RNA–Protein interactions for RNA: ENST00000520062.1

HMGB1P46-201, Transcript of high mobility group box 1 pseudogene 46, humanhuman

BASIC

Gene HMGB1P46, Length 610 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P46-201ENST00000520062 ELF5Q9UKW6 265 aaPredicted RBP4.76□□□□□ -1.65
HMGB1P46-201ENST00000520062 CCPG1Q9ULG6 757 aa4.76□□□□□ -1.65
HMGB1P46-201ENST00000520062 FAM172BPA6NC97 362 aa4.75□□□□□ -1.65
HMGB1P46-201ENST00000520062 SLC15A5A6NIM6 579 aa4.75□□□□□ -1.65
HMGB1P46-201ENST00000520062 HSF2BPO75031 334 aa4.75□□□□□ -1.65
HMGB1P46-201ENST00000520062 KRT36O76013 467 aa4.75□□□□□ -1.65
HMGB1P46-201ENST00000520062 CXCL14O95715 111 aa4.75□□□□□ -1.65
HMGB1P46-201ENST00000520062 CRYAAP02489 173 aa4.75□□□□□ -1.65
HMGB1P46-201ENST00000520062 CCDC192P0DO97 292 aa4.75□□□□□ -1.65
HMGB1P46-201ENST00000520062 CALRP27797 417 aaKnown RBP4.75□□□□□ -1.65
HMGB1P46-201ENST00000520062 ATXN3P54252 364 aaPredicted RBP4.75□□□□□ -1.65
HMGB1P46-201ENST00000520062 SRSF9Q13242 221 aaKnown RBP eCLIP4.75□□□□□ -1.65
HMGB1P46-201ENST00000520062 TRA2AQ13595 282 aaKnown RBP eCLIP4.75□□□□□ -1.65
HMGB1P46-201ENST00000520062 C19orf48Q6RUI8 117 aa4.75□□□□□ -1.65
HMGB1P46-201ENST00000520062 RBMS3Q6XE24 437 aaKnown RBP4.75□□□□□ -1.65
HMGB1P46-201ENST00000520062 SLC24A5Q71RS6 500 aa4.75□□□□□ -1.65
HMGB1P46-201ENST00000520062 ZNF771Q7L3S4 317 aaPredicted RBP4.75□□□□□ -1.65
HMGB1P46-201ENST00000520062 FCRLAQ7L513 359 aa4.75□□□□□ -1.65
HMGB1P46-201ENST00000520062 GPC2Q8N158 579 aa4.75□□□□□ -1.65
HMGB1P46-201ENST00000520062 THEM5Q8N1Q8 247 aa4.75□□□□□ -1.65
HMGB1P46-201ENST00000520062 RNF149Q8NC42 400 aa4.75□□□□□ -1.65
HMGB1P46-201ENST00000520062 SLC37A3Q8NCC5 494 aa4.75□□□□□ -1.65
HMGB1P46-201ENST00000520062 CNNM3Q8NE01 707 aa4.75□□□□□ -1.65
HMGB1P46-201ENST00000520062 NEK11Q8NG66 645 aa4.75□□□□□ -1.65
HMGB1P46-201ENST00000520062 HPSE2Q8WWQ2 592 aa4.75□□□□□ -1.65
HMGB1P46-201ENST00000520062 DYRK2Q92630 601 aa4.75□□□□□ -1.65
HMGB1P46-201ENST00000520062 FAM46BQ96A09 425 aa4.75□□□□□ -1.65
HMGB1P46-201ENST00000520062 DTD2Q96FN9 168 aa4.75□□□□□ -1.65
HMGB1P46-201ENST00000520062 GUCD1Q96NT3 240 aa4.75□□□□□ -1.65
HMGB1P46-201ENST00000520062 WACQ9BTA9 647 aa4.75□□□□□ -1.65
HMGB1P46-201ENST00000520062 KCNMB3Q9NPA1 279 aa4.75□□□□□ -1.65
HMGB1P46-201ENST00000520062 ZCCHC3Q9NUD5 404 aaKnown RBP4.75□□□□□ -1.65
HMGB1P46-201ENST00000520062 TBC1D13Q9NVG8 400 aa4.75□□□□□ -1.65
HMGB1P46-201ENST00000520062 ZKSCAN7Q9P0L1 754 aaPredicted RBP4.75□□□□□ -1.65
HMGB1P46-201ENST00000520062 TMED7Q9Y3B3 224 aa4.75□□□□□ -1.65
HMGB1P46-201ENST00000520062 MTMR11A4FU01 709 aa4.74□□□□□ -1.65
HMGB1P46-201ENST00000520062 TLR4O00206 839 aa4.74□□□□□ -1.65
HMGB1P46-201ENST00000520062 SLC28A1O00337 649 aa4.74□□□□□ -1.65
HMGB1P46-201ENST00000520062 FPGTO14772 594 aa4.74□□□□□ -1.65
HMGB1P46-201ENST00000520062 TEX28O15482 410 aa4.74□□□□□ -1.65
HMGB1P46-201ENST00000520062 FGF17O60258 216 aa4.74□□□□□ -1.65
HMGB1P46-201ENST00000520062 CLPTM1O96005 669 aa4.74□□□□□ -1.65
HMGB1P46-201ENST00000520062 PAK4O96013 591 aaPredicted RBP4.74□□□□□ -1.65
HMGB1P46-201ENST00000520062 SLC4A1P02730 911 aa4.74□□□□□ -1.65
HMGB1P46-201ENST00000520062 VTNP04004 478 aa4.74□□□□□ -1.65
HMGB1P46-201ENST00000520062 GPIP06744 558 aa4.74□□□□□ -1.65
HMGB1P46-201ENST00000520062 AREGP15514 252 aa4.74□□□□□ -1.65
HMGB1P46-201ENST00000520062 ZNF18P17022 549 aa4.74□□□□□ -1.65
HMGB1P46-201ENST00000520062 CYP3A5P20815 502 aa4.74□□□□□ -1.65
HMGB1P46-201ENST00000520062 CDKN1AP38936 164 aa4.74□□□□□ -1.65
HMGB1P46-201ENST00000520062 MAGEA11P43364 429 aa4.74□□□□□ -1.65
HMGB1P46-201ENST00000520062 NR0B1P51843 470 aaKnown RBP4.74□□□□□ -1.65
HMGB1P46-201ENST00000520062 CDR2Q01850 454 aa4.74□□□□□ -1.65
HMGB1P46-201ENST00000520062 SGCGQ13326 291 aa4.74□□□□□ -1.65
HMGB1P46-201ENST00000520062 PTPN14Q15678 1187 aa4.74□□□□□ -1.65
HMGB1P46-201ENST00000520062 ZRSR1Q15695 479 aaKnown RBP4.74□□□□□ -1.65
HMGB1P46-201ENST00000520062 EXT1Q16394 746 aa4.74□□□□□ -1.65
HMGB1P46-201ENST00000520062 FGD3Q5JSP0 725 aa4.74□□□□□ -1.65
HMGB1P46-201ENST00000520062 DHRS11Q6UWP2 260 aa4.74□□□□□ -1.65
HMGB1P46-201ENST00000520062 MFSD7Q6UXD7 560 aa4.74□□□□□ -1.65
HMGB1P46-201ENST00000520062 DLEU7Q6UYE1 221 aa4.74□□□□□ -1.65
HMGB1P46-201ENST00000520062 MACC1Q6ZN28 852 aa4.74□□□□□ -1.65
HMGB1P46-201ENST00000520062 C15orf52Q6ZUT6 534 aaKnown RBP4.74□□□□□ -1.65
HMGB1P46-201ENST00000520062 TRPT1Q86TN4 253 aaKnown RBP4.74□□□□□ -1.65
HMGB1P46-201ENST00000520062 CIARTQ8N365 385 aaPredicted RBP4.74□□□□□ -1.65
HMGB1P46-201ENST00000520062 FBXW8Q8N3Y1 598 aa4.74□□□□□ -1.65
HMGB1P46-201ENST00000520062 STPG4Q8N801 248 aa4.74□□□□□ -1.65
HMGB1P46-201ENST00000520062 SMYD1Q8NB12 490 aa4.74□□□□□ -1.65
HMGB1P46-201ENST00000520062 OR1L3Q8NH93 324 aa4.74□□□□□ -1.65
HMGB1P46-201ENST00000520062 PRCCQ92733 491 aaPredicted RBP4.74□□□□□ -1.65
HMGB1P46-201ENST00000520062 TAF4BQ92750 862 aa4.74□□□□□ -1.65
HMGB1P46-201ENST00000520062 HAS2Q92819 552 aa4.74□□□□□ -1.65
HMGB1P46-201ENST00000520062 WBP2Q969T9 261 aa4.74□□□□□ -1.65
HMGB1P46-201ENST00000520062 FAM111AQ96PZ2 611 aa4.74□□□□□ -1.65
HMGB1P46-201ENST00000520062 XPO4Q9C0E2 1151 aaKnown RBP4.74□□□□□ -1.65
HMGB1P46-201ENST00000520062 CARD9Q9H257 536 aa4.74□□□□□ -1.65
HMGB1P46-201ENST00000520062 DPEP2Q9H4A9 486 aa4.74□□□□□ -1.65
HMGB1P46-201ENST00000520062 EGLN3Q9H6Z9 239 aa4.74□□□□□ -1.65
HMGB1P46-201ENST00000520062 ZNF556Q9HAH1 456 aa4.74□□□□□ -1.65
HMGB1P46-201ENST00000520062 SIX2Q9NPC8 291 aa4.74□□□□□ -1.65
HMGB1P46-201ENST00000520062 INTS9Q9NV88 658 aaKnown RBP4.74□□□□□ -1.65
HMGB1P46-201ENST00000520062 KCNN3Q9UGI6 736 aa4.74□□□□□ -1.65
HMGB1P46-201ENST00000520062 COLEC10Q9Y6Z7 277 aa4.74□□□□□ -1.65
HMGB1P46-201ENST00000520062 CACNA1IQ9P0X4 2223 aa4.73□□□□□ -1.65
HMGB1P46-201ENST00000520062 PCSK5Q92824 1860 aa4.73□□□□□ -1.65
HMGB1P46-201ENST00000520062 GIMAP1-GIMAP5A0A087WTJ2 511 aa4.73□□□□□ -1.65
HMGB1P46-201ENST00000520062 P2RY10O00398 339 aa4.73□□□□□ -1.65
HMGB1P46-201ENST00000520062 MAGEB2O15479 319 aa4.73□□□□□ -1.65
HMGB1P46-201ENST00000520062 EXTL3O43909 919 aa4.73□□□□□ -1.65
HMGB1P46-201ENST00000520062 KIF5CO60282 957 aa4.73□□□□□ -1.65
HMGB1P46-201ENST00000520062 CIDEAO60543 219 aa4.73□□□□□ -1.65
HMGB1P46-201ENST00000520062 UGT1A6P19224 532 aa4.73□□□□□ -1.65
HMGB1P46-201ENST00000520062 CCNA2P20248 432 aa4.73□□□□□ -1.65
HMGB1P46-201ENST00000520062 ACP1P24666 158 aa4.73□□□□□ -1.65
HMGB1P46-201ENST00000520062 SFNP31947 248 aa4.73□□□□□ -1.65
HMGB1P46-201ENST00000520062 HUNKP57058 714 aa4.73□□□□□ -1.65
HMGB1P46-201ENST00000520062 EVCP57679 992 aa4.73□□□□□ -1.65
HMGB1P46-201ENST00000520062 OR1D5P58170 312 aa4.73□□□□□ -1.65
HMGB1P46-201ENST00000520062 ERVFC1-1P60608 527 aa4.73□□□□□ -1.65
HMGB1P46-201ENST00000520062 GALK2Q01415 458 aa4.73□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms