RNA–Protein interactions for RNA: ENST00000516680.1

RNU6-197P-201, Transcript of RNA, U6 small nuclear 197, pseudogene, humanhuman

BASIC

Gene RNU6-197P, Length 100 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-197P-201ENST00000516680 K7EQG2 157 aa0.91□□□□□ -2.26
RNU6-197P-201ENST00000516680 DDX39AO00148 427 aaKnown RBP0.91□□□□□ -2.26
RNU6-197P-201ENST00000516680 VILLO15195 856 aa0.91□□□□□ -2.26
RNU6-197P-201ENST00000516680 IPO8O15397 1037 aaKnown RBP0.91□□□□□ -2.26
RNU6-197P-201ENST00000516680 TXNL1O43396 289 aa0.91□□□□□ -2.26
RNU6-197P-201ENST00000516680 HTATSF1O43719 755 aaKnown RBP0.91□□□□□ -2.26
RNU6-197P-201ENST00000516680 STX6O43752 255 aa0.91□□□□□ -2.26
RNU6-197P-201ENST00000516680 PRAMEF11O60813 436 aa0.91□□□□□ -2.26
RNU6-197P-201ENST00000516680 PTP4A3O75365 173 aa0.91□□□□□ -2.26
RNU6-197P-201ENST00000516680 FOXH1O75593 365 aa0.91□□□□□ -2.26
RNU6-197P-201ENST00000516680 BEST1O76090 585 aa0.91□□□□□ -2.26
RNU6-197P-201ENST00000516680 MT-ND1P03886 318 aa0.91□□□□□ -2.26
RNU6-197P-201ENST00000516680 RB1P06400 928 aa0.91□□□□□ -2.26
RNU6-197P-201ENST00000516680 ATP5BP06576 529 aaKnown RBP0.91□□□□□ -2.26
RNU6-197P-201ENST00000516680 TPM2P07951 284 aa0.91□□□□□ -2.26
RNU6-197P-201ENST00000516680 QDPRP09417 244 aa0.91□□□□□ -2.26
RNU6-197P-201ENST00000516680 CCDC175P0C221 793 aa0.91□□□□□ -2.26
RNU6-197P-201ENST00000516680 SUPT20HL2P0C7V6 817 aa0.91□□□□□ -2.26
RNU6-197P-201ENST00000516680 MYBL1P10243 752 aa0.91□□□□□ -2.26
RNU6-197P-201ENST00000516680 UMPSP11172 480 aa0.91□□□□□ -2.26
RNU6-197P-201ENST00000516680 VPREB1P12018 145 aa0.91□□□□□ -2.26
RNU6-197P-201ENST00000516680 LAMP2P13473 410 aa0.91□□□□□ -2.26
RNU6-197P-201ENST00000516680 EEF2P13639 858 aaKnown RBP0.91□□□□□ -2.26
RNU6-197P-201ENST00000516680 GLULP15104 373 aa0.91□□□□□ -2.26
RNU6-197P-201ENST00000516680 HLA-DPA1P20036 260 aa0.91□□□□□ -2.26
RNU6-197P-201ENST00000516680 CD27P26842 260 aa0.91□□□□□ -2.26
RNU6-197P-201ENST00000516680 GCH1P30793 250 aa0.91□□□□□ -2.26
RNU6-197P-201ENST00000516680 HOXD13P35453 343 aa0.91□□□□□ -2.26
RNU6-197P-201ENST00000516680 MATKP42679 507 aa0.91□□□□□ -2.26
RNU6-197P-201ENST00000516680 SLC9A3P48764 834 aa0.91□□□□□ -2.26
RNU6-197P-201ENST00000516680 LIG4P49917 911 aa0.91□□□□□ -2.26
RNU6-197P-201ENST00000516680 MRPL12P52815 198 aaKnown RBP0.91□□□□□ -2.26
RNU6-197P-201ENST00000516680 CDH8P55286 799 aa0.91□□□□□ -2.26
RNU6-197P-201ENST00000516680 SRPXP78539 464 aa0.91□□□□□ -2.26
RNU6-197P-201ENST00000516680 HMGN5P82970 282 aaKnown RBP0.91□□□□□ -2.26
RNU6-197P-201ENST00000516680 RBP5P82980 135 aa0.91□□□□□ -2.26
RNU6-197P-201ENST00000516680 YWHAHQ04917 246 aaPredicted RBP0.91□□□□□ -2.26
RNU6-197P-201ENST00000516680 CKAP4Q07065 602 aaKnown RBP0.91□□□□□ -2.26
RNU6-197P-201ENST00000516680 CXCL9Q07325 125 aa0.91□□□□□ -2.26
RNU6-197P-201ENST00000516680 SCN1BQ07699 218 aa0.91□□□□□ -2.26
RNU6-197P-201ENST00000516680 AIMP1Q12904 312 aaKnown RBP0.91□□□□□ -2.26
RNU6-197P-201ENST00000516680 AIMP2Q13155 320 aaKnown RBP0.91□□□□□ -2.26
RNU6-197P-201ENST00000516680 SRSF9Q13242 221 aaKnown RBP eCLIP0.91□□□□□ -2.26
RNU6-197P-201ENST00000516680 SGCGQ13326 291 aa0.91□□□□□ -2.26
RNU6-197P-201ENST00000516680 PPP2R5CQ13362 524 aa0.91□□□□□ -2.26
RNU6-197P-201ENST00000516680 SCARB2Q14108 478 aa0.91□□□□□ -2.26
RNU6-197P-201ENST00000516680 NTRK2Q16620 822 aa0.91□□□□□ -2.26
RNU6-197P-201ENST00000516680 C2orf76Q3KRA6 126 aa0.91□□□□□ -2.26
RNU6-197P-201ENST00000516680 TIMM50Q3ZCQ8 353 aa0.91□□□□□ -2.26
RNU6-197P-201ENST00000516680 BMP2KLQ5H9B9 411 aa0.91□□□□□ -2.26
RNU6-197P-201ENST00000516680 TCP11X2Q5H9J9 407 aa0.91□□□□□ -2.26
RNU6-197P-201ENST00000516680 PLEKHS1Q5SXH7 462 aa0.91□□□□□ -2.26
RNU6-197P-201ENST00000516680 SNX30Q5VWJ9 437 aa0.91□□□□□ -2.26
RNU6-197P-201ENST00000516680 SHQ1Q6PI26 577 aaKnown RBP0.91□□□□□ -2.26
RNU6-197P-201ENST00000516680 CNSTQ6PJW8 725 aa0.91□□□□□ -2.26
RNU6-197P-201ENST00000516680 PAMR1Q6UXH9 720 aa0.91□□□□□ -2.26
RNU6-197P-201ENST00000516680 TIFABQ6ZNK6 161 aa0.91□□□□□ -2.26
RNU6-197P-201ENST00000516680 Q7L0L9 218 aa0.91□□□□□ -2.26
RNU6-197P-201ENST00000516680 CHST9Q7L1S5 443 aa0.91□□□□□ -2.26
RNU6-197P-201ENST00000516680 CHST3Q7LGC8 479 aa0.91□□□□□ -2.26
RNU6-197P-201ENST00000516680 CATSPER4Q7RTX7 472 aa0.91□□□□□ -2.26
RNU6-197P-201ENST00000516680 CCDC186Q7Z3E2 898 aa0.91□□□□□ -2.26
RNU6-197P-201ENST00000516680 SZRD1Q7Z422 152 aa0.91□□□□□ -2.26
RNU6-197P-201ENST00000516680 DNAJB7Q7Z6W7 309 aaPredicted RBP0.91□□□□□ -2.26
RNU6-197P-201ENST00000516680 SLFN11Q7Z7L1 901 aa0.91□□□□□ -2.26
RNU6-197P-201ENST00000516680 METTL23Q86XA0 190 aa0.91□□□□□ -2.26
RNU6-197P-201ENST00000516680 CEP57Q86XR8 500 aa0.91□□□□□ -2.26
RNU6-197P-201ENST00000516680 DNAAF5Q86Y56 855 aa0.91□□□□□ -2.26
RNU6-197P-201ENST00000516680 OR8H3Q8N146 312 aa0.91□□□□□ -2.26
RNU6-197P-201ENST00000516680 TTC39CQ8N584 583 aa0.91□□□□□ -2.26
RNU6-197P-201ENST00000516680 FAM89BQ8N5H3 189 aa0.91□□□□□ -2.26
RNU6-197P-201ENST00000516680 ARL6IP6Q8N6S5 226 aa0.91□□□□□ -2.26
RNU6-197P-201ENST00000516680 C10orf53Q8N6V4 93 aa0.91□□□□□ -2.26
RNU6-197P-201ENST00000516680 TEX9Q8N6V9 391 aa0.91□□□□□ -2.26
RNU6-197P-201ENST00000516680 ZNF713Q8N859 430 aaPredicted RBP0.91□□□□□ -2.26
RNU6-197P-201ENST00000516680 TDRD5Q8NAT2 981 aaKnown RBP0.91□□□□□ -2.26
RNU6-197P-201ENST00000516680 AVL9Q8NBF6 648 aa0.91□□□□□ -2.26
RNU6-197P-201ENST00000516680 POGLUT1Q8NBL1 392 aa0.91□□□□□ -2.26
RNU6-197P-201ENST00000516680 KCTD6Q8NC69 237 aa0.91□□□□□ -2.26
RNU6-197P-201ENST00000516680 MCUQ8NE86 351 aa0.91□□□□□ -2.26
RNU6-197P-201ENST00000516680 APPL2Q8NEU8 664 aa0.91□□□□□ -2.26
RNU6-197P-201ENST00000516680 PSMA8Q8TAA3 256 aa0.91□□□□□ -2.26
RNU6-197P-201ENST00000516680 GDAP1Q8TB36 358 aa0.91□□□□□ -2.26
RNU6-197P-201ENST00000516680 SETD6Q8TBK2 473 aa0.91□□□□□ -2.26
RNU6-197P-201ENST00000516680 ZNF721Q8TF20 911 aa0.91□□□□□ -2.26
RNU6-197P-201ENST00000516680 USP6NLQ92738 828 aa0.91□□□□□ -2.26
RNU6-197P-201ENST00000516680 FAM162AQ96A26 154 aa0.91□□□□□ -2.26
RNU6-197P-201ENST00000516680 LRRC59Q96AG4 307 aaKnown RBP0.91□□□□□ -2.26
RNU6-197P-201ENST00000516680 SAT2Q96F10 170 aaPredicted RBP0.91□□□□□ -2.26
RNU6-197P-201ENST00000516680 THOC1Q96FV9 657 aaKnown RBP0.91□□□□□ -2.26
RNU6-197P-201ENST00000516680 PKNOX2Q96KN3 472 aa0.91□□□□□ -2.26
RNU6-197P-201ENST00000516680 CCDC114Q96M63 670 aa0.91□□□□□ -2.26
RNU6-197P-201ENST00000516680 TAAR6Q96RI8 345 aa0.91□□□□□ -2.26
RNU6-197P-201ENST00000516680 HNRNPABQ99729 332 aaKnown RBP0.91□□□□□ -2.26
RNU6-197P-201ENST00000516680 CITED2Q99967 270 aaPredicted RBP0.91□□□□□ -2.26
RNU6-197P-201ENST00000516680 MXD3Q9BW11 206 aa0.91□□□□□ -2.26
RNU6-197P-201ENST00000516680 APOL6Q9BWW8 343 aa0.91□□□□□ -2.26
RNU6-197P-201ENST00000516680 MRPL1Q9BYD6 325 aaKnown RBP0.91□□□□□ -2.26
RNU6-197P-201ENST00000516680 XPO4Q9C0E2 1151 aaKnown RBP0.91□□□□□ -2.26
RNU6-197P-201ENST00000516680 MTMR12Q9C0I1 747 aa0.91□□□□□ -2.26
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms