RNA–Protein interactions for RNA: ENST00000533244.5

CCS-208, Transcript of copper chaperone for superoxide dismutase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCS, Length 1,430 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCS-208ENST00000533244 KLC1Q07866 573 aa19.39■□□□□ 0.69
CCS-208ENST00000533244 TBCCQ15814 346 aa19.39■□□□□ 0.69
CCS-208ENST00000533244 VWA2Q5GFL6 755 aa19.39■□□□□ 0.69
CCS-208ENST00000533244 TMIGD1Q6UXZ0 262 aa19.39■□□□□ 0.69
CCS-208ENST00000533244 MED25Q71SY5 747 aa19.39■□□□□ 0.69
CCS-208ENST00000533244 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP19.39■□□□□ 0.692e-6■■□□□ 12.8
CCS-208ENST00000533244 TMEM102Q8N9M5 508 aaPredicted RBP19.39■□□□□ 0.69
CCS-208ENST00000533244 SNX31Q8N9S9 440 aa19.39■□□□□ 0.69
CCS-208ENST00000533244 ZCCHC10Q8TBK6 192 aa19.39■□□□□ 0.69
CCS-208ENST00000533244 MZB1Q8WU39 189 aa19.39■□□□□ 0.69
CCS-208ENST00000533244 MIEF2Q96C03 454 aa19.39■□□□□ 0.69
CCS-208ENST00000533244 PTCD3Q96EY7 689 aaKnown RBP19.39■□□□□ 0.69
CCS-208ENST00000533244 SEC16BQ96JE7 1060 aa19.39■□□□□ 0.69
CCS-208ENST00000533244 ING2Q9H160 280 aa19.39■□□□□ 0.69
CCS-208ENST00000533244 ANKHQ9HCJ1 492 aa19.39■□□□□ 0.69
CCS-208ENST00000533244 SEMA3GQ9NS98 782 aa19.39■□□□□ 0.69
CCS-208ENST00000533244 PSMC3IPQ9P2W1 217 aaPredicted RBP19.39■□□□□ 0.69
CCS-208ENST00000533244 HS3ST3B1Q9Y662 390 aa19.39■□□□□ 0.69
CCS-208ENST00000533244 EIF4E1BA6NMX2 242 aaKnown RBP19.38■□□□□ 0.69
CCS-208ENST00000533244 H2AFYO75367 372 aaKnown RBP19.38■□□□□ 0.69
CCS-208ENST00000533244 DNAJB5O75953 348 aa19.38■□□□□ 0.69
CCS-208ENST00000533244 WFS1O76024 890 aa19.38■□□□□ 0.69
CCS-208ENST00000533244 SERPINA6P08185 405 aa19.38■□□□□ 0.69
CCS-208ENST00000533244 RGS1Q08116 209 aa19.38■□□□□ 0.69
CCS-208ENST00000533244 CHAF1BQ13112 559 aa19.38■□□□□ 0.69
CCS-208ENST00000533244 DOC2AQ14183 400 aa19.38■□□□□ 0.69
CCS-208ENST00000533244 HERC3Q15034 1050 aa19.38■□□□□ 0.69
CCS-208ENST00000533244 RBBP5Q15291 538 aaKnown RBP19.38■□□□□ 0.69
CCS-208ENST00000533244 PCBP2Q15366 365 aaKnown RBP eCLIP19.38■□□□□ 0.69
CCS-208ENST00000533244 SYT16Q17RD7 645 aa19.38■□□□□ 0.69
CCS-208ENST00000533244 WDR93Q6P2C0 686 aa19.38■□□□□ 0.69
CCS-208ENST00000533244 SHISA6Q6ZSJ9 500 aa19.38■□□□□ 0.69
CCS-208ENST00000533244 ZC3H7AQ8IWR0 971 aaKnown RBP19.38■□□□□ 0.69
CCS-208ENST00000533244 KRT78Q8N1N4 520 aa19.38■□□□□ 0.69
CCS-208ENST00000533244 ZNF843Q8N446 348 aa19.38■□□□□ 0.69
CCS-208ENST00000533244 TTLQ8NG68 377 aa19.38■□□□□ 0.69
CCS-208ENST00000533244 CRB3Q9BUF7 120 aa19.38■□□□□ 0.69
CCS-208ENST00000533244 EFCAB11Q9BUY7 163 aa19.38■□□□□ 0.69
CCS-208ENST00000533244 SLC25A18Q9H1K4 315 aa19.38■□□□□ 0.69
CCS-208ENST00000533244 P4HTMQ9NXG6 502 aa19.38■□□□□ 0.69
CCS-208ENST00000533244 XPR1Q9UBH6 696 aa19.38■□□□□ 0.69
CCS-208ENST00000533244 OPTCQ9UBM4 332 aa19.38■□□□□ 0.69
CCS-208ENST00000533244 IQANK1A0A1B0GTG1 560 aa19.37■□□□□ 0.69
CCS-208ENST00000533244 SOCS6O14544 535 aa19.37■□□□□ 0.69
CCS-208ENST00000533244 FFAR3O14843 346 aa19.37■□□□□ 0.69
CCS-208ENST00000533244 GPR42O15529 346 aa19.37■□□□□ 0.69
CCS-208ENST00000533244 CEACAM4O75871 244 aa19.37■□□□□ 0.69
CCS-208ENST00000533244 KLHL18O94889 574 aa19.37■□□□□ 0.69
CCS-208ENST00000533244 IGHEP01854 428 aa19.37■□□□□ 0.69
CCS-208ENST00000533244 SHBGP04278 402 aa19.37■□□□□ 0.69
CCS-208ENST00000533244 SMIM10L1P0DMW3 83 aa19.37■□□□□ 0.69
CCS-208ENST00000533244 GFAPP14136 432 aa19.37■□□□□ 0.69
CCS-208ENST00000533244 RRADP55042 308 aa19.37■□□□□ 0.69
CCS-208ENST00000533244 MAT1AQ00266 395 aaKnown RBP19.37■□□□□ 0.69
CCS-208ENST00000533244 PFKFB4Q16877 469 aa19.37■□□□□ 0.69
CCS-208ENST00000533244 XKR6Q5GH73 641 aa19.37■□□□□ 0.69
CCS-208ENST00000533244 METTL2BQ6P1Q9 378 aaKnown RBP19.37■□□□□ 0.69
CCS-208ENST00000533244 TMEM151AQ8N4L1 468 aa19.37■□□□□ 0.69
CCS-208ENST00000533244 UBLCP1Q8WVY7 318 aaPredicted RBP19.37■□□□□ 0.69
CCS-208ENST00000533244 ABHD17AQ96GS6 310 aa19.37■□□□□ 0.69
CCS-208ENST00000533244 SMIM10Q96HG1 83 aa19.37■□□□□ 0.69
CCS-208ENST00000533244 CCDC77Q9BR77 488 aa19.37■□□□□ 0.69
CCS-208ENST00000533244 AICDAQ9GZX7 198 aa19.37■□□□□ 0.69
CCS-208ENST00000533244 ZNF490Q9ULM2 529 aaPredicted RBP19.37■□□□□ 0.69
CCS-208ENST00000533244 NAALAD2Q9Y3Q0 740 aa19.37■□□□□ 0.69
CCS-208ENST00000533244 MKRN2OSH3BPM6 223 aa19.36■□□□□ 0.69
CCS-208ENST00000533244 SGK494L7N484 410 aa19.36■□□□□ 0.69
CCS-208ENST00000533244 AGPSO00116 658 aa19.36■□□□□ 0.69
CCS-208ENST00000533244 GALR3O60755 368 aaPredicted RBP19.36■□□□□ 0.69
CCS-208ENST00000533244 TBX6O95947 436 aaPredicted RBP19.36■□□□□ 0.69
CCS-208ENST00000533244 ALOX12P18054 663 aa19.36■□□□□ 0.69
CCS-208ENST00000533244 IRF8Q02556 426 aa19.36■□□□□ 0.69
CCS-208ENST00000533244 CHIT1Q13231 466 aa19.36■□□□□ 0.69
CCS-208ENST00000533244 VN1R5Q7Z5H4 357 aa19.36■□□□□ 0.69
CCS-208ENST00000533244 LAPTM4BQ86VI4 370 aa19.36■□□□□ 0.69
CCS-208ENST00000533244 LCA5Q86VQ0 697 aa19.36■□□□□ 0.69
CCS-208ENST00000533244 TDRPQ86YL5 185 aa19.36■□□□□ 0.69
CCS-208ENST00000533244 C9orf43Q8TAL5 461 aaPredicted RBP19.36■□□□□ 0.69
CCS-208ENST00000533244 UTP15Q8TED0 518 aaKnown RBP19.36■□□□□ 0.69
CCS-208ENST00000533244 MRPL57Q9BQC6 102 aaKnown RBP19.36■□□□□ 0.69
CCS-208ENST00000533244 RHBGQ9H310 441 aa19.36■□□□□ 0.69
CCS-208ENST00000533244 PPCSQ9HAB8 311 aa19.36■□□□□ 0.69
CCS-208ENST00000533244 MLXIPLQ9NP71 852 aa19.36■□□□□ 0.69
CCS-208ENST00000533244 ACSS2Q9NR19 701 aa19.36■□□□□ 0.69
CCS-208ENST00000533244 CPSF2Q9P2I0 782 aaKnown RBP19.36■□□□□ 0.69
CCS-208ENST00000533244 C3orf18Q9UK00 162 aa19.36■□□□□ 0.69
CCS-208ENST00000533244 TMCO1Q9UM00 188 aa19.36■□□□□ 0.69
CCS-208ENST00000533244 PCDHGA9Q9Y5G4 932 aaKnown RBP19.36■□□□□ 0.69
CCS-208ENST00000533244 SCN3AQ9NY46 2000 aa19.36■□□□□ 0.69
CCS-208ENST00000533244 A0A1W2PQ72 361 aa19.35■□□□□ 0.69
CCS-208ENST00000533244 LRRC14BA6NHZ5 514 aa19.35■□□□□ 0.69
CCS-208ENST00000533244 C4orf51C9J302 202 aa19.35■□□□□ 0.69
CCS-208ENST00000533244 PEX12O00623 359 aa19.35■□□□□ 0.69
CCS-208ENST00000533244 RDH16O75452 317 aa19.35■□□□□ 0.69
CCS-208ENST00000533244 CLEC3AO75596 197 aa19.35■□□□□ 0.69
CCS-208ENST00000533244 BMP10O95393 424 aa19.35■□□□□ 0.69
CCS-208ENST00000533244 SERPIND1P05546 499 aa19.35■□□□□ 0.69
CCS-208ENST00000533244 SBK3P0C264 359 aa19.35■□□□□ 0.69
CCS-208ENST00000533244 ZNF888P0CJ79 500 aaPredicted RBP19.35■□□□□ 0.69
CCS-208ENST00000533244 EPB42P16452 691 aa19.35■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms