RNA–Protein interactions for RNA: ENST00000532126.1

HMGB1P42-201, Transcript of high mobility group box 1 pseudogene 42, humanhuman

BASIC

Gene HMGB1P42, Length 553 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P42-201ENST00000532126 KMT5CQ86Y97 462 aa5.57□□□□□ -1.52
HMGB1P42-201ENST00000532126 DCUN1D3Q8IWE4 304 aa5.57□□□□□ -1.52
HMGB1P42-201ENST00000532126 CNTN4Q8IWV2 1026 aa5.57□□□□□ -1.52
HMGB1P42-201ENST00000532126 CTAGE4Q8IX94 777 aa5.57□□□□□ -1.52
HMGB1P42-201ENST00000532126 SPACA3Q8IXA5 215 aa5.57□□□□□ -1.52
HMGB1P42-201ENST00000532126 ZBED8Q8IZ13 594 aa5.57□□□□□ -1.52
HMGB1P42-201ENST00000532126 CARFQ8N187 725 aa5.57□□□□□ -1.52
HMGB1P42-201ENST00000532126 RAB42Q8N4Z0 105 aa5.57□□□□□ -1.52
HMGB1P42-201ENST00000532126 ZBTB2Q8N680 514 aa5.57□□□□□ -1.52
HMGB1P42-201ENST00000532126 BMPERQ8N8U9 685 aa5.57□□□□□ -1.52
HMGB1P42-201ENST00000532126 SIDT2Q8NBJ9 832 aaKnown RBP5.57□□□□□ -1.52
HMGB1P42-201ENST00000532126 C2CD4AQ8NCU7 369 aaPredicted RBP5.57□□□□□ -1.52
HMGB1P42-201ENST00000532126 FBXO36Q8NEA4 188 aa5.57□□□□□ -1.52
HMGB1P42-201ENST00000532126 MAGEC3Q8TD91 643 aa5.57□□□□□ -1.52
HMGB1P42-201ENST00000532126 BRIX1Q8TDN6 353 aaKnown RBP5.57□□□□□ -1.52
HMGB1P42-201ENST00000532126 PYROXD1Q8WU10 500 aa5.57□□□□□ -1.52
HMGB1P42-201ENST00000532126 KCNJ9Q92806 393 aa5.57□□□□□ -1.52
HMGB1P42-201ENST00000532126 ELMO2Q96JJ3 720 aa5.57□□□□□ -1.52
HMGB1P42-201ENST00000532126 SLC41A2Q96JW4 573 aa5.57□□□□□ -1.52
HMGB1P42-201ENST00000532126 SNX22Q96L94 193 aa5.57□□□□□ -1.52
HMGB1P42-201ENST00000532126 TEFMQ96QE5 360 aaKnown RBP5.57□□□□□ -1.52
HMGB1P42-201ENST00000532126 OR6C1Q96RD1 312 aa5.57□□□□□ -1.52
HMGB1P42-201ENST00000532126 NDNQ99608 321 aa5.57□□□□□ -1.52
HMGB1P42-201ENST00000532126 MAP3K3Q99759 626 aa5.57□□□□□ -1.52
HMGB1P42-201ENST00000532126 WDR83Q9BRX9 315 aaKnown RBP5.57□□□□□ -1.52
HMGB1P42-201ENST00000532126 ZPBPQ9BS86 351 aa5.57□□□□□ -1.52
HMGB1P42-201ENST00000532126 LRRC1Q9BTT6 524 aa5.57□□□□□ -1.52
HMGB1P42-201ENST00000532126 DPH1Q9BZG8 443 aa5.57□□□□□ -1.52
HMGB1P42-201ENST00000532126 PLAC1Q9HBJ0 212 aa5.57□□□□□ -1.52
HMGB1P42-201ENST00000532126 SLC6A20Q9NP91 592 aa5.57□□□□□ -1.52
HMGB1P42-201ENST00000532126 FBXO8Q9NRD0 319 aa5.57□□□□□ -1.52
HMGB1P42-201ENST00000532126 SACM1LQ9NTJ5 587 aa5.57□□□□□ -1.52
HMGB1P42-201ENST00000532126 SOHLH2Q9NX45 425 aa5.57□□□□□ -1.52
HMGB1P42-201ENST00000532126 GRHL1Q9NZI5 618 aa5.57□□□□□ -1.52
HMGB1P42-201ENST00000532126 OR6C2Q9NZP2 312 aa5.57□□□□□ -1.52
HMGB1P42-201ENST00000532126 FOXJ2Q9P0K8 574 aa5.57□□□□□ -1.52
HMGB1P42-201ENST00000532126 ACSL6Q9UKU0 697 aa5.57□□□□□ -1.52
HMGB1P42-201ENST00000532126 POMT2Q9UKY4 750 aa5.57□□□□□ -1.52
HMGB1P42-201ENST00000532126 PLAGL1Q9UM63 463 aa5.57□□□□□ -1.52
HMGB1P42-201ENST00000532126 ICKQ9UPZ9 632 aa5.57□□□□□ -1.52
HMGB1P42-201ENST00000532126 ACACBO00763 2458 aa5.56□□□□□ -1.52
HMGB1P42-201ENST00000532126 MYLKQ15746 1914 aa5.56□□□□□ -1.52
HMGB1P42-201ENST00000532126 C7orf72A4D263 438 aa5.56□□□□□ -1.52
HMGB1P42-201ENST00000532126 SLC9B1P1A6NJY1 282 aa5.56□□□□□ -1.52
HMGB1P42-201ENST00000532126 AP3D1O14617 1153 aa5.56□□□□□ -1.52
HMGB1P42-201ENST00000532126 EIF3HO15372 352 aaKnown RBP eCLIP5.56□□□□□ -1.52
HMGB1P42-201ENST00000532126 MATN4O95460 622 aa5.56□□□□□ -1.52
HMGB1P42-201ENST00000532126 C1orf105O95561 183 aa5.56□□□□□ -1.52
HMGB1P42-201ENST00000532126 ZBTB11O95625 1053 aaPredicted RBP5.56□□□□□ -1.52
HMGB1P42-201ENST00000532126 AHSGP02765 367 aa5.56□□□□□ -1.52
HMGB1P42-201ENST00000532126 CHRM5P08912 532 aaPredicted RBP5.56□□□□□ -1.52
HMGB1P42-201ENST00000532126 TPBGLP0DKB5 382 aa5.56□□□□□ -1.52
HMGB1P42-201ENST00000532126 LIPCP11150 499 aa5.56□□□□□ -1.52
HMGB1P42-201ENST00000532126 ENO3P13929 434 aaPredicted RBP5.56□□□□□ -1.52
HMGB1P42-201ENST00000532126 FOLR1P15328 257 aa5.56□□□□□ -1.52
HMGB1P42-201ENST00000532126 UGT2B7P16662 529 aa5.56□□□□□ -1.52
HMGB1P42-201ENST00000532126 CD9P21926 228 aa5.56□□□□□ -1.52
HMGB1P42-201ENST00000532126 CDH3P22223 829 aa5.56□□□□□ -1.52
HMGB1P42-201ENST00000532126 MCM3P25205 808 aa5.56□□□□□ -1.52
HMGB1P42-201ENST00000532126 ITPKBP27987 946 aa5.56□□□□□ -1.52
HMGB1P42-201ENST00000532126 GABRB3P28472 473 aa5.56□□□□□ -1.52
HMGB1P42-201ENST00000532126 PKLRP30613 574 aa5.56□□□□□ -1.52
HMGB1P42-201ENST00000532126 SKIV2L2P42285 1042 aaKnown RBP5.56□□□□□ -1.52
HMGB1P42-201ENST00000532126 UCNP55089 124 aa5.56□□□□□ -1.52
HMGB1P42-201ENST00000532126 TMPRSS3P57727 454 aa5.56□□□□□ -1.52
HMGB1P42-201ENST00000532126 BPIFB3P59826 476 aa5.56□□□□□ -1.52
HMGB1P42-201ENST00000532126 RAC1P63000 192 aa5.56□□□□□ -1.52
HMGB1P42-201ENST00000532126 GUCY2DQ02846 1103 aa5.56□□□□□ -1.52
HMGB1P42-201ENST00000532126 ACY1Q03154 408 aa5.56□□□□□ -1.52
HMGB1P42-201ENST00000532126 TLE3Q04726 772 aa5.56□□□□□ -1.52
HMGB1P42-201ENST00000532126 CHAF1BQ13112 559 aa5.56□□□□□ -1.52
HMGB1P42-201ENST00000532126 TUBB3Q13509 450 aa5.56□□□□□ -1.52
HMGB1P42-201ENST00000532126 CUL1Q13616 776 aa5.56□□□□□ -1.52
HMGB1P42-201ENST00000532126 GRB7Q14451 532 aa5.56□□□□□ -1.52
HMGB1P42-201ENST00000532126 KCNAB1Q14722 419 aa5.56□□□□□ -1.52
HMGB1P42-201ENST00000532126 KIR2DS3Q14952 304 aa5.56□□□□□ -1.52
HMGB1P42-201ENST00000532126 TGIF1Q15583 401 aa5.56□□□□□ -1.52
HMGB1P42-201ENST00000532126 TRADDQ15628 312 aa5.56□□□□□ -1.52
HMGB1P42-201ENST00000532126 KYNUQ16719 465 aa5.56□□□□□ -1.52
HMGB1P42-201ENST00000532126 KLHL38Q2WGJ6 581 aa5.56□□□□□ -1.52
HMGB1P42-201ENST00000532126 TMTC4Q5T4D3 741 aa5.56□□□□□ -1.52
HMGB1P42-201ENST00000532126 TEDDM1Q5T9Z0 273 aa5.56□□□□□ -1.52
HMGB1P42-201ENST00000532126 LIN54Q6MZP7 749 aa5.56□□□□□ -1.52
HMGB1P42-201ENST00000532126 UGT3A1Q6NUS8 523 aa5.56□□□□□ -1.52
HMGB1P42-201ENST00000532126 FDX2Q6P4F2 183 aa5.56□□□□□ -1.52
HMGB1P42-201ENST00000532126 TRMT10BQ6PF06 316 aaKnown RBP5.56□□□□□ -1.52
HMGB1P42-201ENST00000532126 C19orf48Q6RUI8 117 aa5.56□□□□□ -1.52
HMGB1P42-201ENST00000532126 ZDHHC24Q6UX98 284 aa5.56□□□□□ -1.52
HMGB1P42-201ENST00000532126 CCDC91Q7Z6B0 441 aa5.56□□□□□ -1.52
HMGB1P42-201ENST00000532126 CCDC25Q86WR0 208 aa5.56□□□□□ -1.52
HMGB1P42-201ENST00000532126 PPP1R3BQ86XI6 285 aa5.56□□□□□ -1.52
HMGB1P42-201ENST00000532126 ARMC8Q8IUR7 673 aa5.56□□□□□ -1.52
HMGB1P42-201ENST00000532126 RASGRP3Q8IV61 690 aa5.56□□□□□ -1.52
HMGB1P42-201ENST00000532126 PALM2Q8IXS6 379 aa5.56□□□□□ -1.52
HMGB1P42-201ENST00000532126 ADGRF3Q8IZF5 1079 aa5.56□□□□□ -1.52
HMGB1P42-201ENST00000532126 Q8N1Y9 231 aa5.56□□□□□ -1.52
HMGB1P42-201ENST00000532126 MMGT1Q8N4V1 131 aa5.56□□□□□ -1.52
HMGB1P42-201ENST00000532126 GIMAP7Q8NHV1 300 aa5.56□□□□□ -1.52
HMGB1P42-201ENST00000532126 UHMK1Q8TAS1 419 aaKnown RBP5.56□□□□□ -1.52
HMGB1P42-201ENST00000532126 PIWIL2Q8TC59 973 aaKnown RBP5.56□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms