RNA–Protein interactions for RNA: ENST00000528516.5

LTBP3-210, Transcript of latent transforming growth factor beta binding protein 3, humanhuman

TSL 1 (best)

Gene LTBP3, Length 3,935 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP3-210ENST00000528516 HMX3A6NHT5 357 aa17.3■□□□□ 0.36
LTBP3-210ENST00000528516 HAS3O00219 553 aa17.3■□□□□ 0.36
LTBP3-210ENST00000528516 MANFP55145 182 aaKnown RBP17.3■□□□□ 0.36
LTBP3-210ENST00000528516 POU6F2P78424 691 aaPredicted RBP17.3■□□□□ 0.36
LTBP3-210ENST00000528516 CREMQ03060 361 aa17.3■□□□□ 0.36
LTBP3-210ENST00000528516 SCN1BQ07699 218 aa17.3■□□□□ 0.36
LTBP3-210ENST00000528516 SMARCB1Q12824 385 aa17.3■□□□□ 0.36
LTBP3-210ENST00000528516 HSPB3Q12988 150 aa17.3■□□□□ 0.36
LTBP3-210ENST00000528516 RNASE12Q5GAN4 147 aaKnown RBP17.3■□□□□ 0.36
LTBP3-210ENST00000528516 PRSS36Q5K4E3 855 aa17.3■□□□□ 0.36
LTBP3-210ENST00000528516 LDLRAD1Q5T700 205 aa17.3■□□□□ 0.36
LTBP3-210ENST00000528516 PLET1Q6UQ28 207 aa17.3■□□□□ 0.36
LTBP3-210ENST00000528516 SUSD1Q6UWL2 747 aa17.3■□□□□ 0.36
LTBP3-210ENST00000528516 Q6ZVL8 140 aa17.3■□□□□ 0.36
LTBP3-210ENST00000528516 BARD1Q99728 777 aaKnown RBP17.3■□□□□ 0.36
LTBP3-210ENST00000528516 TM9SF3Q9HD45 589 aa17.3■□□□□ 0.36
LTBP3-210ENST00000528516 SNTG1Q9NSN8 517 aa17.3■□□□□ 0.36
LTBP3-210ENST00000528516 QPCTLQ9NXS2 382 aa17.3■□□□□ 0.36
LTBP3-210ENST00000528516 NINQ8N4C6 2090 aa17.3■□□□□ 0.36
LTBP3-210ENST00000528516 OR2A25A4D2G3 310 aa17.29■□□□□ 0.36
LTBP3-210ENST00000528516 OR2B3O76000 313 aa17.29■□□□□ 0.36
LTBP3-210ENST00000528516 RGRP47804 291 aa17.29■□□□□ 0.36
LTBP3-210ENST00000528516 MAD2L1BPQ15013 274 aaPredicted RBP17.29■□□□□ 0.36
LTBP3-210ENST00000528516 USP39Q53GS9 565 aaKnown RBP17.29■□□□□ 0.36
LTBP3-210ENST00000528516 PAMR1Q6UXH9 720 aa17.29■□□□□ 0.36
LTBP3-210ENST00000528516 PHYKPLQ8IUZ5 450 aa17.29■□□□□ 0.36
LTBP3-210ENST00000528516 ARHGAP12Q8IWW6 846 aa17.29■□□□□ 0.36
LTBP3-210ENST00000528516 FCGR1BQ92637 280 aa17.29■□□□□ 0.36
LTBP3-210ENST00000528516 KIAA1191Q96A73 305 aa17.29■□□□□ 0.36
LTBP3-210ENST00000528516 TMEM106CQ9BVX2 250 aa17.29■□□□□ 0.36
LTBP3-210ENST00000528516 RPP38P78345 283 aaKnown RBP17.29■□□□□ 0.36
LTBP3-210ENST00000528516 BNC1Q01954 994 aa17.29■□□□□ 0.36
LTBP3-210ENST00000528516 PJA1Q8NG27 643 aa17.29■□□□□ 0.36
LTBP3-210ENST00000528516 ASZ1Q8WWH4 475 aa17.29■□□□□ 0.36
LTBP3-210ENST00000528516 TMEM203Q969S6 136 aa17.29■□□□□ 0.36
LTBP3-210ENST00000528516 FKBP14Q9NWM8 211 aa17.29■□□□□ 0.36
LTBP3-210ENST00000528516 KCTD5Q9NXV2 234 aa17.29■□□□□ 0.36
LTBP3-210ENST00000528516 MALT1Q9UDY8 824 aa17.29■□□□□ 0.36
LTBP3-210ENST00000528516 STSP08842 583 aa17.29■□□□□ 0.36
LTBP3-210ENST00000528516 CBLP22681 906 aa17.29■□□□□ 0.36
LTBP3-210ENST00000528516 MAPKAPK2P49137 400 aa17.29■□□□□ 0.36
LTBP3-210ENST00000528516 PTPN5P54829 565 aa17.29■□□□□ 0.36
LTBP3-210ENST00000528516 ABRAXAS2Q15018 415 aa17.29■□□□□ 0.36
LTBP3-210ENST00000528516 NCF4Q15080 339 aa17.29■□□□□ 0.36
LTBP3-210ENST00000528516 RFTN2Q52LD8 501 aaPredicted RBP17.29■□□□□ 0.36
LTBP3-210ENST00000528516 TMEM220Q6QAJ8 160 aa17.29■□□□□ 0.36
LTBP3-210ENST00000528516 EIF3MQ7L2H7 374 aaKnown RBP17.29■□□□□ 0.36
LTBP3-210ENST00000528516 CLP1Q92989 425 aaKnown RBP17.29■□□□□ 0.36
LTBP3-210ENST00000528516 PPCDCQ96CD2 204 aa17.29■□□□□ 0.36
LTBP3-210ENST00000528516 NLNQ9BYT8 704 aa17.29■□□□□ 0.36
LTBP3-210ENST00000528516 NARFLQ9H6Q4 476 aa17.29■□□□□ 0.36
LTBP3-210ENST00000528516 ZNF224Q9NZL3 707 aa17.29■□□□□ 0.36
LTBP3-210ENST00000528516 GJD2Q9UKL4 321 aa17.29■□□□□ 0.36
LTBP3-210ENST00000528516 POLR1CO15160 346 aaPredicted RBP17.28■□□□□ 0.36
LTBP3-210ENST00000528516 ITGA2P17301 1181 aa17.28■□□□□ 0.36
LTBP3-210ENST00000528516 ZBTB6Q15916 424 aa17.28■□□□□ 0.36
LTBP3-210ENST00000528516 PYDC2Q56P42 97 aa17.28■□□□□ 0.36
LTBP3-210ENST00000528516 KIAA1614Q5VZ46 1190 aa17.28■□□□□ 0.36
LTBP3-210ENST00000528516 PTCHD4Q6ZW05 846 aa17.28■□□□□ 0.36
LTBP3-210ENST00000528516 UXS1Q8NBZ7 420 aa17.28■□□□□ 0.36
LTBP3-210ENST00000528516 FRMD6Q96NE9 622 aa17.28■□□□□ 0.36
LTBP3-210ENST00000528516 C11orf16Q9NQ32 467 aa17.28■□□□□ 0.36
LTBP3-210ENST00000528516 NPAP1Q9NZP6 1156 aa17.28■□□□□ 0.36
LTBP3-210ENST00000528516 RPS6KA6Q9UK32 745 aa17.28■□□□□ 0.36
LTBP3-210ENST00000528516 CFL2Q9Y281 166 aa17.28■□□□□ 0.36
LTBP3-210ENST00000528516 TPRP12270 2363 aaKnown RBP17.28■□□□□ 0.36
LTBP3-210ENST00000528516 SLC16A6O15403 523 aa17.28■□□□□ 0.36
LTBP3-210ENST00000528516 PRSS23O95084 383 aa17.28■□□□□ 0.36
LTBP3-210ENST00000528516 FHP07954 510 aa17.28■□□□□ 0.36
LTBP3-210ENST00000528516 ALPPL2P10696 532 aa17.28■□□□□ 0.36
LTBP3-210ENST00000528516 OGNP20774 298 aaKnown RBP17.28■□□□□ 0.36
LTBP3-210ENST00000528516 NOS3P29474 1203 aa17.28■□□□□ 0.36
LTBP3-210ENST00000528516 UGT2B15P54855 530 aa17.28■□□□□ 0.36
LTBP3-210ENST00000528516 RAB25P57735 213 aa17.28■□□□□ 0.36
LTBP3-210ENST00000528516 C1DQ13901 141 aaKnown RBP17.28■□□□□ 0.36
LTBP3-210ENST00000528516 ZNF57Q68EA5 555 aaPredicted RBP17.28■□□□□ 0.36
LTBP3-210ENST00000528516 Q6ZPB1 254 aaPredicted RBP17.28■□□□□ 0.36
LTBP3-210ENST00000528516 OR8H3Q8N146 312 aa17.28■□□□□ 0.36
LTBP3-210ENST00000528516 OR2T11Q8NH01 316 aa17.28■□□□□ 0.36
LTBP3-210ENST00000528516 NETO1Q8TDF5 533 aa17.28■□□□□ 0.36
LTBP3-210ENST00000528516 SLC22A4Q9H015 551 aa17.28■□□□□ 0.36
LTBP3-210ENST00000528516 PHIPQ8WWQ0 1821 aa17.28■□□□□ 0.36
LTBP3-210ENST00000528516 LCHNA4D1U4 455 aa17.28■□□□□ 0.36
LTBP3-210ENST00000528516 CLIC1O00299 241 aa17.28■□□□□ 0.36
LTBP3-210ENST00000528516 CDK2AP1O14519 115 aa17.28■□□□□ 0.36
LTBP3-210ENST00000528516 MYL12BO14950 172 aa17.28■□□□□ 0.36
LTBP3-210ENST00000528516 COCHO43405 550 aa17.28■□□□□ 0.36
LTBP3-210ENST00000528516 APOL3O95236 402 aa17.28■□□□□ 0.36
LTBP3-210ENST00000528516 PPP2R1BP30154 601 aa17.28■□□□□ 0.36
LTBP3-210ENST00000528516 CD6P30203 668 aa17.28■□□□□ 0.36
LTBP3-210ENST00000528516 TNFSF8P32971 234 aa17.28■□□□□ 0.36
LTBP3-210ENST00000528516 TSTQ16762 297 aaKnown RBP17.28■□□□□ 0.36
LTBP3-210ENST00000528516 OR2T5Q6IEZ7 315 aa17.28■□□□□ 0.36
LTBP3-210ENST00000528516 CERS6Q6ZMG9 384 aa17.28■□□□□ 0.36
LTBP3-210ENST00000528516 RNF175Q8N4F7 328 aa17.28■□□□□ 0.36
LTBP3-210ENST00000528516 LSMEM1Q8N8F7 131 aa17.28■□□□□ 0.36
LTBP3-210ENST00000528516 OR2T29Q8NH02 315 aa17.28■□□□□ 0.36
LTBP3-210ENST00000528516 PCDHGB1Q9Y5G3 927 aa17.28■□□□□ 0.36
LTBP3-210ENST00000528516 PRAMEF11O60813 436 aa17.28■□□□□ 0.36
LTBP3-210ENST00000528516 TSPAN19P0C672 248 aa17.28■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms