RNA–Protein interactions for RNA: ENST00000523966.5

SKP1-212, Transcript of S-phase kinase associated protein 1, humanhuman

TSL 3

Gene SKP1, Length 899 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-212ENST00000523966 ERICH3Q5RHP9 1530 aa3.44□□□□□ -1.86
SKP1-212ENST00000523966 ABCA10Q8WWZ4 1543 aa3.44□□□□□ -1.86
SKP1-212ENST00000523966 KIF21BO75037 1637 aa3.44□□□□□ -1.86
SKP1-212ENST00000523966 GREB1LQ9C091 1923 aaPredicted RBP3.44□□□□□ -1.86
SKP1-212ENST00000523966 SCN5AQ14524 2016 aa3.44□□□□□ -1.86
SKP1-212ENST00000523966 MEIOCA2RUB1 952 aa3.44□□□□□ -1.86
SKP1-212ENST00000523966 FAM149AA5PLN7 773 aa3.44□□□□□ -1.86
SKP1-212ENST00000523966 TCP10L2B9ZVM9 353 aa3.44□□□□□ -1.86
SKP1-212ENST00000523966 ZNF195O14628 629 aa3.44□□□□□ -1.86
SKP1-212ENST00000523966 EDIL3O43854 480 aa3.44□□□□□ -1.86
SKP1-212ENST00000523966 KIF5CO60282 957 aa3.44□□□□□ -1.86
SKP1-212ENST00000523966 CYTIPO60759 359 aa3.44□□□□□ -1.86
SKP1-212ENST00000523966 FMO6PO60774 539 aa3.44□□□□□ -1.86
SKP1-212ENST00000523966 ATP9AO75110 1047 aa3.44□□□□□ -1.86
SKP1-212ENST00000523966 SLC16A8O95907 504 aa3.44□□□□□ -1.86
SKP1-212ENST00000523966 CPA3P15088 417 aa3.44□□□□□ -1.86
SKP1-212ENST00000523966 ATP6V1B1P15313 513 aa3.44□□□□□ -1.86
SKP1-212ENST00000523966 RBMS1P29558 406 aaKnown RBP3.44□□□□□ -1.86
SKP1-212ENST00000523966 OAS2P29728 719 aaKnown RBP3.44□□□□□ -1.86
SKP1-212ENST00000523966 HLA-FP30511 346 aa3.44□□□□□ -1.86
SKP1-212ENST00000523966 NR0B1P51843 470 aaKnown RBP3.44□□□□□ -1.86
SKP1-212ENST00000523966 GNB1P62873 340 aa3.44□□□□□ -1.86
SKP1-212ENST00000523966 PMP22Q01453 160 aa3.44□□□□□ -1.86
SKP1-212ENST00000523966 SLC34A1Q06495 639 aa3.44□□□□□ -1.86
SKP1-212ENST00000523966 CDH18Q13634 790 aa3.44□□□□□ -1.86
SKP1-212ENST00000523966 ACKR1Q16570 336 aa3.44□□□□□ -1.86
SKP1-212ENST00000523966 ZFP69Q49AA0 526 aa3.44□□□□□ -1.86
SKP1-212ENST00000523966 Q6ZSR9 355 aa3.44□□□□□ -1.86
SKP1-212ENST00000523966 RAPH1Q70E73 1250 aa3.44□□□□□ -1.86
SKP1-212ENST00000523966 BTN2A1Q7KYR7 527 aa3.44□□□□□ -1.86
SKP1-212ENST00000523966 KCTD9Q7L273 389 aa3.44□□□□□ -1.86
SKP1-212ENST00000523966 BHLHA9Q7RTU4 235 aa3.44□□□□□ -1.86
SKP1-212ENST00000523966 CPEB2Q7Z5Q1 589 aaKnown RBP3.44□□□□□ -1.86
SKP1-212ENST00000523966 ZNF329Q86UD4 541 aa3.44□□□□□ -1.86
SKP1-212ENST00000523966 SNX32Q86XE0 403 aa3.44□□□□□ -1.86
SKP1-212ENST00000523966 CCDC185Q8N715 623 aa3.44□□□□□ -1.86
SKP1-212ENST00000523966 NXPE2Q96DL1 559 aa3.44□□□□□ -1.86
SKP1-212ENST00000523966 RBM4Q9BWF3 364 aaKnown RBP3.44□□□□□ -1.86
SKP1-212ENST00000523966 TDRD1Q9BXT4 1180 aaKnown RBP3.44□□□□□ -1.86
SKP1-212ENST00000523966 SLC5A7Q9GZV3 580 aa3.44□□□□□ -1.86
SKP1-212ENST00000523966 ZNF350Q9GZX5 532 aa3.44□□□□□ -1.86
SKP1-212ENST00000523966 NAPBQ9H115 298 aa3.44□□□□□ -1.86
SKP1-212ENST00000523966 EGLN3Q9H6Z9 239 aa3.44□□□□□ -1.86
SKP1-212ENST00000523966 ZNF696Q9H7X3 374 aa3.44□□□□□ -1.86
SKP1-212ENST00000523966 AKIRIN1Q9H9L7 192 aaPredicted RBP3.44□□□□□ -1.86
SKP1-212ENST00000523966 GPR173Q9NS66 373 aa3.44□□□□□ -1.86
SKP1-212ENST00000523966 MTRRQ9UBK8 725 aa3.44□□□□□ -1.86
SKP1-212ENST00000523966 FBXL4Q9UKA2 621 aa3.44□□□□□ -1.86
SKP1-212ENST00000523966 GPR132Q9UNW8 380 aa3.44□□□□□ -1.86
SKP1-212ENST00000523966 KLK4Q9Y5K2 254 aa3.44□□□□□ -1.86
SKP1-212ENST00000523966 URB2Q14146 1524 aaKnown RBP3.44□□□□□ -1.86
SKP1-212ENST00000523966 PFASO15067 1338 aa3.44□□□□□ -1.86
SKP1-212ENST00000523966 RNF123Q5XPI4 1314 aa3.44□□□□□ -1.86
SKP1-212ENST00000523966 RAPGEF2Q9Y4G8 1499 aa3.43□□□□□ -1.86
SKP1-212ENST00000523966 DISP3Q9P2K9 1392 aa3.43□□□□□ -1.86
SKP1-212ENST00000523966 IQCMA0A1B0GVH7 501 aa3.43□□□□□ -1.86
SKP1-212ENST00000523966 KHDRBS3O75525 346 aaKnown RBP3.43□□□□□ -1.86
SKP1-212ENST00000523966 GLCEO94923 617 aa3.43□□□□□ -1.86
SKP1-212ENST00000523966 RNF224P0DH78 156 aa3.43□□□□□ -1.86
SKP1-212ENST00000523966 DLATP10515 647 aaKnown RBP3.43□□□□□ -1.86
SKP1-212ENST00000523966 CTNNA2P26232 953 aa3.43□□□□□ -1.86
SKP1-212ENST00000523966 SLC1A3P43003 542 aa3.43□□□□□ -1.86
SKP1-212ENST00000523966 SLC6A12P48065 614 aa3.43□□□□□ -1.86
SKP1-212ENST00000523966 LEPRP48357 1165 aaKnown RBP3.43□□□□□ -1.86
SKP1-212ENST00000523966 XGP55808 180 aa3.43□□□□□ -1.86
SKP1-212ENST00000523966 RPP38P78345 283 aaKnown RBP3.43□□□□□ -1.86
SKP1-212ENST00000523966 ARHGAP1Q07960 439 aa3.43□□□□□ -1.86
SKP1-212ENST00000523966 EFTUD2Q15029 972 aaKnown RBP eCLIP3.43□□□□□ -1.867e-8■■■□□ 18.5
SKP1-212ENST00000523966 MTHFSDQ2M296 383 aaKnown RBP3.43□□□□□ -1.86
SKP1-212ENST00000523966 BSPRYQ5W0U4 402 aa3.43□□□□□ -1.86
SKP1-212ENST00000523966 ARHGAP17Q68EM7 881 aa3.43□□□□□ -1.86
SKP1-212ENST00000523966 PM20D1Q6GTS8 502 aa3.43□□□□□ -1.86
SKP1-212ENST00000523966 PODNL1Q6PEZ8 512 aa3.43□□□□□ -1.86
SKP1-212ENST00000523966 BHLHB9Q6PI77 547 aa3.43□□□□□ -1.86
SKP1-212ENST00000523966 DHRS11Q6UWP2 260 aa3.43□□□□□ -1.86
SKP1-212ENST00000523966 LEKR1Q6ZMV7 388 aa3.43□□□□□ -1.86
SKP1-212ENST00000523966 Q6ZTC4 211 aa3.43□□□□□ -1.86
SKP1-212ENST00000523966 C15orf52Q6ZUT6 534 aaKnown RBP3.43□□□□□ -1.86
SKP1-212ENST00000523966 COX8CQ7Z4L0 72 aa3.43□□□□□ -1.86
SKP1-212ENST00000523966 SIAH3Q8IW03 269 aa3.43□□□□□ -1.86
SKP1-212ENST00000523966 ZNF444Q8N0Y2 327 aaPredicted RBP3.43□□□□□ -1.86
SKP1-212ENST00000523966 ADAD2Q8NCV1 583 aaKnown RBP3.43□□□□□ -1.86
SKP1-212ENST00000523966 OR2T6Q8NHC8 308 aa3.43□□□□□ -1.86
SKP1-212ENST00000523966 CHURC1Q8WUH1 139 aa3.43□□□□□ -1.86
SKP1-212ENST00000523966 GATAD1Q8WUU5 269 aa3.43□□□□□ -1.86
SKP1-212ENST00000523966 AZIN2Q96A70 460 aa3.43□□□□□ -1.86
SKP1-212ENST00000523966 AP2M1Q96CW1 435 aa3.43□□□□□ -1.86
SKP1-212ENST00000523966 CFAP36Q96G28 342 aa3.43□□□□□ -1.86
SKP1-212ENST00000523966 SCRT2Q9NQ03 307 aa3.43□□□□□ -1.86
SKP1-212ENST00000523966 PLCXD1Q9NUJ7 323 aa3.43□□□□□ -1.86
SKP1-212ENST00000523966 RNF186Q9NXI6 227 aa3.43□□□□□ -1.86
SKP1-212ENST00000523966 PILRBQ9UKJ0 227 aa3.43□□□□□ -1.86
SKP1-212ENST00000523966 POMT2Q9UKY4 750 aa3.43□□□□□ -1.86
SKP1-212ENST00000523966 STX8Q9UNK0 236 aa3.43□□□□□ -1.86
SKP1-212ENST00000523966 HBS1LQ9Y450 684 aaKnown RBP3.43□□□□□ -1.86
SKP1-212ENST00000523966 CEP162Q5TB80 1403 aa3.43□□□□□ -1.86
SKP1-212ENST00000523966 GAPVD1Q14C86 1478 aa3.42□□□□□ -1.86
SKP1-212ENST00000523966 IFT140Q96RY7 1462 aa3.42□□□□□ -1.86
SKP1-212ENST00000523966 C15orf61A6NNL5 157 aa3.42□□□□□ -1.86
SKP1-212ENST00000523966 H3BMM5 538 aa3.42□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms