RNA–Protein interactions for RNA: ENST00000523549.1

NSMCE2-211, Transcript of NSE2 (MMS21) homolog, SMC5-SMC6 complex SUMO ligase, humanhuman

TSL 3

Gene NSMCE2, Length 549 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE2-211ENST00000523549 FBXO39Q8N4B4 442 aa3.47□□□□□ -1.85
NSMCE2-211ENST00000523549 ITLN2Q8WWU7 325 aaPredicted RBP3.47□□□□□ -1.85
NSMCE2-211ENST00000523549 PIGTQ969N2 578 aa3.47□□□□□ -1.85
NSMCE2-211ENST00000523549 SLC41A2Q96JW4 573 aa3.47□□□□□ -1.85
NSMCE2-211ENST00000523549 FAM110AQ9BQ89 295 aa3.47□□□□□ -1.85
NSMCE2-211ENST00000523549 INTS2Q9H0H0 1204 aaKnown RBP3.47□□□□□ -1.85
NSMCE2-211ENST00000523549 TKTL2Q9H0I9 626 aa3.47□□□□□ -1.85
NSMCE2-211ENST00000523549 VAT1LQ9HCJ6 419 aa3.47□□□□□ -1.85
NSMCE2-211ENST00000523549 CHST11Q9NPF2 352 aa3.47□□□□□ -1.85
NSMCE2-211ENST00000523549 PCDHGB3Q9Y5G1 929 aa3.47□□□□□ -1.85
NSMCE2-211ENST00000523549 U3KQA8 63 aa3.47□□□□□ -1.85
NSMCE2-211ENST00000523549 TENM2Q9NT68 2774 aa3.46□□□□□ -1.85
NSMCE2-211ENST00000523549 CTAGE9A4FU28 777 aa3.46□□□□□ -1.86
NSMCE2-211ENST00000523549 MKRN2OSH3BPM6 223 aa3.46□□□□□ -1.86
NSMCE2-211ENST00000523549 IFNL4K9M1U5 179 aa3.46□□□□□ -1.86
NSMCE2-211ENST00000523549 VILLO15195 856 aa3.46□□□□□ -1.86
NSMCE2-211ENST00000523549 NVLO15381 856 aaKnown RBP3.46□□□□□ -1.86
NSMCE2-211ENST00000523549 YKT6O15498 198 aa3.46□□□□□ -1.86
NSMCE2-211ENST00000523549 PCDH7O60245 1069 aa3.46□□□□□ -1.86
NSMCE2-211ENST00000523549 FTCDO95954 541 aa3.46□□□□□ -1.86
NSMCE2-211ENST00000523549 INHBAP08476 426 aa3.46□□□□□ -1.86
NSMCE2-211ENST00000523549 POLR2MP0CAP2 368 aa3.46□□□□□ -1.86
NSMCE2-211ENST00000523549 CTAGE8P0CG41 777 aa3.46□□□□□ -1.86
NSMCE2-211ENST00000523549 HSD3B1P14060 373 aa3.46□□□□□ -1.86
NSMCE2-211ENST00000523549 NMT1P30419 496 aaKnown RBP3.46□□□□□ -1.86
NSMCE2-211ENST00000523549 KRT9P35527 623 aa3.46□□□□□ -1.86
NSMCE2-211ENST00000523549 PSMC2P35998 433 aaKnown RBP3.46□□□□□ -1.86
NSMCE2-211ENST00000523549 PGM1P36871 562 aa3.46□□□□□ -1.86
NSMCE2-211ENST00000523549 ETV5P41161 510 aa3.46□□□□□ -1.86
NSMCE2-211ENST00000523549 BRCC3P46736 316 aa3.46□□□□□ -1.86
NSMCE2-211ENST00000523549 TDO2P48775 406 aa3.46□□□□□ -1.86
NSMCE2-211ENST00000523549 ARRB1P49407 418 aaPredicted RBP3.46□□□□□ -1.86
NSMCE2-211ENST00000523549 LUMP51884 338 aaPredicted RBP3.46□□□□□ -1.86
NSMCE2-211ENST00000523549 TERF1P54274 439 aa3.46□□□□□ -1.86
NSMCE2-211ENST00000523549 GNB1P62873 340 aa3.46□□□□□ -1.86
NSMCE2-211ENST00000523549 KHDRBS1Q07666 443 aaKnown RBP eCLIP3.46□□□□□ -1.86
NSMCE2-211ENST00000523549 ELAVL2Q12926 359 aaKnown RBP3.46□□□□□ -1.86
NSMCE2-211ENST00000523549 PLD1Q13393 1074 aa3.46□□□□□ -1.86
NSMCE2-211ENST00000523549 DRAP1Q14919 205 aaPredicted RBP3.46□□□□□ -1.86
NSMCE2-211ENST00000523549 ZNF77Q15935 545 aa3.46□□□□□ -1.86
NSMCE2-211ENST00000523549 NFIL3Q16649 462 aa3.46□□□□□ -1.86
NSMCE2-211ENST00000523549 HSP90AB4PQ58FF6 505 aa3.46□□□□□ -1.86
NSMCE2-211ENST00000523549 LCE3AQ5TA76 89 aa3.46□□□□□ -1.86
NSMCE2-211ENST00000523549 ATF7IP2Q5U623 682 aa3.46□□□□□ -1.86
NSMCE2-211ENST00000523549 CEACAM20Q6UY09 585 aa3.46□□□□□ -1.86
NSMCE2-211ENST00000523549 C16orf47Q6ZP98 133 aaPredicted RBP3.46□□□□□ -1.86
NSMCE2-211ENST00000523549 DNAJB7Q7Z6W7 309 aaPredicted RBP3.46□□□□□ -1.86
NSMCE2-211ENST00000523549 CTAGE4Q8IX94 777 aa3.46□□□□□ -1.86
NSMCE2-211ENST00000523549 SMC5Q8IY18 1101 aa3.46□□□□□ -1.86
NSMCE2-211ENST00000523549 EXOC8Q8IYI6 725 aa3.46□□□□□ -1.86
NSMCE2-211ENST00000523549 SRBD1Q8N5C6 995 aaKnown RBP3.46□□□□□ -1.86
NSMCE2-211ENST00000523549 TMEM190Q8WZ59 177 aa3.46□□□□□ -1.86
NSMCE2-211ENST00000523549 BIRC7Q96CA5 298 aa3.46□□□□□ -1.86
NSMCE2-211ENST00000523549 ATOH8Q96SQ7 321 aa3.46□□□□□ -1.86
NSMCE2-211ENST00000523549 C19orf24Q9BVV8 132 aa3.46□□□□□ -1.86
NSMCE2-211ENST00000523549 CXCL16Q9H2A7 254 aa3.46□□□□□ -1.86
NSMCE2-211ENST00000523549 NXF3Q9H4D5 531 aaKnown RBP3.46□□□□□ -1.86
NSMCE2-211ENST00000523549 SYNDIG1Q9H7V2 258 aa3.46□□□□□ -1.86
NSMCE2-211ENST00000523549 KIF9Q9HAQ2 790 aa3.46□□□□□ -1.86
NSMCE2-211ENST00000523549 EPB41L5Q9HCM4 733 aa3.46□□□□□ -1.86
NSMCE2-211ENST00000523549 UBN1Q9NPG3 1134 aa3.46□□□□□ -1.86
NSMCE2-211ENST00000523549 ASF1BQ9NVP2 202 aa3.46□□□□□ -1.86
NSMCE2-211ENST00000523549 ZKSCAN7Q9P0L1 754 aaPredicted RBP3.46□□□□□ -1.86
NSMCE2-211ENST00000523549 ARMCX1Q9P291 453 aa3.46□□□□□ -1.86
NSMCE2-211ENST00000523549 FBXL5Q9UKA1 691 aa3.46□□□□□ -1.86
NSMCE2-211ENST00000523549 HSF4Q9ULV5 492 aa3.46□□□□□ -1.86
NSMCE2-211ENST00000523549 ERVK-11Q9UQG0 969 aa3.46□□□□□ -1.86
NSMCE2-211ENST00000523549 KCNK7Q9Y2U2 307 aa3.46□□□□□ -1.86
NSMCE2-211ENST00000523549 RNF215Q9Y6U7 377 aa3.46□□□□□ -1.86
NSMCE2-211ENST00000523549 NCOA6Q14686 2063 aaPredicted RBP3.46□□□□□ -1.86
NSMCE2-211ENST00000523549 INTS1Q8N201 2190 aaKnown RBP3.46□□□□□ -1.86
NSMCE2-211ENST00000523549 MTMR11A4FU01 709 aa3.45□□□□□ -1.86
NSMCE2-211ENST00000523549 WASH3PC4AMC7 463 aa3.45□□□□□ -1.86
NSMCE2-211ENST00000523549 BLOC1S5-TXNDC5H3BN57 136 aa3.45□□□□□ -1.86
NSMCE2-211ENST00000523549 DDX39AO00148 427 aaKnown RBP3.45□□□□□ -1.86
NSMCE2-211ENST00000523549 IGHV4-39P01824 125 aa3.45□□□□□ -1.86
NSMCE2-211ENST00000523549 GP1BAP07359 652 aa3.45□□□□□ -1.86
NSMCE2-211ENST00000523549 IRF1P10914 325 aa3.45□□□□□ -1.86
NSMCE2-211ENST00000523549 TOP1P11387 765 aaKnown RBP3.45□□□□□ -1.86
NSMCE2-211ENST00000523549 CD27P26842 260 aa3.45□□□□□ -1.86
NSMCE2-211ENST00000523549 TMOD1P28289 359 aa3.45□□□□□ -1.86
NSMCE2-211ENST00000523549 ACSL1P33121 698 aa3.45□□□□□ -1.86
NSMCE2-211ENST00000523549 TNFRSF4P43489 277 aa3.45□□□□□ -1.86
NSMCE2-211ENST00000523549 MAPK9P45984 424 aa3.45□□□□□ -1.86
NSMCE2-211ENST00000523549 GABRB2P47870 512 aa3.45□□□□□ -1.86
NSMCE2-211ENST00000523549 SLC26A2P50443 739 aa3.45□□□□□ -1.86
NSMCE2-211ENST00000523549 CCR5P51681 352 aa3.45□□□□□ -1.86
NSMCE2-211ENST00000523549 DRG2P55039 364 aaKnown RBP3.45□□□□□ -1.86
NSMCE2-211ENST00000523549 SORDQ00796 357 aa3.45□□□□□ -1.86
NSMCE2-211ENST00000523549 NAE1Q13564 534 aa3.45□□□□□ -1.86
NSMCE2-211ENST00000523549 FUT11Q495W5 492 aa3.45□□□□□ -1.86
NSMCE2-211ENST00000523549 TPGS2Q68CL5 300 aa3.45□□□□□ -1.86
NSMCE2-211ENST00000523549 DUS1LQ6P1R4 473 aaKnown RBP3.45□□□□□ -1.86
NSMCE2-211ENST00000523549 SLC27A1Q6PCB7 646 aa3.45□□□□□ -1.86
NSMCE2-211ENST00000523549 PODNL1Q6PEZ8 512 aa3.45□□□□□ -1.86
NSMCE2-211ENST00000523549 BRAT1Q6PJG6 821 aa3.45□□□□□ -1.86
NSMCE2-211ENST00000523549 SLC22A25Q6T423 547 aa3.45□□□□□ -1.86
NSMCE2-211ENST00000523549 SUSD1Q6UWL2 747 aa3.45□□□□□ -1.86
NSMCE2-211ENST00000523549 CD300LGQ6UXG3 332 aa3.45□□□□□ -1.86
NSMCE2-211ENST00000523549 QSOX2Q6ZRP7 698 aa3.45□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms