RNA–Protein interactions for RNA: ENST00000519489.1

CTNNA1-216, Transcript of catenin alpha 1, humanhuman

TSL 2

Gene CTNNA1, Length 358 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-216ENST00000519489 PSD4Q8NDX1 1056 aa6.2□□□□□ -1.42
CTNNA1-216ENST00000519489 MBD3L2Q8NHZ7 208 aaPredicted RBP6.2□□□□□ -1.42
CTNNA1-216ENST00000519489 SLC44A1Q8WWI5 657 aa6.2□□□□□ -1.42
CTNNA1-216ENST00000519489 AKAP1Q92667 903 aaKnown RBP eCLIP6.2□□□□□ -1.42
CTNNA1-216ENST00000519489 LINC00615Q96LM1 132 aaPredicted RBP6.2□□□□□ -1.42
CTNNA1-216ENST00000519489 SPATA13Q96N96 652 aa6.2□□□□□ -1.42
CTNNA1-216ENST00000519489 TTC25Q96NG3 672 aa6.2□□□□□ -1.42
CTNNA1-216ENST00000519489 QRFPRQ96P65 431 aa6.2□□□□□ -1.42
CTNNA1-216ENST00000519489 PEBP4Q96S96 227 aa6.2□□□□□ -1.42
CTNNA1-216ENST00000519489 RHNO1Q9BSD3 238 aa6.2□□□□□ -1.42
CTNNA1-216ENST00000519489 CNPY3Q9BT09 278 aa6.2□□□□□ -1.42
CTNNA1-216ENST00000519489 MVB12BQ9H7P6 319 aa6.2□□□□□ -1.42
CTNNA1-216ENST00000519489 MKKSQ9NPJ1 570 aaPredicted RBP6.2□□□□□ -1.42
CTNNA1-216ENST00000519489 STAU2Q9NUL3 570 aaKnown RBP eCLIP6.2□□□□□ -1.42
CTNNA1-216ENST00000519489 INTUQ9ULD6 942 aa6.2□□□□□ -1.42
CTNNA1-216ENST00000519489 RPL26L1Q9UNX3 145 aaKnown RBP6.2□□□□□ -1.42
CTNNA1-216ENST00000519489 ZNF711Q9Y462 761 aa6.2□□□□□ -1.42
CTNNA1-216ENST00000519489 HEBP2Q9Y5Z4 205 aa6.2□□□□□ -1.42
CTNNA1-216ENST00000519489 SCINQ9Y6U3 715 aa6.2□□□□□ -1.42
CTNNA1-216ENST00000519489 PRR14LQ5THK1 2151 aa6.2□□□□□ -1.42
CTNNA1-216ENST00000519489 KIAA1109Q2LD37 5005 aa6.2□□□□□ -1.42
CTNNA1-216ENST00000519489 ARHGAP21Q5T5U3 1957 aa6.19□□□□□ -1.42
CTNNA1-216ENST00000519489 A0A0J9YVX5 310 aa6.19□□□□□ -1.42
CTNNA1-216ENST00000519489 A0A0U1RQJ8 604 aa6.19□□□□□ -1.42
CTNNA1-216ENST00000519489 HMX2A2RU54 273 aa6.19□□□□□ -1.42
CTNNA1-216ENST00000519489 MEGF11A6BM72 1044 aa6.19□□□□□ -1.42
CTNNA1-216ENST00000519489 SOWAHDA6NJG2 315 aa6.19□□□□□ -1.42
CTNNA1-216ENST00000519489 EEF2KO00418 725 aaKnown RBP6.19□□□□□ -1.42
CTNNA1-216ENST00000519489 PIN1P1O15428 100 aa6.19□□□□□ -1.42
CTNNA1-216ENST00000519489 EIF2S1P05198 315 aaKnown RBP6.19□□□□□ -1.42
CTNNA1-216ENST00000519489 SLC9A1P19634 815 aa6.19□□□□□ -1.42
CTNNA1-216ENST00000519489 HNF1AP20823 631 aa6.19□□□□□ -1.42
CTNNA1-216ENST00000519489 DNASE1L1P49184 302 aa6.19□□□□□ -1.42
CTNNA1-216ENST00000519489 CCR8P51685 355 aa6.19□□□□□ -1.42
CTNNA1-216ENST00000519489 ARFIP2P53365 341 aa6.19□□□□□ -1.42
CTNNA1-216ENST00000519489 SNX16P57768 344 aa6.19□□□□□ -1.42
CTNNA1-216ENST00000519489 NOMO3P69849 1222 aa6.19□□□□□ -1.42
CTNNA1-216ENST00000519489 OGDHQ02218 1023 aa6.19□□□□□ -1.42
CTNNA1-216ENST00000519489 SRSF4Q08170 494 aaKnown RBP6.19□□□□□ -1.42
CTNNA1-216ENST00000519489 LGALS3BPQ08380 585 aa6.19□□□□□ -1.42
CTNNA1-216ENST00000519489 ITKQ08881 620 aa6.19□□□□□ -1.42
CTNNA1-216ENST00000519489 PTP4A2Q12974 167 aa6.19□□□□□ -1.42
CTNNA1-216ENST00000519489 HKDC1Q2TB90 917 aa6.19□□□□□ -1.42
CTNNA1-216ENST00000519489 BCL7AQ4VC05 210 aa6.19□□□□□ -1.42
CTNNA1-216ENST00000519489 TAF3Q5VWG9 929 aa6.19□□□□□ -1.42
CTNNA1-216ENST00000519489 NSUN5P2Q63ZY6 315 aa6.19□□□□□ -1.42
CTNNA1-216ENST00000519489 SEZ6L2Q6UXD5 910 aa6.19□□□□□ -1.42
CTNNA1-216ENST00000519489 PRSS41Q7RTY9 318 aa6.19□□□□□ -1.42
CTNNA1-216ENST00000519489 SLC22A16Q86VW1 577 aa6.19□□□□□ -1.42
CTNNA1-216ENST00000519489 TMEM35BQ8NCS4 154 aa6.19□□□□□ -1.42
CTNNA1-216ENST00000519489 NFAM1Q8NET5 270 aaPredicted RBP6.19□□□□□ -1.42
CTNNA1-216ENST00000519489 BRSK1Q8TDC3 778 aa6.19□□□□□ -1.42
CTNNA1-216ENST00000519489 TFGQ92734 400 aaPredicted RBP6.19□□□□□ -1.42
CTNNA1-216ENST00000519489 HTRA1Q92743 480 aa6.19□□□□□ -1.42
CTNNA1-216ENST00000519489 TAF15Q92804 592 aaKnown RBP eCLIP6.19□□□□□ -1.42
CTNNA1-216ENST00000519489 MMABQ96EY8 250 aaPredicted RBP6.19□□□□□ -1.42
CTNNA1-216ENST00000519489 TRMT61AQ96FX7 289 aaKnown RBP6.19□□□□□ -1.42
CTNNA1-216ENST00000519489 IL17FQ96PD4 163 aa6.19□□□□□ -1.42
CTNNA1-216ENST00000519489 COG4Q9H9E3 785 aa6.19□□□□□ -1.42
CTNNA1-216ENST00000519489 TUBA8Q9NY65 449 aaPredicted RBP6.19□□□□□ -1.42
CTNNA1-216ENST00000519489 CWC15Q9P013 229 aaKnown RBP6.19□□□□□ -1.42
CTNNA1-216ENST00000519489 CIDEBQ9UHD4 219 aa6.19□□□□□ -1.42
CTNNA1-216ENST00000519489 PCDHA7Q9UN72 937 aa6.19□□□□□ -1.42
CTNNA1-216ENST00000519489 PCDHGB3Q9Y5G1 929 aa6.19□□□□□ -1.42
CTNNA1-216ENST00000519489 DUSP10Q9Y6W6 482 aa6.19□□□□□ -1.42
CTNNA1-216ENST00000519489 A0A0A6YYJ9 748 aa6.18□□□□□ -1.42
CTNNA1-216ENST00000519489 LRRC14BA6NHZ5 514 aa6.18□□□□□ -1.42
CTNNA1-216ENST00000519489 SLCO1B7G3V0H7 640 aa6.18□□□□□ -1.42
CTNNA1-216ENST00000519489 ACOT7O00154 380 aa6.18□□□□□ -1.42
CTNNA1-216ENST00000519489 P4HA2O15460 535 aa6.18□□□□□ -1.42
CTNNA1-216ENST00000519489 PRKNO60260 465 aaPredicted RBP6.18□□□□□ -1.42
CTNNA1-216ENST00000519489 HCN1O60741 890 aa6.18□□□□□ -1.42
CTNNA1-216ENST00000519489 TUBB4AP04350 444 aa6.18□□□□□ -1.42
CTNNA1-216ENST00000519489 HLA-DQB2P05538 268 aa6.18□□□□□ -1.42
CTNNA1-216ENST00000519489 PTNP21246 168 aa6.18□□□□□ -1.42
CTNNA1-216ENST00000519489 SHMT2P34897 504 aa6.18□□□□□ -1.42
CTNNA1-216ENST00000519489 CPA2P48052 419 aa6.18□□□□□ -1.42
CTNNA1-216ENST00000519489 TRPC1P48995 793 aa6.18□□□□□ -1.42
CTNNA1-216ENST00000519489 RHAGQ02094 409 aa6.18□□□□□ -1.42
CTNNA1-216ENST00000519489 CRYZQ08257 329 aaKnown RBP6.18□□□□□ -1.42
CTNNA1-216ENST00000519489 FAPQ12884 760 aa6.18□□□□□ -1.42
CTNNA1-216ENST00000519489 GRB7Q14451 532 aa6.18□□□□□ -1.42
CTNNA1-216ENST00000519489 PTPRCAPQ14761 206 aa6.18□□□□□ -1.42
CTNNA1-216ENST00000519489 KIR2DS3Q14952 304 aa6.18□□□□□ -1.42
CTNNA1-216ENST00000519489 NOMO1Q15155 1222 aa6.18□□□□□ -1.42
CTNNA1-216ENST00000519489 MAN2A1Q16706 1144 aa6.18□□□□□ -1.42
CTNNA1-216ENST00000519489 MUM1Q2TAK8 710 aa6.18□□□□□ -1.42
CTNNA1-216ENST00000519489 PGGHGQ32M88 737 aa6.18□□□□□ -1.42
CTNNA1-216ENST00000519489 ZNF750Q32MQ0 723 aa6.18□□□□□ -1.42
CTNNA1-216ENST00000519489 C8orf34Q49A92 452 aa6.18□□□□□ -1.42
CTNNA1-216ENST00000519489 MINDY4Q4G0A6 757 aa6.18□□□□□ -1.42
CTNNA1-216ENST00000519489 XKR6Q5GH73 641 aa6.18□□□□□ -1.42
CTNNA1-216ENST00000519489 DCST1Q5T197 706 aa6.18□□□□□ -1.42
CTNNA1-216ENST00000519489 NAA35Q5VZE5 725 aa6.18□□□□□ -1.42
CTNNA1-216ENST00000519489 RESP18Q5W5W9 173 aa6.18□□□□□ -1.42
CTNNA1-216ENST00000519489 ZNF474Q6S9Z5 364 aaPredicted RBP6.18□□□□□ -1.42
CTNNA1-216ENST00000519489 FAM151BQ6UXP7 276 aa6.18□□□□□ -1.42
CTNNA1-216ENST00000519489 RGS9BPQ6ZS82 235 aa6.18□□□□□ -1.42
CTNNA1-216ENST00000519489 TAX1BP1Q86VP1 789 aa6.18□□□□□ -1.42
CTNNA1-216ENST00000519489 ZNF525Q8N782 197 aa6.18□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms