RNA–Protein interactions for RNA: ENST00000529332.5

TM9SF1-208, Transcript of transmembrane 9 superfamily member 1, humanhuman

TSL 5

Gene TM9SF1, Length 2,107 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF1-208ENST00000529332 PRRT4C9JH25 899 aa15.2■□□□□ 0.02
TM9SF1-208ENST00000529332 TOR1BO14657 336 aa15.2■□□□□ 0.02
TM9SF1-208ENST00000529332 SLC16A5O15375 505 aa15.2■□□□□ 0.02
TM9SF1-208ENST00000529332 SGTAO43765 313 aa15.2■□□□□ 0.02
TM9SF1-208ENST00000529332 CPSF4O95639 269 aaKnown RBP15.2■□□□□ 0.02
TM9SF1-208ENST00000529332 COX7A2P14406 83 aa15.2■□□□□ 0.02
TM9SF1-208ENST00000529332 CYP2A7P20853 494 aa15.2■□□□□ 0.02
TM9SF1-208ENST00000529332 OPRD1P41143 372 aa15.2■□□□□ 0.02
TM9SF1-208ENST00000529332 SRSF11Q05519 484 aaKnown RBP15.2■□□□□ 0.02
TM9SF1-208ENST00000529332 SP140Q13342 867 aa15.2■□□□□ 0.02
TM9SF1-208ENST00000529332 HTR4Q13639 388 aa15.2■□□□□ 0.02
TM9SF1-208ENST00000529332 RGS21Q2M5E4 152 aa15.2■□□□□ 0.02
TM9SF1-208ENST00000529332 PLEKHS1Q5SXH7 462 aa15.2■□□□□ 0.02
TM9SF1-208ENST00000529332 CBLL1Q75N03 491 aa15.2■□□□□ 0.02
TM9SF1-208ENST00000529332 CCDC71Q8IV32 467 aaPredicted RBP15.2■□□□□ 0.02
TM9SF1-208ENST00000529332 TMCO5AQ8N6Q1 288 aa15.2■□□□□ 0.02
TM9SF1-208ENST00000529332 TTC29Q8NA56 475 aaPredicted RBP15.2■□□□□ 0.02
TM9SF1-208ENST00000529332 CHST14Q8NCH0 376 aa15.2■□□□□ 0.02
TM9SF1-208ENST00000529332 NDNFQ8TB73 568 aa15.2■□□□□ 0.02
TM9SF1-208ENST00000529332 YIPF6Q96EC8 236 aa15.2■□□□□ 0.02
TM9SF1-208ENST00000529332 MTERF1Q99551 399 aaKnown RBP15.2■□□□□ 0.02
TM9SF1-208ENST00000529332 SIRT5Q9NXA8 310 aa15.2■□□□□ 0.02
TM9SF1-208ENST00000529332 IL36AQ9UHA7 158 aa15.2■□□□□ 0.02
TM9SF1-208ENST00000529332 RPS6KA6Q9UK32 745 aa15.2■□□□□ 0.02
TM9SF1-208ENST00000529332 HSPE1-MOB4S4R3N1 261 aa15.2■□□□□ 0.02
TM9SF1-208ENST00000529332 PABPN1LA6NDY0 278 aaKnown RBP15.19■□□□□ 0.02
TM9SF1-208ENST00000529332 JRKO75564 520 aa15.19■□□□□ 0.02
TM9SF1-208ENST00000529332 MT-ND2P03891 347 aa15.19■□□□□ 0.02
TM9SF1-208ENST00000529332 LAMP1P11279 417 aa15.19■□□□□ 0.02
TM9SF1-208ENST00000529332 ALDH4A1P30038 563 aa15.19■□□□□ 0.02
TM9SF1-208ENST00000529332 CD97P48960 835 aa15.19■□□□□ 0.02
TM9SF1-208ENST00000529332 ARHGDIAP52565 204 aa15.19■□□□□ 0.02
TM9SF1-208ENST00000529332 AP1S2P56377 157 aa15.19■□□□□ 0.02
TM9SF1-208ENST00000529332 IRF8Q02556 426 aa15.19■□□□□ 0.02
TM9SF1-208ENST00000529332 EIF3MQ7L2H7 374 aaKnown RBP15.19■□□□□ 0.02
TM9SF1-208ENST00000529332 HORMAD1Q86X24 394 aa15.19■□□□□ 0.02
TM9SF1-208ENST00000529332 RASGRP3Q8IV61 690 aa15.19■□□□□ 0.02
TM9SF1-208ENST00000529332 OR8J2Q8NGG1 315 aa15.19■□□□□ 0.02
TM9SF1-208ENST00000529332 CDC26Q8NHZ8 85 aa15.19■□□□□ 0.02
TM9SF1-208ENST00000529332 WDR20Q8TBZ3 569 aa15.19■□□□□ 0.02
TM9SF1-208ENST00000529332 SCAMP4Q969E2 229 aa15.19■□□□□ 0.02
TM9SF1-208ENST00000529332 UBE2FQ969M7 185 aa15.19■□□□□ 0.02
TM9SF1-208ENST00000529332 ALOXE3Q9BYJ1 711 aa15.19■□□□□ 0.02
TM9SF1-208ENST00000529332 AKIP1Q9NQ31 210 aa15.19■□□□□ 0.02
TM9SF1-208ENST00000529332 VPS29Q9UBQ0 182 aa15.19■□□□□ 0.02
TM9SF1-208ENST00000529332 SH3GLB1Q9Y371 365 aa15.19■□□□□ 0.02
TM9SF1-208ENST00000529332 TPRKBQ9Y3C4 175 aa15.19■□□□□ 0.02
TM9SF1-208ENST00000529332 SAMHD1Q9Y3Z3 626 aaKnown RBP15.19■□□□□ 0.02
TM9SF1-208ENST00000529332 TICRRQ7Z2Z1 1910 aa15.19■□□□□ 0.02
TM9SF1-208ENST00000529332 EDDM13A0A1B0GTR0 161 aa15.19■□□□□ 0.02
TM9SF1-208ENST00000529332 CLDN25C9JDP6 229 aa15.19■□□□□ 0.02
TM9SF1-208ENST00000529332 ANHXE9PGG2 379 aa15.19■□□□□ 0.02
TM9SF1-208ENST00000529332 ZSCAN9O15535 394 aaPredicted RBP15.19■□□□□ 0.02
TM9SF1-208ENST00000529332 APODP05090 189 aa15.19■□□□□ 0.02
TM9SF1-208ENST00000529332 NUDT7P0C024 238 aa15.19■□□□□ 0.02
TM9SF1-208ENST00000529332 BCAP31P51572 246 aa15.19■□□□□ 0.02
TM9SF1-208ENST00000529332 CRYBA2P53672 197 aa15.19■□□□□ 0.02
TM9SF1-208ENST00000529332 CXCR4P61073 352 aa15.19■□□□□ 0.02
TM9SF1-208ENST00000529332 LSM3P62310 102 aaKnown RBP15.19■□□□□ 0.02
TM9SF1-208ENST00000529332 MLLT1Q03111 559 aaPredicted RBP15.19■□□□□ 0.02
TM9SF1-208ENST00000529332 RELAQ04206 551 aa15.19■□□□□ 0.02
TM9SF1-208ENST00000529332 ABRQ12979 859 aa15.19■□□□□ 0.02
TM9SF1-208ENST00000529332 DDX39BQ13838 428 aaKnown RBP15.19■□□□□ 0.02
TM9SF1-208ENST00000529332 MAD2L1BPQ15013 274 aaPredicted RBP15.19■□□□□ 0.02
TM9SF1-208ENST00000529332 IQCCQ4KMZ1 466 aa15.19■□□□□ 0.02
TM9SF1-208ENST00000529332 EGFLAMQ63HQ2 1017 aa15.19■□□□□ 0.02
TM9SF1-208ENST00000529332 SLCO6A1Q86UG4 719 aa15.19■□□□□ 0.02
TM9SF1-208ENST00000529332 ELMO1Q92556 727 aa15.19■□□□□ 0.02
TM9SF1-208ENST00000529332 ARMC7Q9H6L4 198 aa15.19■□□□□ 0.02
TM9SF1-208ENST00000529332 PCDH12Q9NPG4 1184 aa15.19■□□□□ 0.02
TM9SF1-208ENST00000529332 SPATA6Q9NWH7 488 aaPredicted RBP15.19■□□□□ 0.02
TM9SF1-208ENST00000529332 FAM8A1Q9UBU6 413 aa15.19■□□□□ 0.02
TM9SF1-208ENST00000529332 TMEM202A6NGA9 273 aa15.18■□□□□ 0.02
TM9SF1-208ENST00000529332 E7EQ34 232 aa15.18■□□□□ 0.02
TM9SF1-208ENST00000529332 PRMT3O60678 531 aa15.18■□□□□ 0.02
TM9SF1-208ENST00000529332 KAT7O95251 611 aa15.18■□□□□ 0.02
TM9SF1-208ENST00000529332 FKBP9O95302 570 aa15.18■□□□□ 0.02
TM9SF1-208ENST00000529332 PCSK2P16519 638 aa15.18■□□□□ 0.02
TM9SF1-208ENST00000529332 CSTF3Q12996 717 aaKnown RBP15.18■□□□□ 0.02
TM9SF1-208ENST00000529332 CYP2A13Q16696 494 aa15.18■□□□□ 0.02
TM9SF1-208ENST00000529332 HNRNPA1L2Q32P51 320 aaKnown RBP15.18■□□□□ 0.02
TM9SF1-208ENST00000529332 XKR6Q5GH73 641 aa15.18■□□□□ 0.02
TM9SF1-208ENST00000529332 EEF1AKMT2Q5JPI9 291 aaKnown RBP15.18■□□□□ 0.02
TM9SF1-208ENST00000529332 ZNF648Q5T619 568 aaPredicted RBP15.18■□□□□ 0.02
TM9SF1-208ENST00000529332 SYT6Q5T7P8 510 aaPredicted RBP15.18■□□□□ 0.02
TM9SF1-208ENST00000529332 LIPJQ5W064 366 aa15.18■□□□□ 0.02
TM9SF1-208ENST00000529332 ADNP2Q6IQ32 1131 aa15.18■□□□□ 0.02
TM9SF1-208ENST00000529332 ERICH5Q6P6B1 374 aa15.18■□□□□ 0.02
TM9SF1-208ENST00000529332 CCDC81Q6ZN84 652 aa15.18■□□□□ 0.02
TM9SF1-208ENST00000529332 SYNPOQ8N3V7 929 aa15.18■□□□□ 0.02
TM9SF1-208ENST00000529332 HCAR2Q8TDS4 363 aa15.18■□□□□ 0.02
TM9SF1-208ENST00000529332 ZFP90Q8TF47 636 aa15.18■□□□□ 0.02
TM9SF1-208ENST00000529332 FOXJ1Q92949 421 aa15.18■□□□□ 0.02
TM9SF1-208ENST00000529332 SH3KBP1Q96B97 665 aa15.18■□□□□ 0.02
TM9SF1-208ENST00000529332 C11orf24Q96F05 449 aaPredicted RBP15.18■□□□□ 0.02
TM9SF1-208ENST00000529332 FAM120CQ9NX05 1096 aaKnown RBP15.18■□□□□ 0.02
TM9SF1-208ENST00000529332 VPS4AQ9UN37 437 aa15.18■□□□□ 0.02
TM9SF1-208ENST00000529332 ARHGEF33A8MVX0 844 aa15.17■□□□□ 0.02
TM9SF1-208ENST00000529332 H3BQ06 376 aaPredicted RBP15.17■□□□□ 0.02
TM9SF1-208ENST00000529332 LEFTY1O75610 366 aa15.17■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms