RNA–Protein interactions for RNA: ENST00000520602.5

MCF2-209, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene MCF2, Length 3,945 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-209ENST00000520602 ZW10O43264 779 aa9.78□□□□□ -0.84
MCF2-209ENST00000520602 ITGB7P26010 798 aa9.78□□□□□ -0.84
MCF2-209ENST00000520602 CTSKP43235 329 aa9.78□□□□□ -0.84
MCF2-209ENST00000520602 SOX9P48436 509 aa9.78□□□□□ -0.84
MCF2-209ENST00000520602 RAB8AP61006 207 aa9.78□□□□□ -0.84
MCF2-209ENST00000520602 NXPE4Q6UWF7 544 aa9.78□□□□□ -0.84
MCF2-209ENST00000520602 NAGSQ8N159 534 aa9.78□□□□□ -0.84
MCF2-209ENST00000520602 ZNF548Q8NEK5 533 aaPredicted RBP9.78□□□□□ -0.84
MCF2-209ENST00000520602 CNIH3Q8TBE1 160 aa9.78□□□□□ -0.84
MCF2-209ENST00000520602 KLHL25Q9H0H3 589 aa9.78□□□□□ -0.84
MCF2-209ENST00000520602 KAT8Q9H7Z6 458 aaKnown RBP9.78□□□□□ -0.84
MCF2-209ENST00000520602 SFXN1Q9H9B4 322 aa9.78□□□□□ -0.84
MCF2-209ENST00000520602 RHCGQ9UBD6 479 aa9.78□□□□□ -0.84
MCF2-209ENST00000520602 A0A1W2PPW3 197 aa9.77□□□□□ -0.84
MCF2-209ENST00000520602 SCAMP2O15127 329 aaKnown RBP9.77□□□□□ -0.84
MCF2-209ENST00000520602 PDPK1O15530 556 aa9.77□□□□□ -0.84
MCF2-209ENST00000520602 PRMT3O60678 531 aa9.77□□□□□ -0.84
MCF2-209ENST00000520602 ZNF821O75541 412 aaPredicted RBP9.77□□□□□ -0.84
MCF2-209ENST00000520602 C1orf105O95561 183 aa9.77□□□□□ -0.84
MCF2-209ENST00000520602 IFNW1P05000 195 aa9.77□□□□□ -0.84
MCF2-209ENST00000520602 NUDT7P0C024 238 aa9.77□□□□□ -0.84
MCF2-209ENST00000520602 MYF6P23409 242 aa9.77□□□□□ -0.84
MCF2-209ENST00000520602 POLR2IP36954 125 aaKnown RBP9.77□□□□□ -0.84
MCF2-209ENST00000520602 IL12RB1P42701 662 aa9.77□□□□□ -0.84
MCF2-209ENST00000520602 C21orf59P57076 290 aa9.77□□□□□ -0.84
MCF2-209ENST00000520602 NHSL2Q5HYW2 709 aa9.77□□□□□ -0.84
MCF2-209ENST00000520602 HENMT1Q5T8I9 393 aaKnown RBP9.77□□□□□ -0.84
MCF2-209ENST00000520602 TANGO2Q6ICL3 276 aa9.77□□□□□ -0.84
MCF2-209ENST00000520602 ENPP7Q6UWV6 458 aa9.77□□□□□ -0.84
MCF2-209ENST00000520602 CEACAM20Q6UY09 585 aa9.77□□□□□ -0.84
MCF2-209ENST00000520602 OOSP2Q86WS3 158 aa9.77□□□□□ -0.84
MCF2-209ENST00000520602 FAM20CQ8IXL6 584 aa9.77□□□□□ -0.84
MCF2-209ENST00000520602 OR9Q1Q8NGQ5 310 aa9.77□□□□□ -0.84
MCF2-209ENST00000520602 UBTD2Q8WUN7 234 aa9.77□□□□□ -0.84
MCF2-209ENST00000520602 HERVK_113Q902F9 699 aa9.77□□□□□ -0.84
MCF2-209ENST00000520602 USP7Q93009 1102 aa9.77□□□□□ -0.84
MCF2-209ENST00000520602 POP5Q969H6 163 aaKnown RBP9.77□□□□□ -0.84
MCF2-209ENST00000520602 C12orf43Q96C57 262 aaKnown RBP9.77□□□□□ -0.84
MCF2-209ENST00000520602 C17orf62Q9BQA9 187 aa9.77□□□□□ -0.84
MCF2-209ENST00000520602 CCDC3Q9BQI4 270 aa9.77□□□□□ -0.84
MCF2-209ENST00000520602 AASSQ9UDR5 926 aa9.77□□□□□ -0.84
MCF2-209ENST00000520602 PSME2Q9UL46 239 aa9.77□□□□□ -0.84
MCF2-209ENST00000520602 STON1Q9Y6Q2 735 aa9.77□□□□□ -0.84
MCF2-209ENST00000520602 CROCCQ5TZA2 2017 aa9.77□□□□□ -0.85
MCF2-209ENST00000520602 RFXAPO00287 272 aa9.77□□□□□ -0.85
MCF2-209ENST00000520602 KMOO15229 486 aa9.77□□□□□ -0.85
MCF2-209ENST00000520602 ERI3O43414 337 aaKnown RBP9.77□□□□□ -0.85
MCF2-209ENST00000520602 PRR35P0CG20 571 aa9.77□□□□□ -0.85
MCF2-209ENST00000520602 PCSK2P16519 638 aa9.77□□□□□ -0.85
MCF2-209ENST00000520602 DCTP40126 519 aa9.77□□□□□ -0.85
MCF2-209ENST00000520602 ACTR1BP42025 376 aa9.77□□□□□ -0.85
MCF2-209ENST00000520602 ACTR1AP61163 376 aa9.77□□□□□ -0.85
MCF2-209ENST00000520602 TUBA4AP68366 448 aa9.77□□□□□ -0.85
MCF2-209ENST00000520602 LRRC32Q14392 662 aa9.77□□□□□ -0.85
MCF2-209ENST00000520602 CST6Q15828 149 aa9.77□□□□□ -0.85
MCF2-209ENST00000520602 ITPRIPL2Q3MIP1 535 aa9.77□□□□□ -0.85
MCF2-209ENST00000520602 KCTD21Q4G0X4 260 aa9.77□□□□□ -0.85
MCF2-209ENST00000520602 EEF1AKMT2Q5JPI9 291 aaKnown RBP9.77□□□□□ -0.85
MCF2-209ENST00000520602 ATAD3BQ5T9A4 648 aa9.77□□□□□ -0.85
MCF2-209ENST00000520602 TBPL2Q6SJ96 375 aa9.77□□□□□ -0.85
MCF2-209ENST00000520602 CASP12Q6UXS9 341 aa9.77□□□□□ -0.85
MCF2-209ENST00000520602 WDR48Q8TAF3 677 aa9.77□□□□□ -0.85
MCF2-209ENST00000520602 CIDECQ96AQ7 238 aaPredicted RBP9.77□□□□□ -0.85
MCF2-209ENST00000520602 MRPS30Q9NP92 439 aaKnown RBP9.77□□□□□ -0.85
MCF2-209ENST00000520602 ZCCHC3Q9NUD5 404 aaKnown RBP9.77□□□□□ -0.85
MCF2-209ENST00000520602 DCAF13Q9NV06 445 aaKnown RBP9.77□□□□□ -0.85
MCF2-209ENST00000520602 OLAHQ9NV23 265 aa9.77□□□□□ -0.85
MCF2-209ENST00000520602 FAM118AQ9NWS6 357 aa9.77□□□□□ -0.85
MCF2-209ENST00000520602 SLC27A6Q9Y2P4 619 aa9.77□□□□□ -0.85
MCF2-209ENST00000520602 PCDHGB3Q9Y5G1 929 aa9.77□□□□□ -0.85
MCF2-209ENST00000520602 ADAMDEC1O15204 470 aa9.77□□□□□ -0.85
MCF2-209ENST00000520602 GREM1O60565 184 aa9.77□□□□□ -0.85
MCF2-209ENST00000520602 GUCY1B2O75343 617 aa9.77□□□□□ -0.85
MCF2-209ENST00000520602 SLCO2B1O94956 709 aa9.77□□□□□ -0.85
MCF2-209ENST00000520602 BCHEP06276 602 aa9.77□□□□□ -0.85
MCF2-209ENST00000520602 TJAP1Q5JTD0 557 aa9.77□□□□□ -0.85
MCF2-209ENST00000520602 EGFLAMQ63HQ2 1017 aa9.77□□□□□ -0.85
MCF2-209ENST00000520602 HMGN2P46Q86SG4 172 aa9.77□□□□□ -0.85
MCF2-209ENST00000520602 CARM1Q86X55 608 aa9.77□□□□□ -0.85
MCF2-209ENST00000520602 PTRH1Q86Y79 214 aaKnown RBP9.77□□□□□ -0.85
MCF2-209ENST00000520602 L3MBTL4Q8NA19 623 aa9.77□□□□□ -0.85
MCF2-209ENST00000520602 OR4E2Q8NGC2 313 aa9.77□□□□□ -0.85
MCF2-209ENST00000520602 ZCCHC10Q8TBK6 192 aa9.77□□□□□ -0.85
MCF2-209ENST00000520602 SIPA1Q96FS4 1042 aa9.77□□□□□ -0.85
MCF2-209ENST00000520602 ACTL8Q9H568 366 aa9.77□□□□□ -0.85
MCF2-209ENST00000520602 TMEM45AQ9NWC5 275 aa9.77□□□□□ -0.85
MCF2-209ENST00000520602 CLDND1Q9NY35 253 aa9.77□□□□□ -0.85
MCF2-209ENST00000520602 SLC25A37Q9NYZ2 338 aa9.77□□□□□ -0.85
MCF2-209ENST00000520602 GULP1Q9UBP9 304 aa9.77□□□□□ -0.85
MCF2-209ENST00000520602 A0A1W2PQU0 124 aa9.76□□□□□ -0.85
MCF2-209ENST00000520602 VEGFDO43915 354 aa9.76□□□□□ -0.85
MCF2-209ENST00000520602 SERPINB7O75635 380 aa9.76□□□□□ -0.85
MCF2-209ENST00000520602 C8orf89P0DMQ9 161 aa9.76□□□□□ -0.85
MCF2-209ENST00000520602 HSD3B1P14060 373 aa9.76□□□□□ -0.85
MCF2-209ENST00000520602 FPR1P21462 350 aa9.76□□□□□ -0.85
MCF2-209ENST00000520602 HSD3B2P26439 372 aa9.76□□□□□ -0.85
MCF2-209ENST00000520602 DAB2P98082 770 aa9.76□□□□□ -0.85
MCF2-209ENST00000520602 SMU1Q2TAY7 513 aa9.76□□□□□ -0.85
MCF2-209ENST00000520602 NEK10Q6ZWH5 1172 aa9.76□□□□□ -0.85
MCF2-209ENST00000520602 ARHGAP22Q7Z5H3 698 aa9.76□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms