RNA–Protein interactions for RNA: ENST00000531303.5

SMPD1-205, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene SMPD1, Length 1,451 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-205ENST00000531303 GLRX5Q86SX6 157 aa18.18■□□□□ 0.5
SMPD1-205ENST00000531303 KMT5CQ86Y97 462 aa18.18■□□□□ 0.5
SMPD1-205ENST00000531303 D2HGDHQ8N465 521 aa18.18■□□□□ 0.5
SMPD1-205ENST00000531303 CSNK1A1LQ8N752 337 aa18.18■□□□□ 0.5
SMPD1-205ENST00000531303 CMTM7Q96FZ5 175 aa18.18■□□□□ 0.5
SMPD1-205ENST00000531303 CCT7Q99832 543 aa18.18■□□□□ 0.5
SMPD1-205ENST00000531303 MS4A8Q9BY19 250 aa18.18■□□□□ 0.5
SMPD1-205ENST00000531303 KLHL31Q9H511 634 aa18.18■□□□□ 0.5
SMPD1-205ENST00000531303 BRF2Q9HAW0 419 aa18.18■□□□□ 0.5
SMPD1-205ENST00000531303 VPS29Q9UBQ0 182 aa18.18■□□□□ 0.5
SMPD1-205ENST00000531303 APOBEC2Q9Y235 224 aaKnown RBP18.18■□□□□ 0.5
SMPD1-205ENST00000531303 CCL27Q9Y4X3 112 aa18.18■□□□□ 0.5
SMPD1-205ENST00000531303 SEC22BO75396 215 aa18.17■□□□□ 0.5
SMPD1-205ENST00000531303 TBX6O95947 436 aaPredicted RBP18.17■□□□□ 0.5
SMPD1-205ENST00000531303 ANKRD34CP0C6C1 535 aa18.17■□□□□ 0.5
SMPD1-205ENST00000531303 HNRNPH1P31943 449 aaKnown RBP18.17■□□□□ 0.5
SMPD1-205ENST00000531303 SIM1P81133 766 aaPredicted RBP18.17■□□□□ 0.5
SMPD1-205ENST00000531303 ZNF33BQ06732 778 aa18.17■□□□□ 0.5
SMPD1-205ENST00000531303 RGS1Q08116 209 aa18.17■□□□□ 0.5
SMPD1-205ENST00000531303 HKDC1Q2TB90 917 aa18.17■□□□□ 0.5
SMPD1-205ENST00000531303 AP5B1Q2VPB7 878 aa18.17■□□□□ 0.5
SMPD1-205ENST00000531303 LSM12Q3MHD2 195 aaKnown RBP18.17■□□□□ 0.5
SMPD1-205ENST00000531303 ATP6AP1LQ52LC2 224 aa18.17■□□□□ 0.5
SMPD1-205ENST00000531303 GKAP1Q5VSY0 366 aaPredicted RBP18.17■□□□□ 0.5
SMPD1-205ENST00000531303 HOMEZQ8IX15 550 aa18.17■□□□□ 0.5
SMPD1-205ENST00000531303 KCT2Q8NC54 265 aa18.17■□□□□ 0.5
SMPD1-205ENST00000531303 CAMKVQ8NCB2 501 aa18.17■□□□□ 0.5
SMPD1-205ENST00000531303 APIPQ96GX9 242 aa18.17■□□□□ 0.5
SMPD1-205ENST00000531303 SERPINI1Q99574 410 aa18.17■□□□□ 0.5
SMPD1-205ENST00000531303 MRPL1Q9BYD6 325 aaKnown RBP18.17■□□□□ 0.5
SMPD1-205ENST00000531303 LRTM1Q9HBL6 345 aa18.17■□□□□ 0.5
SMPD1-205ENST00000531303 TCF7L2Q9NQB0 619 aa18.17■□□□□ 0.5
SMPD1-205ENST00000531303 PSD3Q9NYI0 1048 aa18.17■□□□□ 0.5
SMPD1-205ENST00000531303 PCDHGA1Q9Y5H4 931 aa18.17■□□□□ 0.5
SMPD1-205ENST00000531303 ADAMTS20P59510 1910 aa18.17■□□□□ 0.5
SMPD1-205ENST00000531303 A0A0G2JN53 185 aa18.16■□□□□ 0.5
SMPD1-205ENST00000531303 SERTM1A2A2V5 107 aa18.16■□□□□ 0.5
SMPD1-205ENST00000531303 TMEM150CB9EJG8 249 aa18.16■□□□□ 0.5
SMPD1-205ENST00000531303 E9PBE3 544 aa18.16■□□□□ 0.5
SMPD1-205ENST00000531303 LSM1O15116 133 aaKnown RBP18.16■□□□□ 0.5
SMPD1-205ENST00000531303 KLHL41O60662 606 aa18.16■□□□□ 0.5
SMPD1-205ENST00000531303 SLC35G6P0C7Q6 338 aa18.16■□□□□ 0.5
SMPD1-205ENST00000531303 HSD3B1P14060 373 aa18.16■□□□□ 0.5
SMPD1-205ENST00000531303 HSD3B2P26439 372 aa18.16■□□□□ 0.5
SMPD1-205ENST00000531303 GABRA4P48169 554 aa18.16■□□□□ 0.5
SMPD1-205ENST00000531303 RAP1GDS1P52306 607 aa18.16■□□□□ 0.5
SMPD1-205ENST00000531303 PDX1P52945 283 aa18.16■□□□□ 0.5
SMPD1-205ENST00000531303 ZFP36L1Q07352 338 aaKnown RBP18.16■□□□□ 0.5
SMPD1-205ENST00000531303 C16orf72Q14CZ0 275 aa18.16■□□□□ 0.5
SMPD1-205ENST00000531303 DEPDC1Q5TB30 811 aa18.16■□□□□ 0.5
SMPD1-205ENST00000531303 KHDRBS2Q5VWX1 349 aaKnown RBP18.16■□□□□ 0.5
SMPD1-205ENST00000531303 RNF165Q6ZSG1 346 aa18.16■□□□□ 0.5
SMPD1-205ENST00000531303 CHSY3Q70JA7 882 aa18.16■□□□□ 0.5
SMPD1-205ENST00000531303 ZCCHC10Q8TBK6 192 aa18.16■□□□□ 0.5
SMPD1-205ENST00000531303 ACTRT2Q8TDY3 377 aa18.16■□□□□ 0.5
SMPD1-205ENST00000531303 TM4SF19Q96DZ7 209 aa18.16■□□□□ 0.5
SMPD1-205ENST00000531303 MAELQ96JY0 434 aaKnown RBP18.16■□□□□ 0.5
SMPD1-205ENST00000531303 MARK4Q96L34 752 aa18.16■□□□□ 0.5
SMPD1-205ENST00000531303 TMEM74Q96NL1 305 aa18.16■□□□□ 0.5
SMPD1-205ENST00000531303 C1orf50Q9BV19 199 aa18.16■□□□□ 0.5
SMPD1-205ENST00000531303 SORBS1Q9BX66 1292 aaKnown RBP18.16■□□□□ 0.5
SMPD1-205ENST00000531303 AICDAQ9GZX7 198 aa18.16■□□□□ 0.5
SMPD1-205ENST00000531303 CHRNA10Q9GZZ6 450 aa18.16■□□□□ 0.5
SMPD1-205ENST00000531303 SPRTNQ9H040 489 aaPredicted RBP18.16■□□□□ 0.5
SMPD1-205ENST00000531303 NMRK1Q9NWW6 199 aa18.16■□□□□ 0.5
SMPD1-205ENST00000531303 C1orf109Q9NX04 203 aa18.16■□□□□ 0.5
SMPD1-205ENST00000531303 CDV3Q9UKY7 258 aaKnown RBP18.16■□□□□ 0.5
SMPD1-205ENST00000531303 COL27A1Q8IZC6 1860 aaPredicted RBP18.16■□□□□ 0.5
SMPD1-205ENST00000531303 LRIT2A6NDA9 550 aa18.15■□□□□ 0.5
SMPD1-205ENST00000531303 TM4SF5O14894 197 aa18.15■□□□□ 0.5
SMPD1-205ENST00000531303 VPS4BO75351 444 aa18.15■□□□□ 0.5
SMPD1-205ENST00000531303 SERPINA6P08185 405 aa18.15■□□□□ 0.5
SMPD1-205ENST00000531303 FTH1P19P0C7X4 201 aa18.15■□□□□ 0.5
SMPD1-205ENST00000531303 CSRP1P21291 193 aaKnown RBP18.15■□□□□ 0.5
SMPD1-205ENST00000531303 GSTM2P28161 218 aa18.15■□□□□ 0.5
SMPD1-205ENST00000531303 CSTF2P33240 577 aaKnown RBP eCLIP18.15■□□□□ 0.5
SMPD1-205ENST00000531303 NOVA1P51513 510 aaKnown RBP18.15■□□□□ 0.5
SMPD1-205ENST00000531303 PLA2G16P53816 162 aa18.15■□□□□ 0.5
SMPD1-205ENST00000531303 RAB8AP61006 207 aa18.15■□□□□ 0.5
SMPD1-205ENST00000531303 RPL38P63173 70 aaKnown RBP18.15■□□□□ 0.5
SMPD1-205ENST00000531303 FOXM1Q08050 763 aa18.15■□□□□ 0.5
SMPD1-205ENST00000531303 HYAL2Q12891 473 aa18.15■□□□□ 0.5
SMPD1-205ENST00000531303 PWP1Q13610 501 aa18.15■□□□□ 0.5
SMPD1-205ENST00000531303 TMEM198Q66K66 360 aa18.15■□□□□ 0.5
SMPD1-205ENST00000531303 LARP4Q71RC2 724 aaKnown RBP eCLIP18.15■□□□□ 0.5
SMPD1-205ENST00000531303 ALYREFQ86V81 257 aaKnown RBP18.15■□□□□ 0.5
SMPD1-205ENST00000531303 CEP70Q8NHQ1 597 aa18.15■□□□□ 0.5
SMPD1-205ENST00000531303 RNF31Q96EP0 1072 aa18.15■□□□□ 0.5
SMPD1-205ENST00000531303 SEC16BQ96JE7 1060 aa18.15■□□□□ 0.5
SMPD1-205ENST00000531303 PPP3R2Q96LZ3 170 aa18.15■□□□□ 0.5
SMPD1-205ENST00000531303 NLNQ9BYT8 704 aa18.15■□□□□ 0.5
SMPD1-205ENST00000531303 REXO4Q9GZR2 422 aaKnown RBP18.15■□□□□ 0.5
SMPD1-205ENST00000531303 FGF21Q9NSA1 209 aa18.15■□□□□ 0.5
SMPD1-205ENST00000531303 RTCAO00442 366 aaKnown RBP18.14■□□□□ 0.5
SMPD1-205ENST00000531303 SLC30A4O14863 429 aa18.14■□□□□ 0.5
SMPD1-205ENST00000531303 SRPX2O60687 465 aaPredicted RBP18.14■□□□□ 0.5
SMPD1-205ENST00000531303 RSL1D1O76021 490 aaKnown RBP18.14■□□□□ 0.5
SMPD1-205ENST00000531303 B3GALT4O96024 378 aa18.14■□□□□ 0.5
SMPD1-205ENST00000531303 MT-CO3P00414 261 aa18.14■□□□□ 0.5
SMPD1-205ENST00000531303 LBPP18428 481 aa18.14■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms