RNA–Protein interactions for RNA: ENST00000532331.5

PTPRK-221, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRK, Length 5,757 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-221ENST00000532331 GOLGA7Q7Z5G4 137 aa10.93□□□□□ -0.66
PTPRK-221ENST00000532331 ZDHHC14Q8IZN3 488 aa10.93□□□□□ -0.66
PTPRK-221ENST00000532331 FAM110BQ8TC76 370 aa10.93□□□□□ -0.66
PTPRK-221ENST00000532331 MRGPRX2Q96LB1 330 aa10.93□□□□□ -0.66
PTPRK-221ENST00000532331 EBF4Q9BQW3 602 aa10.93□□□□□ -0.66
PTPRK-221ENST00000532331 CHID1Q9BWS9 393 aa10.93□□□□□ -0.66
PTPRK-221ENST00000532331 OR51B5Q9H339 312 aa10.93□□□□□ -0.66
PTPRK-221ENST00000532331 PIGUQ9H490 435 aa10.93□□□□□ -0.66
PTPRK-221ENST00000532331 C11orf16Q9NQ32 467 aa10.93□□□□□ -0.66
PTPRK-221ENST00000532331 DHRS7Q9Y394 339 aa10.93□□□□□ -0.66
PTPRK-221ENST00000532331 FAM227AF5H4B4 570 aa10.92□□□□□ -0.66
PTPRK-221ENST00000532331 GNB5O14775 395 aa10.92□□□□□ -0.66
PTPRK-221ENST00000532331 POU2F1P14859 743 aa10.92□□□□□ -0.66
PTPRK-221ENST00000532331 P2RY2P41231 377 aa10.92□□□□□ -0.66
PTPRK-221ENST00000532331 GDF5P43026 501 aa10.92□□□□□ -0.66
PTPRK-221ENST00000532331 EEFSECP57772 596 aaKnown RBP10.92□□□□□ -0.66
PTPRK-221ENST00000532331 GRM7Q14831 915 aa10.92□□□□□ -0.66
PTPRK-221ENST00000532331 C1orf189Q5VU69 101 aa10.92□□□□□ -0.66
PTPRK-221ENST00000532331 TTLL10Q6ZVT0 673 aa10.92□□□□□ -0.66
PTPRK-221ENST00000532331 RAB43Q86YS6 212 aa10.92□□□□□ -0.66
PTPRK-221ENST00000532331 UBE2J2Q8N2K1 259 aa10.92□□□□□ -0.66
PTPRK-221ENST00000532331 FAM156AQ8NDB6 213 aa10.92□□□□□ -0.66
PTPRK-221ENST00000532331 OR2AJ1Q8NGZ0 328 aa10.92□□□□□ -0.66
PTPRK-221ENST00000532331 OR5K1Q8NHB7 308 aa10.92□□□□□ -0.66
PTPRK-221ENST00000532331 PEX13Q92968 403 aa10.92□□□□□ -0.66
PTPRK-221ENST00000532331 SCRN2Q96FV2 425 aa10.92□□□□□ -0.66
PTPRK-221ENST00000532331 GPR22Q99680 433 aa10.92□□□□□ -0.66
PTPRK-221ENST00000532331 TPK1Q9H3S4 243 aa10.92□□□□□ -0.66
PTPRK-221ENST00000532331 DSN1Q9H410 356 aa10.92□□□□□ -0.66
PTPRK-221ENST00000532331 ZNF823P16415 610 aa10.92□□□□□ -0.66
PTPRK-221ENST00000532331 RPS15AP62244 130 aaKnown RBP10.92□□□□□ -0.66
PTPRK-221ENST00000532331 TMEM44Q2T9K0 475 aa10.92□□□□□ -0.66
PTPRK-221ENST00000532331 TCTE1Q5JU00 501 aa10.92□□□□□ -0.66
PTPRK-221ENST00000532331 C1orf220Q5T0J3 134 aa10.92□□□□□ -0.66
PTPRK-221ENST00000532331 EGFLAMQ63HQ2 1017 aa10.92□□□□□ -0.66
PTPRK-221ENST00000532331 TMIEQ8NEW7 156 aa10.92□□□□□ -0.66
PTPRK-221ENST00000532331 HIST1H2AAQ96QV6 131 aa10.92□□□□□ -0.66
PTPRK-221ENST00000532331 C1QTNF1Q9BXJ1 281 aa10.92□□□□□ -0.66
PTPRK-221ENST00000532331 ZNF717Q9BY31 904 aaPredicted RBP10.92□□□□□ -0.66
PTPRK-221ENST00000532331 AKTIPQ9H8T0 292 aa10.92□□□□□ -0.66
PTPRK-221ENST00000532331 MARCH5Q9NX47 278 aa10.92□□□□□ -0.66
PTPRK-221ENST00000532331 ZIM2Q9NZV7 527 aa10.92□□□□□ -0.66
PTPRK-221ENST00000532331 POMPQ9Y244 141 aa10.92□□□□□ -0.66
PTPRK-221ENST00000532331 TEX264Q9Y6I9 313 aa10.92□□□□□ -0.66
PTPRK-221ENST00000532331 ZNF860A6NHJ4 632 aa10.92□□□□□ -0.66
PTPRK-221ENST00000532331 H3BNX3 289 aa10.92□□□□□ -0.66
PTPRK-221ENST00000532331 ABLIM1O14639 778 aa10.92□□□□□ -0.66
PTPRK-221ENST00000532331 PLOD3O60568 738 aa10.92□□□□□ -0.66
PTPRK-221ENST00000532331 SNX4O95219 450 aa10.92□□□□□ -0.66
PTPRK-221ENST00000532331 SYNGR4O95473 234 aa10.92□□□□□ -0.66
PTPRK-221ENST00000532331 IFNA6P05013 189 aa10.92□□□□□ -0.66
PTPRK-221ENST00000532331 HSF5Q4G112 596 aaPredicted RBP10.92□□□□□ -0.66
PTPRK-221ENST00000532331 DAZLQ92904 295 aaKnown RBP10.92□□□□□ -0.66
PTPRK-221ENST00000532331 SLC35A5Q9BS91 424 aa10.92□□□□□ -0.66
PTPRK-221ENST00000532331 IFT27Q9BW83 186 aa10.92□□□□□ -0.66
PTPRK-221ENST00000532331 PRODH2Q9UF12 536 aa10.92□□□□□ -0.66
PTPRK-221ENST00000532331 TMED5Q9Y3A6 229 aa10.92□□□□□ -0.66
PTPRK-221ENST00000532331 LOC101059915A0A1B0GWI6 518 aaPredicted RBP10.92□□□□□ -0.66
PTPRK-221ENST00000532331 CDC123O75794 336 aaPredicted RBP10.92□□□□□ -0.66
PTPRK-221ENST00000532331 PRAMEF12O95522 483 aa10.92□□□□□ -0.66
PTPRK-221ENST00000532331 JUNP05412 331 aaKnown RBP10.92□□□□□ -0.66
PTPRK-221ENST00000532331 PBX2P40425 430 aa10.92□□□□□ -0.66
PTPRK-221ENST00000532331 ARSFP54793 590 aa10.92□□□□□ -0.66
PTPRK-221ENST00000532331 WNT7BP56706 349 aa10.92□□□□□ -0.66
PTPRK-221ENST00000532331 PPP2R2BQ00005 443 aa10.92□□□□□ -0.66
PTPRK-221ENST00000532331 FAM182AQ5T1J6 154 aa10.92□□□□□ -0.66
PTPRK-221ENST00000532331 LAPTM4BQ86VI4 370 aa10.92□□□□□ -0.66
PTPRK-221ENST00000532331 C10orf82Q8WW14 230 aa10.92□□□□□ -0.66
PTPRK-221ENST00000532331 PGAP3Q96FM1 320 aaPredicted RBP10.92□□□□□ -0.66
PTPRK-221ENST00000532331 CD244Q9BZW8 370 aa10.92□□□□□ -0.66
PTPRK-221ENST00000532331 PLEKHA1Q9HB21 404 aa10.92□□□□□ -0.66
PTPRK-221ENST00000532331 P2RX2Q9UBL9 471 aa10.92□□□□□ -0.66
PTPRK-221ENST00000532331 ING4Q9UNL4 249 aa10.92□□□□□ -0.66
PTPRK-221ENST00000532331 STRCP1A6NGW2 1772 aa10.92□□□□□ -0.66
PTPRK-221ENST00000532331 POLR1CO15160 346 aaPredicted RBP10.92□□□□□ -0.66
PTPRK-221ENST00000532331 RSL1D1O76021 490 aaKnown RBP10.92□□□□□ -0.66
PTPRK-221ENST00000532331 C8orf89P0DMQ9 161 aa10.92□□□□□ -0.66
PTPRK-221ENST00000532331 HOXA9P31269 272 aa10.92□□□□□ -0.66
PTPRK-221ENST00000532331 WDR4P57081 412 aaKnown RBP10.92□□□□□ -0.66
PTPRK-221ENST00000532331 CLDN2P57739 230 aa10.92□□□□□ -0.66
PTPRK-221ENST00000532331 DSTNP60981 165 aa10.92□□□□□ -0.66
PTPRK-221ENST00000532331 C9orf50Q5SZB4 431 aa10.92□□□□□ -0.66
PTPRK-221ENST00000532331 LHX8Q68G74 356 aa10.92□□□□□ -0.66
PTPRK-221ENST00000532331 C2CD4AQ8NCU7 369 aaPredicted RBP10.92□□□□□ -0.66
PTPRK-221ENST00000532331 PJA1Q8NG27 643 aa10.92□□□□□ -0.66
PTPRK-221ENST00000532331 FAM174AQ8TBP5 190 aa10.92□□□□□ -0.66
PTPRK-221ENST00000532331 ZNF689Q96CS4 500 aaPredicted RBP10.92□□□□□ -0.66
PTPRK-221ENST00000532331 PAPPA2Q9BXP8 1791 aa10.91□□□□□ -0.66
PTPRK-221ENST00000532331 OR1I1O60431 355 aa10.91□□□□□ -0.66
PTPRK-221ENST00000532331 IL33O95760 270 aa10.91□□□□□ -0.66
PTPRK-221ENST00000532331 SLC18A1P54219 525 aa10.91□□□□□ -0.66
PTPRK-221ENST00000532331 TARDBPQ13148 414 aaKnown RBP eCLIP10.91□□□□□ -0.66
PTPRK-221ENST00000532331 EID2Q8N6I1 236 aa10.91□□□□□ -0.66
PTPRK-221ENST00000532331 NODALQ96S42 347 aa10.91□□□□□ -0.66
PTPRK-221ENST00000532331 CMKLR1Q99788 373 aa10.91□□□□□ -0.66
PTPRK-221ENST00000532331 STRA6Q9BX79 667 aa10.91□□□□□ -0.66
PTPRK-221ENST00000532331 RNF38Q9H0F5 515 aa10.91□□□□□ -0.66
PTPRK-221ENST00000532331 GALPQ9UBC7 116 aa10.91□□□□□ -0.66
PTPRK-221ENST00000532331 SCN7AQ01118 1682 aa10.91□□□□□ -0.66
PTPRK-221ENST00000532331 CPSF4LA6NMK7 179 aaKnown RBP10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms