RNA–Protein interactions for RNA: ENST00000532602.1

PCDHA9-202, Transcript of protocadherin alpha 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCDHA9, Length 6,293 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA9-202ENST00000532602 CGREF1Q99674 301 aa14.32□□□□□ -0.12
PCDHA9-202ENST00000532602 PCDHAC1Q9H158 963 aa14.32□□□□□ -0.12
PCDHA9-202ENST00000532602 TRPM3Q9HCF6 1732 aaPredicted RBP14.32□□□□□ -0.12
PCDHA9-202ENST00000532602 PGRP06401 933 aa14.31□□□□□ -0.12
PCDHA9-202ENST00000532602 HEXBP07686 556 aa14.31□□□□□ -0.12
PCDHA9-202ENST00000532602 GSTT2BP0CG30 244 aa14.31□□□□□ -0.12
PCDHA9-202ENST00000532602 OR3A3P47888 321 aa14.31□□□□□ -0.12
PCDHA9-202ENST00000532602 OR3A2P47893 321 aa14.31□□□□□ -0.12
PCDHA9-202ENST00000532602 ST3GAL3Q11203 375 aa14.31□□□□□ -0.12
PCDHA9-202ENST00000532602 IRF5Q13568 498 aa14.31□□□□□ -0.12
PCDHA9-202ENST00000532602 E2F2Q14209 437 aa14.31□□□□□ -0.12
PCDHA9-202ENST00000532602 ALG1LQ6GMV1 187 aa14.31□□□□□ -0.12
PCDHA9-202ENST00000532602 TMEM214Q6NUQ4 689 aaKnown RBP14.31□□□□□ -0.12
PCDHA9-202ENST00000532602 TP53INP2Q8IXH6 220 aa14.31□□□□□ -0.12
PCDHA9-202ENST00000532602 OR6N1Q8NGY5 312 aa14.31□□□□□ -0.12
PCDHA9-202ENST00000532602 SETD6Q8TBK2 473 aa14.31□□□□□ -0.12
PCDHA9-202ENST00000532602 COPS4Q9BT78 406 aa14.31□□□□□ -0.12
PCDHA9-202ENST00000532602 POPDC3Q9HBV1 291 aa14.31□□□□□ -0.12
PCDHA9-202ENST00000532602 CENPMQ9NSP4 180 aa14.31□□□□□ -0.12
PCDHA9-202ENST00000532602 PRODH2Q9UF12 536 aa14.31□□□□□ -0.12
PCDHA9-202ENST00000532602 TMEM59LQ9UK28 342 aa14.31□□□□□ -0.12
PCDHA9-202ENST00000532602 CHP2O43745 196 aa14.31□□□□□ -0.12
PCDHA9-202ENST00000532602 AHCYL1O43865 530 aa14.31□□□□□ -0.12
PCDHA9-202ENST00000532602 CDKN1CP49918 316 aaPredicted RBP14.31□□□□□ -0.12
PCDHA9-202ENST00000532602 XKP51811 444 aa14.31□□□□□ -0.12
PCDHA9-202ENST00000532602 SELENOVP59797 346 aa14.31□□□□□ -0.12
PCDHA9-202ENST00000532602 DSC3Q14574 896 aa14.31□□□□□ -0.12
PCDHA9-202ENST00000532602 AKIRIN2Q53H80 203 aa14.31□□□□□ -0.12
PCDHA9-202ENST00000532602 LACTB2Q53H82 288 aaPredicted RBP14.31□□□□□ -0.12
PCDHA9-202ENST00000532602 TMEM25Q86YD3 366 aa14.31□□□□□ -0.12
PCDHA9-202ENST00000532602 CAPSLQ8WWF8 208 aa14.31□□□□□ -0.12
PCDHA9-202ENST00000532602 SGCDQ92629 289 aa14.31□□□□□ -0.12
PCDHA9-202ENST00000532602 SLC39A3Q9BRY0 314 aa14.31□□□□□ -0.12
PCDHA9-202ENST00000532602 VRTNQ9H8Y1 702 aa14.31□□□□□ -0.12
PCDHA9-202ENST00000532602 PCDHGB2Q9Y5G2 931 aa14.31□□□□□ -0.12
PCDHA9-202ENST00000532602 TAF1P21675 1872 aa14.31□□□□□ -0.12
PCDHA9-202ENST00000532602 H3BQ06 376 aaPredicted RBP14.31□□□□□ -0.12
PCDHA9-202ENST00000532602 DLX3O60479 287 aa14.31□□□□□ -0.12
PCDHA9-202ENST00000532602 KAT7O95251 611 aa14.31□□□□□ -0.12
PCDHA9-202ENST00000532602 ENDOUP21128 410 aaKnown RBP14.31□□□□□ -0.12
PCDHA9-202ENST00000532602 FECHP22830 423 aa14.31□□□□□ -0.12
PCDHA9-202ENST00000532602 CDK6Q00534 326 aa14.31□□□□□ -0.12
PCDHA9-202ENST00000532602 KCTD8Q6ZWB6 473 aa14.31□□□□□ -0.12
PCDHA9-202ENST00000532602 LRRTM3Q86VH5 581 aa14.31□□□□□ -0.12
PCDHA9-202ENST00000532602 KLHL36Q8N4N3 616 aa14.31□□□□□ -0.12
PCDHA9-202ENST00000532602 C9orf43Q8TAL5 461 aaPredicted RBP14.31□□□□□ -0.12
PCDHA9-202ENST00000532602 MR1Q95460 341 aa14.31□□□□□ -0.12
PCDHA9-202ENST00000532602 A0A075B6Q4 140 aa14.31□□□□□ -0.12
PCDHA9-202ENST00000532602 CRTC2Q53ET0 693 aaPredicted RBP14.31□□□□□ -0.12
PCDHA9-202ENST00000532602 ZDHHC14Q8IZN3 488 aa14.31□□□□□ -0.12
PCDHA9-202ENST00000532602 PEX13Q92968 403 aa14.31□□□□□ -0.12
PCDHA9-202ENST00000532602 OR52B2Q96RD2 323 aa14.31□□□□□ -0.12
PCDHA9-202ENST00000532602 FBRSQ9HAH7 460 aa14.31□□□□□ -0.12
PCDHA9-202ENST00000532602 DKKL1Q9UK85 242 aa14.31□□□□□ -0.12
PCDHA9-202ENST00000532602 HYKKA2RU49 373 aa14.31□□□□□ -0.12
PCDHA9-202ENST00000532602 MUSKO15146 869 aa14.31□□□□□ -0.12
PCDHA9-202ENST00000532602 CD70P32970 193 aa14.31□□□□□ -0.12
PCDHA9-202ENST00000532602 LPAL2Q16609 132 aa14.31□□□□□ -0.12
PCDHA9-202ENST00000532602 PRPF38BQ5VTL8 546 aaKnown RBP14.31□□□□□ -0.12
PCDHA9-202ENST00000532602 FIP1L1Q6UN15 594 aaKnown RBP14.31□□□□□ -0.12
PCDHA9-202ENST00000532602 ZSCAN4Q8NAM6 433 aaPredicted RBP14.31□□□□□ -0.12
PCDHA9-202ENST00000532602 OR2L3Q8NG85 312 aa14.31□□□□□ -0.12
PCDHA9-202ENST00000532602 MOAP1Q96BY2 351 aa14.31□□□□□ -0.12
PCDHA9-202ENST00000532602 MAGEE1Q9HCI5 957 aa14.31□□□□□ -0.12
PCDHA9-202ENST00000532602 GIMAP2Q9UG22 337 aa14.31□□□□□ -0.12
PCDHA9-202ENST00000532602 ITGA3P26006 1051 aa14.3□□□□□ -0.12
PCDHA9-202ENST00000532602 ZMYND11Q15326 602 aa14.3□□□□□ -0.12
PCDHA9-202ENST00000532602 GPR153Q6NV75 609 aa14.3□□□□□ -0.12
PCDHA9-202ENST00000532602 SLC2A7Q6PXP3 512 aa14.3□□□□□ -0.12
PCDHA9-202ENST00000532602 ZC3H3Q8IXZ2 948 aaKnown RBP14.3□□□□□ -0.12
PCDHA9-202ENST00000532602 OR52E4Q8NGH9 312 aa14.3□□□□□ -0.12
PCDHA9-202ENST00000532602 R3HDMLQ9H3Y0 253 aa14.3□□□□□ -0.12
PCDHA9-202ENST00000532602 NSUN3Q9H649 340 aaKnown RBP14.3□□□□□ -0.12
PCDHA9-202ENST00000532602 KAT8Q9H7Z6 458 aaKnown RBP14.3□□□□□ -0.12
PCDHA9-202ENST00000532602 PDE7BQ9NP56 450 aa14.3□□□□□ -0.12
PCDHA9-202ENST00000532602 ITGB1BP2Q9UKP3 347 aa14.3□□□□□ -0.12
PCDHA9-202ENST00000532602 PSAT1Q9Y617 370 aa14.3□□□□□ -0.12
PCDHA9-202ENST00000532602 TFECO14948 347 aaPredicted RBP14.3□□□□□ -0.12
PCDHA9-202ENST00000532602 CBFA2T3O75081 653 aa14.3□□□□□ -0.12
PCDHA9-202ENST00000532602 FOSL2P15408 326 aa14.3□□□□□ -0.12
PCDHA9-202ENST00000532602 NR4A1P22736 598 aa14.3□□□□□ -0.12
PCDHA9-202ENST00000532602 ELOAQ14241 798 aaKnown RBP14.3□□□□□ -0.12
PCDHA9-202ENST00000532602 CEP97Q8IW35 865 aa14.3□□□□□ -0.12
PCDHA9-202ENST00000532602 LGI4Q8N135 537 aa14.3□□□□□ -0.12
PCDHA9-202ENST00000532602 PHOSPHO1Q8TCT1 267 aa14.3□□□□□ -0.12
PCDHA9-202ENST00000532602 TSGA13Q96PP4 275 aa14.3□□□□□ -0.12
PCDHA9-202ENST00000532602 TBX5Q99593 518 aa14.3□□□□□ -0.12
PCDHA9-202ENST00000532602 SLCO3A1Q9UIG8 710 aa14.3□□□□□ -0.12
PCDHA9-202ENST00000532602 BCHEP06276 602 aa14.3□□□□□ -0.12
PCDHA9-202ENST00000532602 DNAJA1P31689 397 aaKnown RBP14.3□□□□□ -0.12
PCDHA9-202ENST00000532602 UFM1P61960 85 aa14.3□□□□□ -0.12
PCDHA9-202ENST00000532602 PITPNAQ00169 270 aa14.3□□□□□ -0.12
PCDHA9-202ENST00000532602 LNX2Q8N448 690 aa14.3□□□□□ -0.12
PCDHA9-202ENST00000532602 OR10Q1Q8NGQ4 319 aa14.3□□□□□ -0.12
PCDHA9-202ENST00000532602 FOXJ1Q92949 421 aa14.3□□□□□ -0.12
PCDHA9-202ENST00000532602 MRGPRX2Q96LB1 330 aa14.3□□□□□ -0.12
PCDHA9-202ENST00000532602 A0A0U1RQS6 177 aa14.3□□□□□ -0.12
PCDHA9-202ENST00000532602 TRBC2A0A5B9 178 aa14.3□□□□□ -0.12
PCDHA9-202ENST00000532602 ZNF860A6NHJ4 632 aa14.3□□□□□ -0.12
PCDHA9-202ENST00000532602 LATO43561 262 aa14.3□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms