RNA–Protein interactions for RNA: ENST00000531556.1

AP004247.1-201, humanhuman

BASIC

Gene AP004247.1, Length 1,289 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP004247.1-201ENST00000531556 NHSL2Q5HYW2 709 aa3.2□□□□□ -1.9
AP004247.1-201ENST00000531556 CASC4Q6P4E1 433 aa3.2□□□□□ -1.9
AP004247.1-201ENST00000531556 ZNF613Q6PF04 617 aa3.2□□□□□ -1.9
AP004247.1-201ENST00000531556 TRIM65Q6PJ69 517 aa3.2□□□□□ -1.9
AP004247.1-201ENST00000531556 DHRS11Q6UWP2 260 aa3.2□□□□□ -1.9
AP004247.1-201ENST00000531556 C5orf24Q7Z6I8 188 aa3.2□□□□□ -1.9
AP004247.1-201ENST00000531556 ANKRD23Q86SG2 305 aa3.2□□□□□ -1.9
AP004247.1-201ENST00000531556 MEX3DQ86XN8 651 aaKnown RBP3.2□□□□□ -1.9
AP004247.1-201ENST00000531556 TICAM2Q86XR7 235 aa3.2□□□□□ -1.9
AP004247.1-201ENST00000531556 UXS1Q8NBZ7 420 aa3.2□□□□□ -1.9
AP004247.1-201ENST00000531556 OR4D10Q8NGI6 311 aa3.2□□□□□ -1.9
AP004247.1-201ENST00000531556 TSSK2Q96PF2 358 aa3.2□□□□□ -1.9
AP004247.1-201ENST00000531556 ALKBH7Q9BT30 221 aaPredicted RBP3.2□□□□□ -1.9
AP004247.1-201ENST00000531556 DNAI2Q9GZS0 605 aa3.2□□□□□ -1.9
AP004247.1-201ENST00000531556 WWTR1Q9GZV5 400 aa3.2□□□□□ -1.9
AP004247.1-201ENST00000531556 MED20Q9H944 212 aa3.2□□□□□ -1.9
AP004247.1-201ENST00000531556 CDH7Q9ULB5 785 aa3.2□□□□□ -1.9
AP004247.1-201ENST00000531556 PA2G4Q9UQ80 394 aaKnown RBP3.2□□□□□ -1.9
AP004247.1-201ENST00000531556 COLEC10Q9Y6Z7 277 aa3.2□□□□□ -1.9
AP004247.1-201ENST00000531556 SPATA31D1Q6ZQQ2 1576 aa3.2□□□□□ -1.9
AP004247.1-201ENST00000531556 A0A087WZ39 114 aa3.19□□□□□ -1.9
AP004247.1-201ENST00000531556 MEX3AA1L020 520 aaKnown RBP3.19□□□□□ -1.9
AP004247.1-201ENST00000531556 OOEPA6NGQ2 149 aa3.19□□□□□ -1.9
AP004247.1-201ENST00000531556 MPTX1A8MV57 137 aa3.19□□□□□ -1.9
AP004247.1-201ENST00000531556 E5RGE8 158 aa3.19□□□□□ -1.9
AP004247.1-201ENST00000531556 H0Y626 953 aa3.19□□□□□ -1.9
AP004247.1-201ENST00000531556 SLC1A7O00341 560 aa3.19□□□□□ -1.9
AP004247.1-201ENST00000531556 PSMA7O14818 248 aa3.19□□□□□ -1.9
AP004247.1-201ENST00000531556 DCXO43602 365 aa3.19□□□□□ -1.9
AP004247.1-201ENST00000531556 KIF5CO60282 957 aa3.19□□□□□ -1.9
AP004247.1-201ENST00000531556 SLU7O95391 586 aaKnown RBP3.19□□□□□ -1.9
AP004247.1-201ENST00000531556 DLATP10515 647 aaKnown RBP3.19□□□□□ -1.9
AP004247.1-201ENST00000531556 OR3A1P47881 315 aa3.19□□□□□ -1.9
AP004247.1-201ENST00000531556 KCNJ1P48048 391 aa3.19□□□□□ -1.9
AP004247.1-201ENST00000531556 GSCP56915 257 aaPredicted RBP3.19□□□□□ -1.9
AP004247.1-201ENST00000531556 NECTIN1Q15223 517 aa3.19□□□□□ -1.9
AP004247.1-201ENST00000531556 MTHFSDQ2M296 383 aaKnown RBP3.19□□□□□ -1.9
AP004247.1-201ENST00000531556 FASTKD1Q53R41 847 aaKnown RBP3.19□□□□□ -1.9
AP004247.1-201ENST00000531556 ZNF542PQ5EBM4 170 aa3.19□□□□□ -1.9
AP004247.1-201ENST00000531556 CES4AQ5XG92 561 aa3.19□□□□□ -1.9
AP004247.1-201ENST00000531556 ZNF770Q6IQ21 691 aaPredicted RBP3.19□□□□□ -1.9
AP004247.1-201ENST00000531556 KLHL10Q6JEL2 608 aa3.19□□□□□ -1.9
AP004247.1-201ENST00000531556 FAAP20Q6NZ36 180 aa3.19□□□□□ -1.9
AP004247.1-201ENST00000531556 KIF6Q6ZMV9 814 aa3.19□□□□□ -1.9
AP004247.1-201ENST00000531556 FRRS1Q6ZNA5 592 aa3.19□□□□□ -1.9
AP004247.1-201ENST00000531556 CHMP1BQ7LBR1 199 aa3.19□□□□□ -1.9
AP004247.1-201ENST00000531556 COX8CQ7Z4L0 72 aa3.19□□□□□ -1.9
AP004247.1-201ENST00000531556 LRRTM1Q86UE6 522 aa3.19□□□□□ -1.9
AP004247.1-201ENST00000531556 LYG1Q8N1E2 194 aa3.19□□□□□ -1.9
AP004247.1-201ENST00000531556 ATAD1Q8NBU5 361 aa3.19□□□□□ -1.9
AP004247.1-201ENST00000531556 NUP37Q8NFH4 326 aa3.19□□□□□ -1.9
AP004247.1-201ENST00000531556 OVOL2Q9BRP0 275 aa3.19□□□□□ -1.9
AP004247.1-201ENST00000531556 LSG1Q9H089 658 aaKnown RBP3.19□□□□□ -1.9
AP004247.1-201ENST00000531556 C5orf66Q9H5L9 145 aa3.19□□□□□ -1.9
AP004247.1-201ENST00000531556 MTHFD2LQ9H903 347 aaPredicted RBP3.19□□□□□ -1.9
AP004247.1-201ENST00000531556 EXOC1Q9NV70 894 aa3.19□□□□□ -1.9
AP004247.1-201ENST00000531556 ARMCX3Q9UH62 379 aaPredicted RBP3.19□□□□□ -1.9
AP004247.1-201ENST00000531556 NOCTQ9UK39 431 aaKnown RBP3.19□□□□□ -1.9
AP004247.1-201ENST00000531556 GMEB2Q9UKD1 530 aa3.19□□□□□ -1.9
AP004247.1-201ENST00000531556 POMT2Q9UKY4 750 aa3.19□□□□□ -1.9
AP004247.1-201ENST00000531556 NSG2Q9Y328 171 aa3.19□□□□□ -1.9
AP004247.1-201ENST00000531556 RNF215Q9Y6U7 377 aa3.19□□□□□ -1.9
AP004247.1-201ENST00000531556 ILVBLA1L0T0 632 aa3.18□□□□□ -1.9
AP004247.1-201ENST00000531556 KPNA7A9QM74 516 aa3.18□□□□□ -1.9
AP004247.1-201ENST00000531556 PALM2-AKAP2B1ALY0 433 aaPredicted RBP3.18□□□□□ -1.9
AP004247.1-201ENST00000531556 KBTBD13C9JR72 458 aa3.18□□□□□ -1.9
AP004247.1-201ENST00000531556 NPIPB9F8W1W9 429 aa3.18□□□□□ -1.9
AP004247.1-201ENST00000531556 RTCAO00442 366 aaKnown RBP3.18□□□□□ -1.9
AP004247.1-201ENST00000531556 SURF4O15260 269 aa3.18□□□□□ -1.9
AP004247.1-201ENST00000531556 EEF2P13639 858 aaKnown RBP3.18□□□□□ -1.9
AP004247.1-201ENST00000531556 MYOGP15173 224 aa3.18□□□□□ -1.9
AP004247.1-201ENST00000531556 UGT1A4P22310 534 aa3.18□□□□□ -1.9
AP004247.1-201ENST00000531556 PIK3R1P27986 724 aa3.18□□□□□ -1.9
AP004247.1-201ENST00000531556 CCND3P30281 292 aaPredicted RBP3.18□□□□□ -1.9
AP004247.1-201ENST00000531556 HNF4AP41235 474 aa3.18□□□□□ -1.9
AP004247.1-201ENST00000531556 OR3A3P47888 321 aa3.18□□□□□ -1.9
AP004247.1-201ENST00000531556 NPBWR1P48145 328 aa3.18□□□□□ -1.9
AP004247.1-201ENST00000531556 MEP1BQ16820 701 aa3.18□□□□□ -1.9
AP004247.1-201ENST00000531556 FAM106AQ4KMX7 169 aa3.18□□□□□ -1.9
AP004247.1-201ENST00000531556 ATP1A1-AS1Q5TC04 95 aa3.18□□□□□ -1.9
AP004247.1-201ENST00000531556 ZER1Q7Z7L7 766 aa3.18□□□□□ -1.9
AP004247.1-201ENST00000531556 ANKRD46Q86W74 232 aa3.18□□□□□ -1.9
AP004247.1-201ENST00000531556 AMER3Q8N944 861 aa3.18□□□□□ -1.9
AP004247.1-201ENST00000531556 AFAP1L1Q8TED9 768 aa3.18□□□□□ -1.9
AP004247.1-201ENST00000531556 CHURC1Q8WUH1 139 aa3.18□□□□□ -1.9
AP004247.1-201ENST00000531556 CASP10Q92851 521 aa3.18□□□□□ -1.9
AP004247.1-201ENST00000531556 OMA1Q96E52 524 aa3.18□□□□□ -1.9
AP004247.1-201ENST00000531556 C18orf12Q96KH6 178 aa3.18□□□□□ -1.9
AP004247.1-201ENST00000531556 JAKMIP1Q96N16 626 aaKnown RBP3.18□□□□□ -1.9
AP004247.1-201ENST00000531556 AGAP3Q96P47 875 aa3.18□□□□□ -1.9
AP004247.1-201ENST00000531556 IWS1Q96ST2 819 aa3.18□□□□□ -1.9
AP004247.1-201ENST00000531556 ATG101Q9BSB4 218 aa3.18□□□□□ -1.9
AP004247.1-201ENST00000531556 TRIM51Q9BSJ1 452 aa3.18□□□□□ -1.9
AP004247.1-201ENST00000531556 UPF3AQ9H1J1 476 aaKnown RBP3.18□□□□□ -1.9
AP004247.1-201ENST00000531556 RPF1Q9H9Y2 349 aaKnown RBP3.18□□□□□ -1.9
AP004247.1-201ENST00000531556 TUFT1Q9NNX1 390 aa3.18□□□□□ -1.9
AP004247.1-201ENST00000531556 B3GAT2Q9NPZ5 323 aa3.18□□□□□ -1.9
AP004247.1-201ENST00000531556 PDRG1Q9NUG6 133 aa3.18□□□□□ -1.9
AP004247.1-201ENST00000531556 SLCO1C1Q9NYB5 712 aa3.18□□□□□ -1.9
AP004247.1-201ENST00000531556 SEPT10Q9P0V9 454 aa3.18□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms