RNA–Protein interactions for RNA: ENST00000520746.1

HDAC2-208, Transcript of histone deacetylase 2, humanhuman

TSL 3

Gene HDAC2, Length 497 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC2-208ENST00000520746 HHLA1C9JL84 531 aa3.28□□□□□ -1.88
HDAC2-208ENST00000520746 MPHOSPH10O00566 681 aaKnown RBP3.28□□□□□ -1.88
HDAC2-208ENST00000520746 PTGESO14684 152 aa3.28□□□□□ -1.88
HDAC2-208ENST00000520746 ACSL3O95573 720 aa3.28□□□□□ -1.88
HDAC2-208ENST00000520746 EDN1P05305 212 aa3.28□□□□□ -1.88
HDAC2-208ENST00000520746 ATP5BP06576 529 aaKnown RBP3.28□□□□□ -1.88
HDAC2-208ENST00000520746 ASNSP08243 561 aa3.28□□□□□ -1.88
HDAC2-208ENST00000520746 PATE4P0C8F1 98 aa3.28□□□□□ -1.88
HDAC2-208ENST00000520746 UBTFL1P0CB47 393 aaPredicted RBP3.28□□□□□ -1.88
HDAC2-208ENST00000520746 HAPLN1P10915 354 aaPredicted RBP3.28□□□□□ -1.88
HDAC2-208ENST00000520746 KRT5P13647 590 aa3.28□□□□□ -1.88
HDAC2-208ENST00000520746 ERCC2P18074 760 aa3.28□□□□□ -1.88
HDAC2-208ENST00000520746 CYP11B2P19099 503 aa3.28□□□□□ -1.88
HDAC2-208ENST00000520746 EEF1B2P24534 225 aaKnown RBP3.28□□□□□ -1.88
HDAC2-208ENST00000520746 CCR10P46092 362 aa3.28□□□□□ -1.88
HDAC2-208ENST00000520746 ASCL1P50553 236 aa3.28□□□□□ -1.88
HDAC2-208ENST00000520746 BACE1P56817 501 aa3.28□□□□□ -1.88
HDAC2-208ENST00000520746 POLR2LP62875 67 aaKnown RBP3.28□□□□□ -1.88
HDAC2-208ENST00000520746 CDR2Q01850 454 aa3.28□□□□□ -1.88
HDAC2-208ENST00000520746 MECOMQ03112 1051 aa3.28□□□□□ -1.88
HDAC2-208ENST00000520746 GPR17Q13304 367 aa3.28□□□□□ -1.88
HDAC2-208ENST00000520746 VEZF1Q14119 521 aa3.28□□□□□ -1.88
HDAC2-208ENST00000520746 COG2Q14746 738 aa3.28□□□□□ -1.88
HDAC2-208ENST00000520746 CA9Q16790 459 aa3.28□□□□□ -1.88
HDAC2-208ENST00000520746 UGP2Q16851 508 aa3.28□□□□□ -1.88
HDAC2-208ENST00000520746 ZNF876PQ49A33 203 aa3.28□□□□□ -1.88
HDAC2-208ENST00000520746 MCMDC2Q4G0Z9 681 aa3.28□□□□□ -1.88
HDAC2-208ENST00000520746 KRBOX4Q5JUW0 171 aa3.28□□□□□ -1.88
HDAC2-208ENST00000520746 SPDYCQ5MJ68 293 aa3.28□□□□□ -1.88
HDAC2-208ENST00000520746 CYP4A22Q5TCH4 519 aa3.28□□□□□ -1.88
HDAC2-208ENST00000520746 FAM53AQ6NSI3 398 aaPredicted RBP3.28□□□□□ -1.88
HDAC2-208ENST00000520746 SLC16A9Q7RTY1 509 aa3.28□□□□□ -1.88
HDAC2-208ENST00000520746 GPR142Q7Z601 462 aa3.28□□□□□ -1.88
HDAC2-208ENST00000520746 RTN4RL2Q86UN3 420 aa3.28□□□□□ -1.88
HDAC2-208ENST00000520746 APLFQ8IW19 511 aaPredicted RBP3.28□□□□□ -1.88
HDAC2-208ENST00000520746 CAMKVQ8NCB2 501 aa3.28□□□□□ -1.88
HDAC2-208ENST00000520746 TRIM58Q8NG06 486 aa3.28□□□□□ -1.88
HDAC2-208ENST00000520746 PHLDA1Q8WV24 401 aaPredicted RBP3.28□□□□□ -1.88
HDAC2-208ENST00000520746 ANKRD9Q96BM1 317 aaPredicted RBP3.28□□□□□ -1.88
HDAC2-208ENST00000520746 OTUB1Q96FW1 271 aaPredicted RBP3.28□□□□□ -1.88
HDAC2-208ENST00000520746 FNBP1Q96RU3 617 aa3.28□□□□□ -1.88
HDAC2-208ENST00000520746 FEVQ99581 238 aa3.28□□□□□ -1.88
HDAC2-208ENST00000520746 CPNE1Q99829 537 aa3.28□□□□□ -1.88
HDAC2-208ENST00000520746 NAA11Q9BSU3 229 aaPredicted RBP3.28□□□□□ -1.88
HDAC2-208ENST00000520746 AP1M1Q9BXS5 423 aa3.28□□□□□ -1.88
HDAC2-208ENST00000520746 PORCNQ9H237 461 aa3.28□□□□□ -1.88
HDAC2-208ENST00000520746 ST6GALNAC4Q9H4F1 302 aa3.28□□□□□ -1.88
HDAC2-208ENST00000520746 FGF21Q9NSA1 209 aa3.28□□□□□ -1.88
HDAC2-208ENST00000520746 INTS9Q9NV88 658 aaKnown RBP3.28□□□□□ -1.88
HDAC2-208ENST00000520746 DDX43Q9NXZ2 648 aaKnown RBP3.28□□□□□ -1.88
HDAC2-208ENST00000520746 SPHK1Q9NYA1 384 aa3.28□□□□□ -1.88
HDAC2-208ENST00000520746 FLRT3Q9NZU0 649 aa3.28□□□□□ -1.88
HDAC2-208ENST00000520746 TBC1D7Q9P0N9 293 aa3.28□□□□□ -1.88
HDAC2-208ENST00000520746 SMAD5-AS1Q9Y6J3 95 aa3.28□□□□□ -1.88
HDAC2-208ENST00000520746 CENPFP49454 3210 aa3.28□□□□□ -1.88
HDAC2-208ENST00000520746 NOTCH2Q04721 2471 aa3.28□□□□□ -1.88
HDAC2-208ENST00000520746 PFASO15067 1338 aa3.27□□□□□ -1.89
HDAC2-208ENST00000520746 IL16Q14005 1332 aa3.27□□□□□ -1.89
HDAC2-208ENST00000520746 GIMAP1-GIMAP5A0A087WTJ2 511 aa3.27□□□□□ -1.89
HDAC2-208ENST00000520746 IGHV4-61A0A0C4DH41 118 aa3.27□□□□□ -1.89
HDAC2-208ENST00000520746 SLC15A5A6NIM6 579 aa3.27□□□□□ -1.89
HDAC2-208ENST00000520746 ENO4A6NNW6 628 aa3.27□□□□□ -1.89
HDAC2-208ENST00000520746 CLDN4O14493 209 aa3.27□□□□□ -1.89
HDAC2-208ENST00000520746 TRMUO75648 421 aaKnown RBP3.27□□□□□ -1.89
HDAC2-208ENST00000520746 CLPTM1O96005 669 aa3.27□□□□□ -1.89
HDAC2-208ENST00000520746 IGHV4-59P01825 116 aa3.27□□□□□ -1.89
HDAC2-208ENST00000520746 FYNP06241 537 aa3.27□□□□□ -1.89
HDAC2-208ENST00000520746 CCDC175P0C221 793 aa3.27□□□□□ -1.89
HDAC2-208ENST00000520746 CD22P20273 847 aa3.27□□□□□ -1.89
HDAC2-208ENST00000520746 CDH3P22223 829 aa3.27□□□□□ -1.89
HDAC2-208ENST00000520746 CA6P23280 308 aa3.27□□□□□ -1.89
HDAC2-208ENST00000520746 ADORA1P30542 326 aa3.27□□□□□ -1.89
HDAC2-208ENST00000520746 RPL21P46778 160 aaKnown RBP3.27□□□□□ -1.89
HDAC2-208ENST00000520746 LHX1P48742 406 aa3.27□□□□□ -1.89
HDAC2-208ENST00000520746 NOVP48745 357 aa3.27□□□□□ -1.89
HDAC2-208ENST00000520746 LIMK1P53667 647 aa3.27□□□□□ -1.89
HDAC2-208ENST00000520746 RAD23AP54725 363 aa3.27□□□□□ -1.89
HDAC2-208ENST00000520746 TFCP2Q12800 502 aa3.27□□□□□ -1.89
HDAC2-208ENST00000520746 TAF10Q12962 218 aa3.27□□□□□ -1.89
HDAC2-208ENST00000520746 CUL3Q13618 768 aa3.27□□□□□ -1.89
HDAC2-208ENST00000520746 P2RY6Q15077 328 aa3.27□□□□□ -1.89
HDAC2-208ENST00000520746 UGT3A2Q3SY77 523 aa3.27□□□□□ -1.89
HDAC2-208ENST00000520746 TCTE1Q5JU00 501 aa3.27□□□□□ -1.89
HDAC2-208ENST00000520746 CCDC158Q5M9N0 1113 aa3.27□□□□□ -1.89
HDAC2-208ENST00000520746 FFAR4Q5NUL3 377 aa3.27□□□□□ -1.89
HDAC2-208ENST00000520746 ARHGAP17Q68EM7 881 aa3.27□□□□□ -1.89
HDAC2-208ENST00000520746 ARHGAP11AQ6P4F7 1023 aa3.27□□□□□ -1.89
HDAC2-208ENST00000520746 CCDC186Q7Z3E2 898 aa3.27□□□□□ -1.89
HDAC2-208ENST00000520746 ZNF611Q8N823 705 aa3.27□□□□□ -1.89
HDAC2-208ENST00000520746 FAM76AQ8TAV0 307 aa3.27□□□□□ -1.89
HDAC2-208ENST00000520746 ROBO4Q8WZ75 1007 aa3.27□□□□□ -1.89
HDAC2-208ENST00000520746 GIMAP5Q96F15 307 aa3.27□□□□□ -1.89
HDAC2-208ENST00000520746 FAM129AQ9BZQ8 928 aa3.27□□□□□ -1.89
HDAC2-208ENST00000520746 AATFQ9NY61 560 aaKnown RBP eCLIP3.27□□□□□ -1.89
HDAC2-208ENST00000520746 HOXC10Q9NYD6 342 aa3.27□□□□□ -1.89
HDAC2-208ENST00000520746 PA2G4Q9UQ80 394 aaKnown RBP3.27□□□□□ -1.89
HDAC2-208ENST00000520746 RPAP1Q9BWH6 1393 aaPredicted RBP3.26□□□□□ -1.89
HDAC2-208ENST00000520746 MROH7-TTC4A0A0A0MT08 1334 aa3.26□□□□□ -1.89
HDAC2-208ENST00000520746 SALL1Q9NSC2 1324 aa3.26□□□□□ -1.89
HDAC2-208ENST00000520746 A0A1B0GUL7 405 aa3.26□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms