CHKA-207ENST00000533728 OR5K1Q8NHB7 308 aa9.3□□□□□ -0.92
CHKA-207ENST00000533728 GOT1L1Q8NHS2 421 aaPredicted RBP9.3□□□□□ -0.92
CHKA-207ENST00000533728 CXorf40AQ8TE69 158 aa9.3□□□□□ -0.92
CHKA-207ENST00000533728 ZNF480Q8WV37 535 aa9.3□□□□□ -0.92
CHKA-207ENST00000533728 SDCCAG3Q96C92 435 aa9.3□□□□□ -0.92
CHKA-207ENST00000533728 MTFMTQ96DP5 389 aaKnown RBP9.3□□□□□ -0.92
CHKA-207ENST00000533728 SLC47A1Q96FL8 570 aa9.3□□□□□ -0.92
CHKA-207ENST00000533728 HIC2Q96JB3 615 aa9.3□□□□□ -0.92
CHKA-207ENST00000533728 TSSK3Q96PN8 268 aa9.3□□□□□ -0.92
CHKA-207ENST00000533728 BHLHE41Q9C0J9 482 aaPredicted RBP9.3□□□□□ -0.92
CHKA-207ENST00000533728 REXO4Q9GZR2 422 aaKnown RBP9.3□□□□□ -0.92
CHKA-207ENST00000533728 PCBD2Q9H0N5 130 aa9.3□□□□□ -0.92
CHKA-207ENST00000533728 NT5DC2Q9H857 520 aa9.3□□□□□ -0.92
CHKA-207ENST00000533728 SGK2Q9HBY8 427 aa9.3□□□□□ -0.92
CHKA-207ENST00000533728 HPS4Q9NQG7 708 aa9.3□□□□□ -0.92
CHKA-207ENST00000533728 IFT80Q9P2H3 777 aaPredicted RBP9.3□□□□□ -0.92
CHKA-207ENST00000533728 GULP1Q9UBP9 304 aa9.3□□□□□ -0.92
CHKA-207ENST00000533728 ATP6V1HQ9UI12 483 aa9.3□□□□□ -0.92
CHKA-207ENST00000533728 RPS6KA6Q9UK32 745 aa9.3□□□□□ -0.92
CHKA-207ENST00000533728 FADS3Q9Y5Q0 445 aa9.3□□□□□ -0.92
CHKA-207ENST00000533728 CACNA1DQ01668 2161 aa9.3□□□□□ -0.92
CHKA-207ENST00000533728 DNHD1Q96M86 4753 aa9.29□□□□□ -0.92
CHKA-207ENST00000533728 ATG2BQ96BY7 2078 aa9.29□□□□□ -0.92
CHKA-207ENST00000533728 DOCK9Q9BZ29 2069 aa9.29□□□□□ -0.92
CHKA-207ENST00000533728 SPG11Q96JI7 2443 aa9.29□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms