RNA–Protein interactions for RNA: ENST00000517578.1

HMGB1P19-201, Transcript of high mobility group box 1 pseudogene 19, humanhuman

BASIC

Gene HMGB1P19, Length 577 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P19-201ENST00000517578 EIF2AK1Q9BQI3 630 aaKnown RBP4.65□□□□□ -1.67
HMGB1P19-201ENST00000517578 FEM1AQ9BSK4 669 aa4.65□□□□□ -1.67
HMGB1P19-201ENST00000517578 INPP5KQ9BT40 448 aa4.65□□□□□ -1.67
HMGB1P19-201ENST00000517578 NAT9Q9BTE0 207 aa4.65□□□□□ -1.67
HMGB1P19-201ENST00000517578 ERVK-6Q9BXR3 956 aa4.65□□□□□ -1.67
HMGB1P19-201ENST00000517578 PPIL3Q9H2H8 161 aaKnown RBP4.65□□□□□ -1.67
HMGB1P19-201ENST00000517578 NKX2-4Q9H2Z4 354 aa4.65□□□□□ -1.67
HMGB1P19-201ENST00000517578 TMPRSS5Q9H3S3 457 aa4.65□□□□□ -1.67
HMGB1P19-201ENST00000517578 KANSL2Q9H9L4 492 aa4.65□□□□□ -1.67
HMGB1P19-201ENST00000517578 GLOD4Q9HC38 313 aa4.65□□□□□ -1.67
HMGB1P19-201ENST00000517578 AGPAT4Q9NRZ5 378 aa4.65□□□□□ -1.67
HMGB1P19-201ENST00000517578 TRMT13Q9NUP7 481 aaKnown RBP4.65□□□□□ -1.67
HMGB1P19-201ENST00000517578 STOX2Q9P2F5 926 aaPredicted RBP4.65□□□□□ -1.67
HMGB1P19-201ENST00000517578 ARHGAP28Q9P2N2 729 aa4.65□□□□□ -1.67
HMGB1P19-201ENST00000517578 XPR1Q9UBH6 696 aa4.65□□□□□ -1.67
HMGB1P19-201ENST00000517578 OPTCQ9UBM4 332 aa4.65□□□□□ -1.67
HMGB1P19-201ENST00000517578 SLC23A1Q9UHI7 598 aa4.65□□□□□ -1.67
HMGB1P19-201ENST00000517578 NUFIP1Q9UHK0 495 aaKnown RBP4.65□□□□□ -1.67
HMGB1P19-201ENST00000517578 TP53TG5Q9Y2B4 290 aa4.65□□□□□ -1.67
HMGB1P19-201ENST00000517578 CA5BQ9Y2D0 317 aa4.65□□□□□ -1.67
HMGB1P19-201ENST00000517578 ALG5Q9Y673 324 aa4.65□□□□□ -1.67
HMGB1P19-201ENST00000517578 TRPM3Q9HCF6 1732 aaPredicted RBP4.65□□□□□ -1.67
HMGB1P19-201ENST00000517578 SLIT1O75093 1534 aa4.65□□□□□ -1.67
HMGB1P19-201ENST00000517578 TULP4Q9NRJ4 1543 aa4.65□□□□□ -1.67
HMGB1P19-201ENST00000517578 SPATA31A6Q5VVP1 1343 aa4.65□□□□□ -1.67
HMGB1P19-201ENST00000517578 TMEM2Q9UHN6 1383 aa4.65□□□□□ -1.67
HMGB1P19-201ENST00000517578 CDK5RAP2Q96SN8 1893 aa4.64□□□□□ -1.67
HMGB1P19-201ENST00000517578 KIF1AQ12756 1690 aa4.64□□□□□ -1.67
HMGB1P19-201ENST00000517578 CHD4Q14839 1912 aa4.64□□□□□ -1.67
HMGB1P19-201ENST00000517578 LAMB1P07942 1786 aa4.64□□□□□ -1.67
HMGB1P19-201ENST00000517578 TRBV23OR9-2A0A075B6M9 112 aa4.64□□□□□ -1.67
HMGB1P19-201ENST00000517578 A0A1B0GTW7 788 aa4.64□□□□□ -1.67
HMGB1P19-201ENST00000517578 ASB14A6NK59 587 aa4.64□□□□□ -1.67
HMGB1P19-201ENST00000517578 RFPL4AA6NLU0 287 aa4.64□□□□□ -1.67
HMGB1P19-201ENST00000517578 RFPL4AL1F8VTS6 287 aa4.64□□□□□ -1.67
HMGB1P19-201ENST00000517578 TMX2-CTNND1H3BSU7 103 aa4.64□□□□□ -1.67
HMGB1P19-201ENST00000517578 AGRPO00253 132 aa4.64□□□□□ -1.67
HMGB1P19-201ENST00000517578 POLRMTO00411 1230 aaKnown RBP4.64□□□□□ -1.67
HMGB1P19-201ENST00000517578 PDXKO00764 312 aa4.64□□□□□ -1.67
HMGB1P19-201ENST00000517578 DLGAP1O14490 977 aa4.64□□□□□ -1.67
HMGB1P19-201ENST00000517578 B4GAT1O43505 415 aa4.64□□□□□ -1.67
HMGB1P19-201ENST00000517578 AIREO43918 545 aa4.64□□□□□ -1.67
HMGB1P19-201ENST00000517578 PLIN3O60664 434 aa4.64□□□□□ -1.67
HMGB1P19-201ENST00000517578 HCN1O60741 890 aa4.64□□□□□ -1.67
HMGB1P19-201ENST00000517578 PPP1R11O60927 126 aaPredicted RBP4.64□□□□□ -1.67
HMGB1P19-201ENST00000517578 ULK1O75385 1050 aa4.64□□□□□ -1.67
HMGB1P19-201ENST00000517578 TULP3O75386 442 aa4.64□□□□□ -1.67
HMGB1P19-201ENST00000517578 RAD17O75943 681 aa4.64□□□□□ -1.67
HMGB1P19-201ENST00000517578 DDNO94850 711 aaPredicted RBP4.64□□□□□ -1.67
HMGB1P19-201ENST00000517578 CNOT4O95628 575 aaKnown RBP4.64□□□□□ -1.67
HMGB1P19-201ENST00000517578 FTLP02792 175 aaPredicted RBP4.64□□□□□ -1.67
HMGB1P19-201ENST00000517578 RLN2P04090 185 aa4.64□□□□□ -1.67
HMGB1P19-201ENST00000517578 PCCAP05165 728 aaPredicted RBP4.64□□□□□ -1.67
HMGB1P19-201ENST00000517578 ALPLP05186 524 aa4.64□□□□□ -1.67
HMGB1P19-201ENST00000517578 RPLP0P05388 317 aaKnown RBP4.64□□□□□ -1.67
HMGB1P19-201ENST00000517578 POLBP06746 335 aa4.64□□□□□ -1.67
HMGB1P19-201ENST00000517578 APRTP07741 180 aa4.64□□□□□ -1.67
HMGB1P19-201ENST00000517578 THRBP10828 461 aa4.64□□□□□ -1.67
HMGB1P19-201ENST00000517578 PEPDP12955 493 aa4.64□□□□□ -1.67
HMGB1P19-201ENST00000517578 FOLR2P14207 255 aa4.64□□□□□ -1.67
HMGB1P19-201ENST00000517578 DAOP14920 347 aa4.64□□□□□ -1.67
HMGB1P19-201ENST00000517578 NELFEP18615 380 aaKnown RBP4.64□□□□□ -1.67
HMGB1P19-201ENST00000517578 POU3F3P20264 500 aaPredicted RBP4.64□□□□□ -1.67
HMGB1P19-201ENST00000517578 CHRM3P20309 590 aa4.64□□□□□ -1.67
HMGB1P19-201ENST00000517578 RAB3BP20337 219 aa4.64□□□□□ -1.67
HMGB1P19-201ENST00000517578 RPS3P23396 243 aaKnown RBP eCLIP4.64□□□□□ -1.67
HMGB1P19-201ENST00000517578 ATP5A1P25705 553 aaKnown RBP4.64□□□□□ -1.67
HMGB1P19-201ENST00000517578 ACVR2AP27037 513 aa4.64□□□□□ -1.67
HMGB1P19-201ENST00000517578 ADORA2AP29274 412 aa4.64□□□□□ -1.67
HMGB1P19-201ENST00000517578 GDI1P31150 447 aa4.64□□□□□ -1.67
HMGB1P19-201ENST00000517578 RPL22P35268 128 aaKnown RBP4.64□□□□□ -1.67
HMGB1P19-201ENST00000517578 SPRP35270 261 aaPredicted RBP4.64□□□□□ -1.67
HMGB1P19-201ENST00000517578 GGT5P36269 586 aa4.64□□□□□ -1.67
HMGB1P19-201ENST00000517578 GPX4P36969 197 aaPredicted RBP4.64□□□□□ -1.67
HMGB1P19-201ENST00000517578 IL15P40933 162 aaPredicted RBP4.64□□□□□ -1.67
HMGB1P19-201ENST00000517578 PIK3CBP42338 1070 aa4.64□□□□□ -1.67
HMGB1P19-201ENST00000517578 TGM4P49221 684 aa4.64□□□□□ -1.67
HMGB1P19-201ENST00000517578 RBP2P50120 134 aa4.64□□□□□ -1.67
HMGB1P19-201ENST00000517578 RAB5CP51148 216 aa4.64□□□□□ -1.67
HMGB1P19-201ENST00000517578 SLURP1P55000 103 aa4.64□□□□□ -1.67
HMGB1P19-201ENST00000517578 MRPS5P82675 430 aaKnown RBP4.64□□□□□ -1.67
HMGB1P19-201ENST00000517578 ZNF155Q12901 538 aaPredicted RBP4.64□□□□□ -1.67
HMGB1P19-201ENST00000517578 SLC9A5Q14940 896 aa4.64□□□□□ -1.67
HMGB1P19-201ENST00000517578 SF1Q15637 639 aaKnown RBP4.64□□□□□ -1.67
HMGB1P19-201ENST00000517578 TOMM34Q15785 309 aaPredicted RBP4.64□□□□□ -1.67
HMGB1P19-201ENST00000517578 ETFDHQ16134 617 aa4.64□□□□□ -1.67
HMGB1P19-201ENST00000517578 SLC10A6Q3KNW5 377 aa4.64□□□□□ -1.67
HMGB1P19-201ENST00000517578 ZACNQ401N2 412 aa4.64□□□□□ -1.67
HMGB1P19-201ENST00000517578 ATP13A4Q4VNC1 1196 aa4.64□□□□□ -1.67
HMGB1P19-201ENST00000517578 FAM98BQ52LJ0 330 aaKnown RBP4.64□□□□□ -1.67
HMGB1P19-201ENST00000517578 FASTKD1Q53R41 847 aaKnown RBP4.64□□□□□ -1.67
HMGB1P19-201ENST00000517578 FAM26FQ5R3K3 315 aa4.64□□□□□ -1.67
HMGB1P19-201ENST00000517578 LCN1P1Q5VSP4 162 aa4.64□□□□□ -1.67
HMGB1P19-201ENST00000517578 AFMIDQ63HM1 303 aa4.64□□□□□ -1.67
HMGB1P19-201ENST00000517578 ANKS6Q68DC2 871 aa4.64□□□□□ -1.67
HMGB1P19-201ENST00000517578 IL31Q6EBC2 164 aa4.64□□□□□ -1.67
HMGB1P19-201ENST00000517578 ACAD10Q6JQN1 1059 aa4.64□□□□□ -1.67
HMGB1P19-201ENST00000517578 LRRC8EQ6NSJ5 796 aa4.64□□□□□ -1.67
HMGB1P19-201ENST00000517578 ANKRD54Q6NXT1 300 aa4.64□□□□□ -1.67
HMGB1P19-201ENST00000517578 NOTUMQ6P988 496 aa4.64□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 68.3 ms