RNA–Protein interactions for RNA: ENST00000522122.1

SYNPO-205, Transcript of synaptopodin, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SYNPO, Length 5,098 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO-205ENST00000522122 PRAMEF10O60809 474 aa13.38□□□□□ -0.27
SYNPO-205ENST00000522122 IFNA6P05013 189 aa13.38□□□□□ -0.27
SYNPO-205ENST00000522122 ARSDP51689 593 aa13.38□□□□□ -0.27
SYNPO-205ENST00000522122 ERVK-21P61565 698 aa13.38□□□□□ -0.27
SYNPO-205ENST00000522122 CLEC12AQ5QGZ9 265 aa13.38□□□□□ -0.27
SYNPO-205ENST00000522122 IRAK1BP1Q5VVH5 260 aa13.38□□□□□ -0.27
SYNPO-205ENST00000522122 TMIGD1Q6UXZ0 262 aa13.38□□□□□ -0.27
SYNPO-205ENST00000522122 LARP4Q71RC2 724 aaKnown RBP eCLIP13.38□□□□□ -0.27
SYNPO-205ENST00000522122 LINC00471Q8N535 108 aa13.38□□□□□ -0.27
SYNPO-205ENST00000522122 ALPK1Q96QP1 1244 aa13.38□□□□□ -0.27
SYNPO-205ENST00000522122 SRMSQ9H3Y6 488 aa13.38□□□□□ -0.27
SYNPO-205ENST00000522122 DKK3Q9UBP4 350 aa13.38□□□□□ -0.27
SYNPO-205ENST00000522122 FAM25EA8MYX2 175 aa13.38□□□□□ -0.27
SYNPO-205ENST00000522122 UPK3BL1B0FP48 263 aa13.38□□□□□ -0.27
SYNPO-205ENST00000522122 UPK3BL2E5RIL1 263 aa13.38□□□□□ -0.27
SYNPO-205ENST00000522122 CD72P21854 359 aa13.38□□□□□ -0.27
SYNPO-205ENST00000522122 BDKRB1P46663 353 aa13.38□□□□□ -0.27
SYNPO-205ENST00000522122 GJA8P48165 433 aa13.38□□□□□ -0.27
SYNPO-205ENST00000522122 TAS2R50P59544 299 aa13.38□□□□□ -0.27
SYNPO-205ENST00000522122 HSF2Q03933 536 aa13.38□□□□□ -0.27
SYNPO-205ENST00000522122 SP140Q13342 867 aa13.38□□□□□ -0.27
SYNPO-205ENST00000522122 NFATC2Q13469 925 aa13.38□□□□□ -0.27
SYNPO-205ENST00000522122 RANBP10Q6VN20 620 aa13.38□□□□□ -0.27
SYNPO-205ENST00000522122 IQCHQ86VS3 1027 aa13.38□□□□□ -0.27
SYNPO-205ENST00000522122 KLHL36Q8N4N3 616 aa13.38□□□□□ -0.27
SYNPO-205ENST00000522122 GPR151Q8TDV0 419 aa13.38□□□□□ -0.27
SYNPO-205ENST00000522122 C5orf34Q96MH7 638 aa13.38□□□□□ -0.27
SYNPO-205ENST00000522122 SDR39U1Q9NRG7 319 aaPredicted RBP13.38□□□□□ -0.27
SYNPO-205ENST00000522122 NFKBIL1Q9UBC1 381 aaPredicted RBP13.38□□□□□ -0.27
SYNPO-205ENST00000522122 MKLN1Q9UL63 735 aa13.38□□□□□ -0.27
SYNPO-205ENST00000522122 HCN4Q9Y3Q4 1203 aa13.38□□□□□ -0.27
SYNPO-205ENST00000522122 DNAJC25-GNG10A0A024R161 153 aa13.37□□□□□ -0.27
SYNPO-205ENST00000522122 FBP2O00757 339 aa13.37□□□□□ -0.27
SYNPO-205ENST00000522122 SCAMP1O15126 338 aa13.37□□□□□ -0.27
SYNPO-205ENST00000522122 NOS1APO75052 506 aaPredicted RBP13.37□□□□□ -0.27
SYNPO-205ENST00000522122 ZNF623O75123 536 aa13.37□□□□□ -0.27
SYNPO-205ENST00000522122 TFPIP10646 304 aa13.37□□□□□ -0.27
SYNPO-205ENST00000522122 PSKH1P11801 424 aa13.37□□□□□ -0.27
SYNPO-205ENST00000522122 SLC30A6Q6NXT4 461 aa13.37□□□□□ -0.27
SYNPO-205ENST00000522122 C22orf39Q6P5X5 142 aa13.37□□□□□ -0.27
SYNPO-205ENST00000522122 TICAM1Q8IUC6 712 aa13.37□□□□□ -0.27
SYNPO-205ENST00000522122 PJA1Q8NG27 643 aa13.37□□□□□ -0.27
SYNPO-205ENST00000522122 TNFAIP8L1Q8WVP5 186 aa13.37□□□□□ -0.27
SYNPO-205ENST00000522122 SMPDL3AQ92484 453 aa13.37□□□□□ -0.27
SYNPO-205ENST00000522122 KHSRPQ92945 711 aaKnown RBP eCLIP13.37□□□□□ -0.27
SYNPO-205ENST00000522122 TMEM125Q96AQ2 219 aa13.37□□□□□ -0.27
SYNPO-205ENST00000522122 AKAP8O43823 692 aaKnown RBP13.37□□□□□ -0.27
SYNPO-205ENST00000522122 B3GALT2O43825 422 aa13.37□□□□□ -0.27
SYNPO-205ENST00000522122 XPNPEP2O43895 674 aa13.37□□□□□ -0.27
SYNPO-205ENST00000522122 MAT2AP31153 395 aaKnown RBP13.37□□□□□ -0.27
SYNPO-205ENST00000522122 SMSP52788 366 aa13.37□□□□□ -0.27
SYNPO-205ENST00000522122 RPS13P62277 151 aaKnown RBP13.37□□□□□ -0.27
SYNPO-205ENST00000522122 LRRC32Q14392 662 aa13.37□□□□□ -0.27
SYNPO-205ENST00000522122 CDADC1Q9BWV3 514 aa13.37□□□□□ -0.27
SYNPO-205ENST00000522122 DSN1Q9H410 356 aa13.37□□□□□ -0.27
SYNPO-205ENST00000522122 EHD1Q9H4M9 534 aa13.37□□□□□ -0.27
SYNPO-205ENST00000522122 POLE3Q9NRF9 147 aa13.37□□□□□ -0.27
SYNPO-205ENST00000522122 B4GALT6Q9UBX8 382 aa13.37□□□□□ -0.27
SYNPO-205ENST00000522122 ACP5P13686 325 aa13.37□□□□□ -0.27
SYNPO-205ENST00000522122 GGT1P19440 569 aa13.37□□□□□ -0.27
SYNPO-205ENST00000522122 OLFML2AQ68BL7 652 aa13.37□□□□□ -0.27
SYNPO-205ENST00000522122 NOXRED1Q6NXP6 359 aa13.37□□□□□ -0.27
SYNPO-205ENST00000522122 ZNF280BQ86YH2 543 aa13.37□□□□□ -0.27
SYNPO-205ENST00000522122 REM2Q8IYK8 340 aaPredicted RBP13.37□□□□□ -0.27
SYNPO-205ENST00000522122 ADGRG5Q8IZF4 528 aa13.37□□□□□ -0.27
SYNPO-205ENST00000522122 SIX5Q8N196 739 aa13.37□□□□□ -0.27
SYNPO-205ENST00000522122 PELI3Q8N2H9 469 aa13.37□□□□□ -0.27
SYNPO-205ENST00000522122 TSEN15Q8WW01 171 aaKnown RBP13.37□□□□□ -0.27
SYNPO-205ENST00000522122 TFGQ92734 400 aaPredicted RBP13.37□□□□□ -0.27
SYNPO-205ENST00000522122 TRNT1Q96Q11 434 aaKnown RBP13.37□□□□□ -0.27
SYNPO-205ENST00000522122 TRMT61BQ9BVS5 477 aaKnown RBP13.37□□□□□ -0.27
SYNPO-205ENST00000522122 NEUROD4Q9HD90 331 aa13.37□□□□□ -0.27
SYNPO-205ENST00000522122 SLC35C2Q9NQQ7 365 aa13.37□□□□□ -0.27
SYNPO-205ENST00000522122 STOML2Q9UJZ1 356 aa13.37□□□□□ -0.27
SYNPO-205ENST00000522122 SSC5DA1L4H1 1573 aa13.37□□□□□ -0.27
SYNPO-205ENST00000522122 LSM1O15116 133 aaKnown RBP13.37□□□□□ -0.27
SYNPO-205ENST00000522122 JUNP05412 331 aaKnown RBP13.37□□□□□ -0.27
SYNPO-205ENST00000522122 MAGEA8P43361 318 aa13.37□□□□□ -0.27
SYNPO-205ENST00000522122 DGKEP52429 567 aa13.37□□□□□ -0.27
SYNPO-205ENST00000522122 OR4D2P58180 307 aa13.37□□□□□ -0.27
SYNPO-205ENST00000522122 VBP1P61758 197 aa13.37□□□□□ -0.27
SYNPO-205ENST00000522122 OR10T2Q8NGX3 314 aa13.37□□□□□ -0.27
SYNPO-205ENST00000522122 TAC3Q9UHF0 121 aa13.37□□□□□ -0.27
SYNPO-205ENST00000522122 ERI3O43414 337 aaKnown RBP13.36□□□□□ -0.27
SYNPO-205ENST00000522122 SOCS5O75159 536 aa13.36□□□□□ -0.27
SYNPO-205ENST00000522122 ITGB1P05556 798 aa13.36□□□□□ -0.27
SYNPO-205ENST00000522122 RB1P06400 928 aa13.36□□□□□ -0.27
SYNPO-205ENST00000522122 ZNF26P17031 533 aaPredicted RBP13.36□□□□□ -0.27
SYNPO-205ENST00000522122 FUT4P22083 530 aa13.36□□□□□ -0.27
SYNPO-205ENST00000522122 SHKBP1Q8TBC3 707 aa13.36□□□□□ -0.27
SYNPO-205ENST00000522122 CYB5D2Q8WUJ1 264 aa13.36□□□□□ -0.27
SYNPO-205ENST00000522122 KLK6Q92876 244 aa13.36□□□□□ -0.27
SYNPO-205ENST00000522122 ITPKCQ96DU7 683 aa13.36□□□□□ -0.27
SYNPO-205ENST00000522122 MAELQ96JY0 434 aaKnown RBP13.36□□□□□ -0.27
SYNPO-205ENST00000522122 C11orf84Q9BUA3 381 aaPredicted RBP13.36□□□□□ -0.27
SYNPO-205ENST00000522122 FARSBQ9NSD9 589 aaKnown RBP13.36□□□□□ -0.27
SYNPO-205ENST00000522122 FAM118AQ9NWS6 357 aa13.36□□□□□ -0.27
SYNPO-205ENST00000522122 A0A096LPI6 279 aa13.36□□□□□ -0.27
SYNPO-205ENST00000522122 PRMT3O60678 531 aa13.36□□□□□ -0.27
SYNPO-205ENST00000522122 GBAP04062 536 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms