RNA–Protein interactions for RNA: ENST00000533246.5

BDNF-218, Transcript of brain derived neurotrophic factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BDNF, Length 4,000 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-218ENST00000533246 STOML2Q9UJZ1 356 aa11.85□□□□□ -0.51
BDNF-218ENST00000533246 FBXL21Q9UKT6 434 aa11.85□□□□□ -0.51
BDNF-218ENST00000533246 CDC14AQ9UNH5 594 aa11.85□□□□□ -0.51
BDNF-218ENST00000533246 NME4O00746 187 aa11.85□□□□□ -0.51
BDNF-218ENST00000533246 PLOD3O60568 738 aa11.85□□□□□ -0.51
BDNF-218ENST00000533246 TP53P04637 393 aaPredicted RBP11.85□□□□□ -0.51
BDNF-218ENST00000533246 CD70P32970 193 aa11.85□□□□□ -0.51
BDNF-218ENST00000533246 AVPR1BP47901 424 aa11.85□□□□□ -0.51
BDNF-218ENST00000533246 TMEM115Q12893 351 aaPredicted RBP11.85□□□□□ -0.51
BDNF-218ENST00000533246 RAPSNQ13702 412 aa11.85□□□□□ -0.51
BDNF-218ENST00000533246 ZNHIT3Q15649 155 aaPredicted RBP11.85□□□□□ -0.51
BDNF-218ENST00000533246 LGI4Q8N135 537 aa11.85□□□□□ -0.51
BDNF-218ENST00000533246 POF1BQ8WVV4 589 aa11.85□□□□□ -0.51
BDNF-218ENST00000533246 JPH3Q8WXH2 748 aaPredicted RBP11.85□□□□□ -0.51
BDNF-218ENST00000533246 TTYH2Q9BSA4 534 aa11.85□□□□□ -0.51
BDNF-218ENST00000533246 POLR2J3Q9H1A7 115 aaKnown RBP11.85□□□□□ -0.51
BDNF-218ENST00000533246 LINC00597Q9H2U6 94 aa11.85□□□□□ -0.51
BDNF-218ENST00000533246 DLGAP4Q9Y2H0 992 aa11.85□□□□□ -0.51
BDNF-218ENST00000533246 TJP1Q07157 1748 aa11.84□□□□□ -0.51
BDNF-218ENST00000533246 LRRC72A6NJI9 287 aa11.84□□□□□ -0.51
BDNF-218ENST00000533246 H7BY64 318 aa11.84□□□□□ -0.51
BDNF-218ENST00000533246 PSIP1O75475 530 aaKnown RBP11.84□□□□□ -0.51
BDNF-218ENST00000533246 OR6A2O95222 327 aa11.84□□□□□ -0.51
BDNF-218ENST00000533246 CH25HO95992 272 aa11.84□□□□□ -0.51
BDNF-218ENST00000533246 CYBAP13498 195 aa11.84□□□□□ -0.51
BDNF-218ENST00000533246 POLR2CP19387 275 aaPredicted RBP11.84□□□□□ -0.51
BDNF-218ENST00000533246 PSMA1P25786 263 aaKnown RBP11.84□□□□□ -0.51
BDNF-218ENST00000533246 TRIM23P36406 574 aa11.84□□□□□ -0.51
BDNF-218ENST00000533246 SLC9A5Q14940 896 aa11.84□□□□□ -0.51
BDNF-218ENST00000533246 ZBED5Q49AG3 693 aa11.84□□□□□ -0.51
BDNF-218ENST00000533246 MORN1Q5T089 497 aa11.84□□□□□ -0.51
BDNF-218ENST00000533246 CXorf57Q6NSI4 855 aaKnown RBP11.84□□□□□ -0.51
BDNF-218ENST00000533246 BORAQ6PGQ7 559 aa11.84□□□□□ -0.51
BDNF-218ENST00000533246 C11orf88Q6PI97 169 aa11.84□□□□□ -0.51
BDNF-218ENST00000533246 ZZZ3Q8IYH5 903 aa11.84□□□□□ -0.51
BDNF-218ENST00000533246 ZNF296Q8WUU4 475 aaPredicted RBP11.84□□□□□ -0.51
BDNF-218ENST00000533246 HERVK_113Q902F9 699 aa11.84□□□□□ -0.51
BDNF-218ENST00000533246 TOP1MTQ969P6 601 aa11.84□□□□□ -0.51
BDNF-218ENST00000533246 PRAP1Q96NZ9 151 aa11.84□□□□□ -0.51
BDNF-218ENST00000533246 TRIT1Q9H3H1 467 aaKnown RBP11.84□□□□□ -0.51
BDNF-218ENST00000533246 CARS2Q9HA77 564 aaKnown RBP11.84□□□□□ -0.51
BDNF-218ENST00000533246 IGSF5Q9NSI5 407 aa11.84□□□□□ -0.51
BDNF-218ENST00000533246 COL18A1P39060 1754 aa11.84□□□□□ -0.51
BDNF-218ENST00000533246 CHURC1-FNTBB4DL54 471 aa11.84□□□□□ -0.51
BDNF-218ENST00000533246 RTCAO00442 366 aaKnown RBP11.84□□□□□ -0.51
BDNF-218ENST00000533246 ERI3O43414 337 aaKnown RBP11.84□□□□□ -0.51
BDNF-218ENST00000533246 FAM214AQ32MH5 1076 aa11.84□□□□□ -0.51
BDNF-218ENST00000533246 PAGE3Q5JUK9 113 aa11.84□□□□□ -0.51
BDNF-218ENST00000533246 ZNF544Q6NX49 715 aa11.84□□□□□ -0.51
BDNF-218ENST00000533246 SYCE2Q6PIF2 218 aa11.84□□□□□ -0.51
BDNF-218ENST00000533246 ARSKQ6UWY0 536 aa11.84□□□□□ -0.51
BDNF-218ENST00000533246 BEND5Q7L4P6 421 aa11.84□□□□□ -0.51
BDNF-218ENST00000533246 CHST14Q8NCH0 376 aa11.84□□□□□ -0.51
BDNF-218ENST00000533246 PEX13Q92968 403 aa11.84□□□□□ -0.51
BDNF-218ENST00000533246 CNPPD1Q9BV87 410 aa11.84□□□□□ -0.51
BDNF-218ENST00000533246 TBC1D17Q9HA65 648 aa11.84□□□□□ -0.51
BDNF-218ENST00000533246 NTN4Q9HB63 628 aa11.84□□□□□ -0.51
BDNF-218ENST00000533246 MSRAQ9UJ68 235 aa11.84□□□□□ -0.51
BDNF-218ENST00000533246 GJD2Q9UKL4 321 aa11.84□□□□□ -0.51
BDNF-218ENST00000533246 UGT2A1Q9Y4X1 527 aa11.84□□□□□ -0.51
BDNF-218ENST00000533246 PLK4O00444 970 aa11.84□□□□□ -0.51
BDNF-218ENST00000533246 STX16O14662 325 aa11.84□□□□□ -0.51
BDNF-218ENST00000533246 CCNB2O95067 398 aa11.84□□□□□ -0.51
BDNF-218ENST00000533246 PAHP00439 452 aa11.84□□□□□ -0.51
BDNF-218ENST00000533246 ARCN1P48444 511 aaKnown RBP11.84□□□□□ -0.51
BDNF-218ENST00000533246 AP1S2P56377 157 aa11.84□□□□□ -0.51
BDNF-218ENST00000533246 RPS3AP61247 264 aaKnown RBP11.84□□□□□ -0.51
BDNF-218ENST00000533246 ZXDBP98169 803 aa11.84□□□□□ -0.51
BDNF-218ENST00000533246 BNC1Q01954 994 aa11.84□□□□□ -0.51
BDNF-218ENST00000533246 SCARB2Q14108 478 aa11.84□□□□□ -0.51
BDNF-218ENST00000533246 PIGGQ5H8A4 983 aa11.84□□□□□ -0.51
BDNF-218ENST00000533246 NUS1Q96E22 293 aa11.84□□□□□ -0.51
BDNF-218ENST00000533246 TBX5Q99593 518 aa11.84□□□□□ -0.51
BDNF-218ENST00000533246 LMAN2LQ9H0V9 348 aa11.84□□□□□ -0.51
BDNF-218ENST00000533246 MRM3Q9HC36 420 aaKnown RBP11.84□□□□□ -0.51
BDNF-218ENST00000533246 TMEM30AQ9NV96 361 aa11.84□□□□□ -0.51
BDNF-218ENST00000533246 IL36AQ9UHA7 158 aa11.84□□□□□ -0.51
BDNF-218ENST00000533246 BOLA1Q9Y3E2 137 aa11.84□□□□□ -0.51
BDNF-218ENST00000533246 CAPN14A8MX76 684 aa11.83□□□□□ -0.51
BDNF-218ENST00000533246 M0QZQ0 153 aa11.83□□□□□ -0.51
BDNF-218ENST00000533246 C6orf47O95873 294 aa11.83□□□□□ -0.51
BDNF-218ENST00000533246 BCHEP06276 602 aa11.83□□□□□ -0.51
BDNF-218ENST00000533246 EBLN1P0CF75 366 aa11.83□□□□□ -0.51
BDNF-218ENST00000533246 TCF3P15923 654 aa11.83□□□□□ -0.51
BDNF-218ENST00000533246 GTF2E2P29084 291 aaKnown RBP11.83□□□□□ -0.51
BDNF-218ENST00000533246 SLC6A4P31645 630 aa11.83□□□□□ -0.51
BDNF-218ENST00000533246 HMGCLP35914 325 aa11.83□□□□□ -0.51
BDNF-218ENST00000533246 ERVK-21P61565 698 aa11.83□□□□□ -0.51
BDNF-218ENST00000533246 SLC13A2Q13183 592 aa11.83□□□□□ -0.51
BDNF-218ENST00000533246 LRRC32Q14392 662 aa11.83□□□□□ -0.51
BDNF-218ENST00000533246 PRAMEF14Q5SWL7 426 aa11.83□□□□□ -0.51
BDNF-218ENST00000533246 PRAMEF13Q5VWM6 474 aa11.83□□□□□ -0.51
BDNF-218ENST00000533246 NOXRED1Q6NXP6 359 aa11.83□□□□□ -0.51
BDNF-218ENST00000533246 LETMD1Q6P1Q0 360 aa11.83□□□□□ -0.51
BDNF-218ENST00000533246 BRAT1Q6PJG6 821 aa11.83□□□□□ -0.51
BDNF-218ENST00000533246 KDELC1Q6UW63 502 aa11.83□□□□□ -0.51
BDNF-218ENST00000533246 TMIGD1Q6UXZ0 262 aa11.83□□□□□ -0.51
BDNF-218ENST00000533246 RASSF6Q6ZTQ3 369 aa11.83□□□□□ -0.51
BDNF-218ENST00000533246 TAF8Q7Z7C8 310 aa11.83□□□□□ -0.51
BDNF-218ENST00000533246 IQCHQ86VS3 1027 aa11.83□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms