RNA–Protein interactions for RNA: ENST00000520493.1

SQLE-204, Transcript of squalene epoxidase, humanhuman

TSL 3

Gene SQLE, Length 737 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-204ENST00000520493 SUSD4Q5VX71 490 aa3.7□□□□□ -1.82
SQLE-204ENST00000520493 LYSMD4Q5XG99 296 aa3.7□□□□□ -1.82
SQLE-204ENST00000520493 OR4A47Q6IF82 309 aa3.7□□□□□ -1.82
SQLE-204ENST00000520493 ZCCHC12Q6PEW1 402 aa3.7□□□□□ -1.82
SQLE-204ENST00000520493 PRSS55Q6UWB4 352 aaPredicted RBP3.7□□□□□ -1.82
SQLE-204ENST00000520493 BTNL8Q6UX41 500 aa3.7□□□□□ -1.82
SQLE-204ENST00000520493 TMEM139Q8IV31 216 aa3.7□□□□□ -1.82
SQLE-204ENST00000520493 FBXW8Q8N3Y1 598 aa3.7□□□□□ -1.82
SQLE-204ENST00000520493 OR1J1Q8NGS3 322 aa3.7□□□□□ -1.82
SQLE-204ENST00000520493 SPATA18Q8TC71 538 aa3.7□□□□□ -1.82
SQLE-204ENST00000520493 GRHL3Q8TE85 626 aa3.7□□□□□ -1.82
SQLE-204ENST00000520493 ZNF473Q8WTR7 871 aaKnown RBP3.7□□□□□ -1.82
SQLE-204ENST00000520493 PHLDA1Q8WV24 401 aaPredicted RBP3.7□□□□□ -1.82
SQLE-204ENST00000520493 SLCO4A1Q96BD0 722 aa3.7□□□□□ -1.82
SQLE-204ENST00000520493 EPSTI1Q96J88 318 aa3.7□□□□□ -1.82
SQLE-204ENST00000520493 PGLYRP2Q96PD5 576 aa3.7□□□□□ -1.82
SQLE-204ENST00000520493 RASL10BQ96S79 203 aa3.7□□□□□ -1.82
SQLE-204ENST00000520493 MAP3K3Q99759 626 aa3.7□□□□□ -1.82
SQLE-204ENST00000520493 CRACR2AQ9BSW2 395 aa3.7□□□□□ -1.82
SQLE-204ENST00000520493 TRMT61BQ9BVS5 477 aaKnown RBP3.7□□□□□ -1.82
SQLE-204ENST00000520493 CDK19Q9BWU1 502 aa3.7□□□□□ -1.82
SQLE-204ENST00000520493 SDCBP2Q9H190 292 aa3.7□□□□□ -1.82
SQLE-204ENST00000520493 DPH5Q9H2P9 285 aa3.7□□□□□ -1.82
SQLE-204ENST00000520493 PPANQ9NQ55 473 aaKnown RBP3.7□□□□□ -1.82
SQLE-204ENST00000520493 GPR173Q9NS66 373 aa3.7□□□□□ -1.82
SQLE-204ENST00000520493 SLC35D1Q9NTN3 355 aa3.7□□□□□ -1.82
SQLE-204ENST00000520493 MIS18AQ9NYP9 233 aa3.7□□□□□ -1.82
SQLE-204ENST00000520493 DNPEPQ9ULA0 475 aa3.7□□□□□ -1.82
SQLE-204ENST00000520493 KCNK6Q9Y257 313 aa3.7□□□□□ -1.82
SQLE-204ENST00000520493 EXOC6BQ9Y2D4 811 aa3.7□□□□□ -1.82
SQLE-204ENST00000520493 PLEKHA6Q9Y2H5 1048 aa3.7□□□□□ -1.82
SQLE-204ENST00000520493 HBS1LQ9Y450 684 aaKnown RBP3.7□□□□□ -1.82
SQLE-204ENST00000520493 UBE4BO95155 1302 aa3.7□□□□□ -1.82
SQLE-204ENST00000520493 ANKRD61A6NGH8 418 aa3.69□□□□□ -1.82
SQLE-204ENST00000520493 C2CD4DB7Z1M9 353 aa3.69□□□□□ -1.82
SQLE-204ENST00000520493 F8VVB4 439 aa3.69□□□□□ -1.82
SQLE-204ENST00000520493 F8VWA3 439 aa3.69□□□□□ -1.82
SQLE-204ENST00000520493 MPHOSPH10O00566 681 aaKnown RBP3.69□□□□□ -1.82
SQLE-204ENST00000520493 ANGPT2O15123 496 aa3.69□□□□□ -1.82
SQLE-204ENST00000520493 CXCL14O95715 111 aa3.69□□□□□ -1.82
SQLE-204ENST00000520493 PDGFBP01127 241 aaPredicted RBP3.69□□□□□ -1.82
SQLE-204ENST00000520493 IFNB1P01574 187 aa3.69□□□□□ -1.82
SQLE-204ENST00000520493 CXCL10P02778 98 aa3.69□□□□□ -1.82
SQLE-204ENST00000520493 MMP10P09238 476 aa3.69□□□□□ -1.82
SQLE-204ENST00000520493 RNF224P0DH78 156 aa3.69□□□□□ -1.82
SQLE-204ENST00000520493 RPS2P15880 293 aaKnown RBP3.69□□□□□ -1.82
SQLE-204ENST00000520493 EFNA1P20827 205 aaPredicted RBP3.69□□□□□ -1.82
SQLE-204ENST00000520493 DNAJB1P25685 340 aa3.69□□□□□ -1.82
SQLE-204ENST00000520493 ELAVL4P26378 380 aaKnown RBP3.69□□□□□ -1.82
SQLE-204ENST00000520493 MARK3P27448 753 aa3.69□□□□□ -1.82
SQLE-204ENST00000520493 MAGEB1P43366 347 aa3.69□□□□□ -1.82
SQLE-204ENST00000520493 CRIP2P52943 208 aaPredicted RBP3.69□□□□□ -1.82
SQLE-204ENST00000520493 PRKCEQ02156 737 aa3.69□□□□□ -1.82
SQLE-204ENST00000520493 SLC34A1Q06495 639 aa3.69□□□□□ -1.82
SQLE-204ENST00000520493 IL10RBQ08334 325 aa3.69□□□□□ -1.82
SQLE-204ENST00000520493 LGALS3BPQ08380 585 aa3.69□□□□□ -1.82
SQLE-204ENST00000520493 ZNF415Q09FC8 603 aa3.69□□□□□ -1.82
SQLE-204ENST00000520493 TRIM29Q14134 588 aa3.69□□□□□ -1.82
SQLE-204ENST00000520493 TAF13Q15543 124 aa3.69□□□□□ -1.82
SQLE-204ENST00000520493 KRT71Q3SY84 523 aa3.69□□□□□ -1.82
SQLE-204ENST00000520493 FASTKD1Q53R41 847 aaKnown RBP3.69□□□□□ -1.82
SQLE-204ENST00000520493 SPDYCQ5MJ68 293 aa3.69□□□□□ -1.82
SQLE-204ENST00000520493 AGAP6Q5VW22 663 aa3.69□□□□□ -1.82
SQLE-204ENST00000520493 CES4AQ5XG92 561 aa3.69□□□□□ -1.82
SQLE-204ENST00000520493 FAM166AQ6J272 317 aa3.69□□□□□ -1.82
SQLE-204ENST00000520493 KDELC1Q6UW63 502 aa3.69□□□□□ -1.82
SQLE-204ENST00000520493 B3GLCTQ6Y288 498 aa3.69□□□□□ -1.82
SQLE-204ENST00000520493 IL17RELQ6ZVW7 336 aa3.69□□□□□ -1.82
SQLE-204ENST00000520493 MARK2Q7KZI7 788 aaKnown RBP3.69□□□□□ -1.82
SQLE-204ENST00000520493 TMEM110Q86TL2 294 aa3.69□□□□□ -1.82
SQLE-204ENST00000520493 SYVN1Q86TM6 617 aa3.69□□□□□ -1.82
SQLE-204ENST00000520493 APCDD1Q8J025 514 aa3.69□□□□□ -1.82
SQLE-204ENST00000520493 LGI2Q8N0V4 545 aa3.69□□□□□ -1.82
SQLE-204ENST00000520493 CNBD1Q8NA66 436 aa3.69□□□□□ -1.82
SQLE-204ENST00000520493 CCNYQ8ND76 341 aa3.69□□□□□ -1.82
SQLE-204ENST00000520493 SLC24A4Q8NFF2 622 aa3.69□□□□□ -1.82
SQLE-204ENST00000520493 OR52N5Q8NH56 324 aa3.69□□□□□ -1.82
SQLE-204ENST00000520493 SLC47A1Q96FL8 570 aa3.69□□□□□ -1.82
SQLE-204ENST00000520493 DTD2Q96FN9 168 aa3.69□□□□□ -1.82
SQLE-204ENST00000520493 FAM20AQ96MK3 541 aa3.69□□□□□ -1.82
SQLE-204ENST00000520493 SPATA13Q96N96 652 aa3.69□□□□□ -1.82
SQLE-204ENST00000520493 ZNF583Q96ND8 569 aa3.69□□□□□ -1.82
SQLE-204ENST00000520493 PITPNM3Q9BZ71 974 aa3.69□□□□□ -1.82
SQLE-204ENST00000520493 GPN1Q9HCN4 374 aaPredicted RBP3.69□□□□□ -1.82
SQLE-204ENST00000520493 CGNQ9P2M7 1197 aaKnown RBP3.69□□□□□ -1.82
SQLE-204ENST00000520493 DAPK2Q9UIK4 370 aa3.69□□□□□ -1.82
SQLE-204ENST00000520493 GAB2Q9UQC2 676 aa3.69□□□□□ -1.82
SQLE-204ENST00000520493 TMED3Q9Y3Q3 217 aa3.69□□□□□ -1.82
SQLE-204ENST00000520493 A0A087X0K7 114 aa3.68□□□□□ -1.82
SQLE-204ENST00000520493 TNFSF12-TNFSF13A0A0A6YY99 330 aa3.68□□□□□ -1.82
SQLE-204ENST00000520493 TLR4O00206 839 aa3.68□□□□□ -1.82
SQLE-204ENST00000520493 SCO2O43819 266 aa3.68□□□□□ -1.82
SQLE-204ENST00000520493 EDIL3O43854 480 aa3.68□□□□□ -1.82
SQLE-204ENST00000520493 PRKNO60260 465 aaPredicted RBP3.68□□□□□ -1.82
SQLE-204ENST00000520493 KRT33AO76009 404 aa3.68□□□□□ -1.82
SQLE-204ENST00000520493 APOHP02749 345 aaPredicted RBP3.68□□□□□ -1.82
SQLE-204ENST00000520493 PGK2P07205 417 aa3.68□□□□□ -1.82
SQLE-204ENST00000520493 ZNF18P17022 549 aa3.68□□□□□ -1.82
SQLE-204ENST00000520493 JAK1P23458 1154 aa3.68□□□□□ -1.82
SQLE-204ENST00000520493 CHRNA3P32297 505 aa3.68□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms