RNA–Protein interactions for RNA: ENST00000517514.1

CLN8-202, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

TSL 4

Gene CLN8, Length 568 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-202ENST00000517514 GABREP78334 506 aa9.41□□□□□ -0.9
CLN8-202ENST00000517514 IL11RAQ14626 422 aa9.41□□□□□ -0.9
CLN8-202ENST00000517514 RTP5Q14D33 572 aa9.41□□□□□ -0.9
CLN8-202ENST00000517514 LARP7Q4G0J3 582 aaKnown RBP eCLIP9.41□□□□□ -0.9
CLN8-202ENST00000517514 SGO1Q5FBB7 561 aa9.41□□□□□ -0.9
CLN8-202ENST00000517514 PAGE2BQ5JRK9 111 aa9.41□□□□□ -0.9
CLN8-202ENST00000517514 SH2D4BQ5SQS7 431 aa9.41□□□□□ -0.9
CLN8-202ENST00000517514 FRG2Q64ET8 278 aa9.41□□□□□ -0.9
CLN8-202ENST00000517514 TTC19Q6DKK2 380 aaPredicted RBP9.41□□□□□ -0.9
CLN8-202ENST00000517514 LCN10Q6JVE6 187 aa9.41□□□□□ -0.9
CLN8-202ENST00000517514 FOXR1Q6PIV2 292 aa9.41□□□□□ -0.9
CLN8-202ENST00000517514 IGF2-ASQ6U949 168 aa9.41□□□□□ -0.9
CLN8-202ENST00000517514 TIPARPQ7Z3E1 657 aaKnown RBP9.41□□□□□ -0.9
CLN8-202ENST00000517514 MAVSQ7Z434 540 aa9.41□□□□□ -0.9
CLN8-202ENST00000517514 PDSS2Q86YH6 399 aa9.41□□□□□ -0.9
CLN8-202ENST00000517514 TMEM151BQ8IW70 566 aa9.41□□□□□ -0.9
CLN8-202ENST00000517514 AFAP1L2Q8N4X5 818 aa9.41□□□□□ -0.9
CLN8-202ENST00000517514 AMER3Q8N944 861 aa9.41□□□□□ -0.9
CLN8-202ENST00000517514 OR2T11Q8NH01 316 aa9.41□□□□□ -0.9
CLN8-202ENST00000517514 METTL6Q8TCB7 284 aa9.41□□□□□ -0.9
CLN8-202ENST00000517514 AGR3Q8TD06 166 aa9.41□□□□□ -0.9
CLN8-202ENST00000517514 MS4A6EQ96DS6 147 aa9.41□□□□□ -0.9
CLN8-202ENST00000517514 C3orf30Q96M34 536 aa9.41□□□□□ -0.9
CLN8-202ENST00000517514 MAGEB18Q96M61 343 aa9.41□□□□□ -0.9
CLN8-202ENST00000517514 SLC46A1Q96NT5 459 aa9.41□□□□□ -0.9
CLN8-202ENST00000517514 QRFPRQ96P65 431 aa9.41□□□□□ -0.9
CLN8-202ENST00000517514 FRG2BQ96QU4 278 aa9.41□□□□□ -0.9
CLN8-202ENST00000517514 F2RL3Q96RI0 385 aa9.41□□□□□ -0.9
CLN8-202ENST00000517514 TAAR9Q96RI9 348 aa9.41□□□□□ -0.9
CLN8-202ENST00000517514 DDA1Q9BW61 102 aa9.41□□□□□ -0.9
CLN8-202ENST00000517514 ZNF717Q9BY31 904 aaPredicted RBP9.41□□□□□ -0.9
CLN8-202ENST00000517514 OR51B5Q9H339 312 aa9.41□□□□□ -0.9
CLN8-202ENST00000517514 RARRES3Q9UL19 164 aa9.41□□□□□ -0.9
CLN8-202ENST00000517514 PPT2Q9UMR5 302 aa9.41□□□□□ -0.9
CLN8-202ENST00000517514 STK38LQ9Y2H1 464 aa9.41□□□□□ -0.9
CLN8-202ENST00000517514 EPB41L3Q9Y2J2 1087 aaPredicted RBP9.41□□□□□ -0.9
CLN8-202ENST00000517514 RAP2CQ9Y3L5 183 aa9.41□□□□□ -0.9
CLN8-202ENST00000517514 TRAF6Q9Y4K3 522 aa9.41□□□□□ -0.9
CLN8-202ENST00000517514 DNAJC15Q9Y5T4 150 aa9.41□□□□□ -0.9
CLN8-202ENST00000517514 NUP210LQ5VU65 1888 aa9.4□□□□□ -0.9
CLN8-202ENST00000517514 CEP295Q9C0D2 2601 aa9.4□□□□□ -0.9
CLN8-202ENST00000517514 TEX51A0A1B0GUA7 166 aa9.4□□□□□ -0.9
CLN8-202ENST00000517514 MED19A0JLT2 244 aaPredicted RBP9.4□□□□□ -0.9
CLN8-202ENST00000517514 HYKKA2RU49 373 aa9.4□□□□□ -0.9
CLN8-202ENST00000517514 ANKDD1BA6NHY2 528 aa9.4□□□□□ -0.9
CLN8-202ENST00000517514 FOXE1O00358 373 aaPredicted RBP9.4□□□□□ -0.9
CLN8-202ENST00000517514 POLR1CO15160 346 aaPredicted RBP9.4□□□□□ -0.9
CLN8-202ENST00000517514 ZSCAN9O15535 394 aaPredicted RBP9.4□□□□□ -0.9
CLN8-202ENST00000517514 NDUFS4O43181 175 aa9.4□□□□□ -0.9
CLN8-202ENST00000517514 OR2B3O76000 313 aa9.4□□□□□ -0.9
CLN8-202ENST00000517514 DXOO77932 396 aaKnown RBP9.4□□□□□ -0.9
CLN8-202ENST00000517514 TNFSF15O95150 251 aa9.4□□□□□ -0.9
CLN8-202ENST00000517514 HSPA4LO95757 839 aa9.4□□□□□ -0.9
CLN8-202ENST00000517514 DLGAP3O95886 979 aa9.4□□□□□ -0.9
CLN8-202ENST00000517514 TGFB1P01137 390 aa9.4□□□□□ -0.9
CLN8-202ENST00000517514 NTRK1P04629 796 aa9.4□□□□□ -0.9
CLN8-202ENST00000517514 CAPNS1P04632 268 aa9.4□□□□□ -0.9
CLN8-202ENST00000517514 SERPINA6P08185 405 aa9.4□□□□□ -0.9
CLN8-202ENST00000517514 UROSP10746 265 aa9.4□□□□□ -0.9
CLN8-202ENST00000517514 RORAP35398 523 aa9.4□□□□□ -0.9
CLN8-202ENST00000517514 ARL1P40616 181 aaPredicted RBP9.4□□□□□ -0.9
CLN8-202ENST00000517514 EMP3P54852 163 aa9.4□□□□□ -0.9
CLN8-202ENST00000517514 GPS2Q13227 327 aa9.4□□□□□ -0.9
CLN8-202ENST00000517514 PWP1Q13610 501 aa9.4□□□□□ -0.9
CLN8-202ENST00000517514 DDX39BQ13838 428 aaKnown RBP9.4□□□□□ -0.9
CLN8-202ENST00000517514 HIST2H2ACQ16777 129 aaPredicted RBP9.4□□□□□ -0.9
CLN8-202ENST00000517514 XKR7Q5GH72 579 aa9.4□□□□□ -0.9
CLN8-202ENST00000517514 TOR1AIP1Q5JTV8 583 aa9.4□□□□□ -0.9
CLN8-202ENST00000517514 TCTE1Q5JU00 501 aa9.4□□□□□ -0.9
CLN8-202ENST00000517514 DEPDC1Q5TB30 811 aa9.4□□□□□ -0.9
CLN8-202ENST00000517514 ATG16L1Q676U5 607 aa9.4□□□□□ -0.9
CLN8-202ENST00000517514 HIST2H2AA3Q6FI13 130 aa9.4□□□□□ -0.9
CLN8-202ENST00000517514 ZNF793Q6ZN11 406 aa9.4□□□□□ -0.9
CLN8-202ENST00000517514 RNF165Q6ZSG1 346 aa9.4□□□□□ -0.9
CLN8-202ENST00000517514 Q6ZSR9 355 aa9.4□□□□□ -0.9
CLN8-202ENST00000517514 TRIM46Q7Z4K8 759 aa9.4□□□□□ -0.9
CLN8-202ENST00000517514 PPP1R3BQ86XI6 285 aa9.4□□□□□ -0.9
CLN8-202ENST00000517514 TRIM42Q8IWZ5 723 aa9.4□□□□□ -0.9
CLN8-202ENST00000517514 CLYBLQ8N0X4 340 aa9.4□□□□□ -0.9
CLN8-202ENST00000517514 ARFGAP2Q8N6H7 521 aa9.4□□□□□ -0.9
CLN8-202ENST00000517514 CAMKVQ8NCB2 501 aa9.4□□□□□ -0.9
CLN8-202ENST00000517514 TRPV3Q8NET8 790 aa9.4□□□□□ -0.9
CLN8-202ENST00000517514 TTLQ8NG68 377 aa9.4□□□□□ -0.9
CLN8-202ENST00000517514 OR8K5Q8NH50 307 aa9.4□□□□□ -0.9
CLN8-202ENST00000517514 PPP1R14CQ8TAE6 165 aa9.4□□□□□ -0.9
CLN8-202ENST00000517514 FAM76AQ8TAV0 307 aa9.4□□□□□ -0.9
CLN8-202ENST00000517514 UTP15Q8TED0 518 aaKnown RBP9.4□□□□□ -0.9
CLN8-202ENST00000517514 ZDHHC19Q8WVZ1 309 aaPredicted RBP9.4□□□□□ -0.9
CLN8-202ENST00000517514 C11orf24Q96F05 449 aaPredicted RBP9.4□□□□□ -0.9
CLN8-202ENST00000517514 SEC16BQ96JE7 1060 aa9.4□□□□□ -0.9
CLN8-202ENST00000517514 SORBS1Q9BX66 1292 aaKnown RBP9.4□□□□□ -0.9
CLN8-202ENST00000517514 TMEM121BQ9BXQ6 578 aaPredicted RBP9.4□□□□□ -0.9
CLN8-202ENST00000517514 ACPTQ9BZG2 426 aa9.4□□□□□ -0.9
CLN8-202ENST00000517514 NRSN2Q9GZP1 204 aa9.4□□□□□ -0.9
CLN8-202ENST00000517514 CCDC134Q9H6E4 229 aa9.4□□□□□ -0.9
CLN8-202ENST00000517514 PRDM7Q9NQW5 492 aa9.4□□□□□ -0.9
CLN8-202ENST00000517514 SLC22A11Q9NSA0 550 aa9.4□□□□□ -0.9
CLN8-202ENST00000517514 THAP1Q9NVV9 213 aa9.4□□□□□ -0.9
CLN8-202ENST00000517514 PSD3Q9NYI0 1048 aa9.4□□□□□ -0.9
CLN8-202ENST00000517514 DHCR7Q9UBM7 475 aaKnown RBP9.4□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms