RNA–Protein interactions for RNA: ENST00000532088.1

COPB1-208, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 3

Gene COPB1, Length 510 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-208ENST00000532088 ARFIP1P53367 373 aa11.95□□□□□ -0.5
COPB1-208ENST00000532088 MC2RQ01718 297 aa11.95□□□□□ -0.5
COPB1-208ENST00000532088 IL11RAQ14626 422 aa11.95□□□□□ -0.5
COPB1-208ENST00000532088 C16orf72Q14CZ0 275 aa11.95□□□□□ -0.5
COPB1-208ENST00000532088 ZRSR2Q15696 482 aaKnown RBP11.95□□□□□ -0.5
COPB1-208ENST00000532088 CCDC157Q569K6 752 aa11.95□□□□□ -0.5
COPB1-208ENST00000532088 SNAP47Q5SQN1 464 aa11.95□□□□□ -0.5
COPB1-208ENST00000532088 YOD1Q5VVQ6 348 aaPredicted RBP11.95□□□□□ -0.5
COPB1-208ENST00000532088 CES4AQ5XG92 561 aa11.95□□□□□ -0.5
COPB1-208ENST00000532088 KANK2Q63ZY3 851 aa11.95□□□□□ -0.5
COPB1-208ENST00000532088 FRG2Q64ET8 278 aa11.95□□□□□ -0.5
COPB1-208ENST00000532088 MTERF4Q7Z6M4 381 aaKnown RBP11.95□□□□□ -0.5
COPB1-208ENST00000532088 MCATQ8IVS2 390 aaKnown RBP11.95□□□□□ -0.5
COPB1-208ENST00000532088 BMPERQ8N8U9 685 aa11.95□□□□□ -0.5
COPB1-208ENST00000532088 CAMKVQ8NCB2 501 aa11.95□□□□□ -0.5
COPB1-208ENST00000532088 OR7G3Q8NG95 312 aa11.95□□□□□ -0.5
COPB1-208ENST00000532088 NT5CQ8TCD5 201 aa11.95□□□□□ -0.5
COPB1-208ENST00000532088 USP7Q93009 1102 aa11.95□□□□□ -0.5
COPB1-208ENST00000532088 RERGQ96A58 199 aaPredicted RBP11.95□□□□□ -0.5
COPB1-208ENST00000532088 TM4SF19Q96DZ7 209 aa11.95□□□□□ -0.5
COPB1-208ENST00000532088 MOCOSQ96EN8 888 aa11.95□□□□□ -0.5
COPB1-208ENST00000532088 FRG2BQ96QU4 278 aa11.95□□□□□ -0.5
COPB1-208ENST00000532088 SPNS1Q9H2V7 528 aa11.95□□□□□ -0.5
COPB1-208ENST00000532088 BRF2Q9HAW0 419 aa11.95□□□□□ -0.5
COPB1-208ENST00000532088 ZNF490Q9ULM2 529 aaPredicted RBP11.95□□□□□ -0.5
COPB1-208ENST00000532088 KLHL20Q9Y2M5 609 aa11.95□□□□□ -0.5
COPB1-208ENST00000532088 ADAMTS20P59510 1910 aa11.94□□□□□ -0.5
COPB1-208ENST00000532088 FEZF1A0PJY2 475 aa11.94□□□□□ -0.5
COPB1-208ENST00000532088 ANKDD1BA6NHY2 528 aa11.94□□□□□ -0.5
COPB1-208ENST00000532088 A8MU76 341 aa11.94□□□□□ -0.5
COPB1-208ENST00000532088 NPIPB8E9PQR5 432 aa11.94□□□□□ -0.5
COPB1-208ENST00000532088 H3BMH7 237 aa11.94□□□□□ -0.5
COPB1-208ENST00000532088 ZSCAN9O15535 394 aaPredicted RBP11.94□□□□□ -0.5
COPB1-208ENST00000532088 ITM2AO43736 263 aa11.94□□□□□ -0.5
COPB1-208ENST00000532088 OR1F1O43749 312 aa11.94□□□□□ -0.5
COPB1-208ENST00000532088 LCMT2O60294 686 aaKnown RBP11.94□□□□□ -0.5
COPB1-208ENST00000532088 CRCPO75575 148 aa11.94□□□□□ -0.5
COPB1-208ENST00000532088 SNRNP200O75643 2136 aaKnown RBP11.94□□□□□ -0.5
COPB1-208ENST00000532088 CHEK2O96017 543 aa11.94□□□□□ -0.5
COPB1-208ENST00000532088 CAPN1P07384 714 aa11.94□□□□□ -0.5
COPB1-208ENST00000532088 SERPINA6P08185 405 aa11.94□□□□□ -0.5
COPB1-208ENST00000532088 SLC35G6P0C7Q6 338 aa11.94□□□□□ -0.5
COPB1-208ENST00000532088 FGF5P12034 268 aa11.94□□□□□ -0.5
COPB1-208ENST00000532088 HMOX2P30519 316 aa11.94□□□□□ -0.5
COPB1-208ENST00000532088 SEPHS1P49903 392 aa11.94□□□□□ -0.5
COPB1-208ENST00000532088 RPL14P50914 215 aaKnown RBP11.94□□□□□ -0.5
COPB1-208ENST00000532088 IFT88Q13099 833 aa11.94□□□□□ -0.5
COPB1-208ENST00000532088 RBBP5Q15291 538 aaKnown RBP11.94□□□□□ -0.5
COPB1-208ENST00000532088 CPSF6Q16630 551 aaKnown RBP eCLIP11.94□□□□□ -0.5
COPB1-208ENST00000532088 GARNL3Q5VVW2 1013 aa11.94□□□□□ -0.5
COPB1-208ENST00000532088 TLDC1Q6P9B6 456 aa11.94□□□□□ -0.5
COPB1-208ENST00000532088 ASPGQ86U10 573 aa11.94□□□□□ -0.5
COPB1-208ENST00000532088 MYLK4Q86YV6 388 aaPredicted RBP11.94□□□□□ -0.5
COPB1-208ENST00000532088 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP11.94□□□□□ -0.5
COPB1-208ENST00000532088 CDYL2Q8N8U2 506 aa11.94□□□□□ -0.5
COPB1-208ENST00000532088 GBP7Q8N8V2 638 aaPredicted RBP11.94□□□□□ -0.5
COPB1-208ENST00000532088 ANKRD53Q8N9V6 530 aa11.94□□□□□ -0.5
COPB1-208ENST00000532088 RCBTB1Q8NDN9 531 aa11.94□□□□□ -0.5
COPB1-208ENST00000532088 ZNF740Q8NDX6 193 aa11.94□□□□□ -0.5
COPB1-208ENST00000532088 WDR36Q8NI36 951 aaKnown RBP11.94□□□□□ -0.5
COPB1-208ENST00000532088 METTL6Q8TCB7 284 aa11.94□□□□□ -0.5
COPB1-208ENST00000532088 CREB3L4Q8TEY5 395 aa11.94□□□□□ -0.5
COPB1-208ENST00000532088 ZNF501Q96CX3 271 aaPredicted RBP11.94□□□□□ -0.5
COPB1-208ENST00000532088 ZNF837Q96EG3 531 aaPredicted RBP11.94□□□□□ -0.5
COPB1-208ENST00000532088 ZPBPQ9BS86 351 aa11.94□□□□□ -0.5
COPB1-208ENST00000532088 NLNQ9BYT8 704 aa11.94□□□□□ -0.5
COPB1-208ENST00000532088 C20orf27Q9GZN8 174 aa11.94□□□□□ -0.5
COPB1-208ENST00000532088 KLHL25Q9H0H3 589 aa11.94□□□□□ -0.5
COPB1-208ENST00000532088 ELOVL6Q9H5J4 265 aa11.94□□□□□ -0.5
COPB1-208ENST00000532088 PFDN4Q9NQP4 134 aa11.94□□□□□ -0.5
COPB1-208ENST00000532088 ACSS2Q9NR19 701 aa11.94□□□□□ -0.5
COPB1-208ENST00000532088 FGF21Q9NSA1 209 aa11.94□□□□□ -0.5
COPB1-208ENST00000532088 SERTAD3Q9UJW9 196 aa11.94□□□□□ -0.5
COPB1-208ENST00000532088 LOXL2Q9Y4K0 774 aa11.94□□□□□ -0.5
COPB1-208ENST00000532088 TRAF6Q9Y4K3 522 aa11.94□□□□□ -0.5
COPB1-208ENST00000532088 PCDHGA8Q9Y5G5 932 aa11.94□□□□□ -0.5
COPB1-208ENST00000532088 A0A0J9YVX5 310 aa11.93□□□□□ -0.5
COPB1-208ENST00000532088 DCDC2BA2VCK2 349 aa11.93□□□□□ -0.5
COPB1-208ENST00000532088 URADA6NGE7 173 aa11.93□□□□□ -0.5
COPB1-208ENST00000532088 H0YGG7 62 aa11.93□□□□□ -0.5
COPB1-208ENST00000532088 NRP2O60462 931 aa11.93□□□□□ -0.5
COPB1-208ENST00000532088 PRAMEF10O60809 474 aa11.93□□□□□ -0.5
COPB1-208ENST00000532088 ULK1O75385 1050 aa11.93□□□□□ -0.5
COPB1-208ENST00000532088 LYPLA1O75608 230 aaPredicted RBP11.93□□□□□ -0.5
COPB1-208ENST00000532088 VSIG8P0DPA2 414 aa11.93□□□□□ -0.5
COPB1-208ENST00000532088 FOLR1P15328 257 aa11.93□□□□□ -0.5
COPB1-208ENST00000532088 CCR10P46092 362 aa11.93□□□□□ -0.5
COPB1-208ENST00000532088 ITGA1P56199 1179 aa11.93□□□□□ -0.5
COPB1-208ENST00000532088 ARF3P61204 181 aaPredicted RBP11.93□□□□□ -0.5
COPB1-208ENST00000532088 STXBP1P61764 594 aaKnown RBP11.93□□□□□ -0.5
COPB1-208ENST00000532088 MEF2AQ02078 507 aaPredicted RBP11.93□□□□□ -0.5
COPB1-208ENST00000532088 RGS1Q08116 209 aa11.93□□□□□ -0.5
COPB1-208ENST00000532088 CSTF3Q12996 717 aaKnown RBP11.93□□□□□ -0.5
COPB1-208ENST00000532088 TUBB3Q13509 450 aa11.93□□□□□ -0.5
COPB1-208ENST00000532088 UBAP2LQ14157 1087 aaKnown RBP11.93□□□□□ -0.5
COPB1-208ENST00000532088 PRTGQ2VWP7 1150 aa11.93□□□□□ -0.5
COPB1-208ENST00000532088 ADPRMQ3LIE5 342 aa11.93□□□□□ -0.5
COPB1-208ENST00000532088 UGT3A2Q3SY77 523 aa11.93□□□□□ -0.5
COPB1-208ENST00000532088 SH2D4BQ5SQS7 431 aa11.93□□□□□ -0.5
COPB1-208ENST00000532088 TTC19Q6DKK2 380 aaPredicted RBP11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms