RNA–Protein interactions for RNA: ENST00000515516.1

TCOF1-215, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 5

Gene TCOF1, Length 661 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-215ENST00000515516 JAK1P23458 1154 aa12.9□□□□□ -0.34
TCOF1-215ENST00000515516 AHRP35869 848 aa12.9□□□□□ -0.34
TCOF1-215ENST00000515516 TNFSF10P50591 281 aa12.9□□□□□ -0.34
TCOF1-215ENST00000515516 TAS2R39P59534 338 aa12.9□□□□□ -0.34
TCOF1-215ENST00000515516 MRPS25P82663 173 aaKnown RBP12.9□□□□□ -0.34
TCOF1-215ENST00000515516 CDKL1Q00532 357 aa12.9□□□□□ -0.34
TCOF1-215ENST00000515516 POU4F1Q01851 419 aa12.9□□□□□ -0.34
TCOF1-215ENST00000515516 ZNF33BQ06732 778 aa12.9□□□□□ -0.34
TCOF1-215ENST00000515516 NSDHLQ15738 373 aa12.9□□□□□ -0.34
TCOF1-215ENST00000515516 EXT1Q16394 746 aa12.9□□□□□ -0.34
TCOF1-215ENST00000515516 PLAG1Q6DJT9 500 aa12.9□□□□□ -0.34
TCOF1-215ENST00000515516 NXPE4Q6UWF7 544 aa12.9□□□□□ -0.34
TCOF1-215ENST00000515516 TMEM207Q6UWW9 146 aa12.9□□□□□ -0.34
TCOF1-215ENST00000515516 LANCL3Q6ZV70 420 aa12.9□□□□□ -0.34
TCOF1-215ENST00000515516 ANKRD37Q7Z713 158 aa12.9□□□□□ -0.34
TCOF1-215ENST00000515516 TMPRSS11BQ86T26 416 aa12.9□□□□□ -0.34
TCOF1-215ENST00000515516 ZNF740Q8NDX6 193 aa12.9□□□□□ -0.34
TCOF1-215ENST00000515516 TRPV3Q8NET8 790 aa12.9□□□□□ -0.34
TCOF1-215ENST00000515516 NT5CQ8TCD5 201 aa12.9□□□□□ -0.34
TCOF1-215ENST00000515516 TSPAN17Q96FV3 270 aa12.9□□□□□ -0.34
TCOF1-215ENST00000515516 IMMP1LQ96LU5 166 aa12.9□□□□□ -0.34
TCOF1-215ENST00000515516 ZNF354BQ96LW1 612 aa12.9□□□□□ -0.34
TCOF1-215ENST00000515516 OR1F2PQ96R84 312 aa12.9□□□□□ -0.34
TCOF1-215ENST00000515516 PELI2Q9HAT8 420 aa12.9□□□□□ -0.34
TCOF1-215ENST00000515516 POPDC3Q9HBV1 291 aa12.9□□□□□ -0.34
TCOF1-215ENST00000515516 SAYSD1Q9NPB0 183 aa12.9□□□□□ -0.34
TCOF1-215ENST00000515516 OLAHQ9NV23 265 aa12.9□□□□□ -0.34
TCOF1-215ENST00000515516 ZFP69BQ9UJL9 534 aa12.9□□□□□ -0.34
TCOF1-215ENST00000515516 SLC22A14Q9Y267 594 aa12.9□□□□□ -0.34
TCOF1-215ENST00000515516 UTP11Q9Y3A2 253 aaKnown RBP12.9□□□□□ -0.34
TCOF1-215ENST00000515516 OARD1Q9Y530 152 aa12.9□□□□□ -0.34
TCOF1-215ENST00000515516 FER1L5A0AVI2 2057 aa12.9□□□□□ -0.34
TCOF1-215ENST00000515516 FLNCQ14315 2725 aa12.89□□□□□ -0.35
TCOF1-215ENST00000515516 ZNF860A6NHJ4 632 aa12.89□□□□□ -0.35
TCOF1-215ENST00000515516 PSMD12O00232 456 aaPredicted RBP12.89□□□□□ -0.35
TCOF1-215ENST00000515516 GALR3O60755 368 aaPredicted RBP12.89□□□□□ -0.35
TCOF1-215ENST00000515516 CDC123O75794 336 aaPredicted RBP12.89□□□□□ -0.35
TCOF1-215ENST00000515516 WDPCPO95876 746 aa12.89□□□□□ -0.35
TCOF1-215ENST00000515516 F10P00742 488 aa12.89□□□□□ -0.35
TCOF1-215ENST00000515516 ZNF888P0CJ79 500 aaPredicted RBP12.89□□□□□ -0.35
TCOF1-215ENST00000515516 SCTRP47872 440 aa12.89□□□□□ -0.35
TCOF1-215ENST00000515516 SNRPNP63162 240 aaKnown RBP12.89□□□□□ -0.35
TCOF1-215ENST00000515516 ZNF460Q14592 562 aa12.89□□□□□ -0.35
TCOF1-215ENST00000515516 USP10Q14694 798 aaKnown RBP12.89□□□□□ -0.35
TCOF1-215ENST00000515516 ABRAXAS2Q15018 415 aa12.89□□□□□ -0.35
TCOF1-215ENST00000515516 INAQ16352 499 aa12.89□□□□□ -0.35
TCOF1-215ENST00000515516 PPP1R3AQ16821 1122 aa12.89□□□□□ -0.35
TCOF1-215ENST00000515516 ZXDCQ2QGD7 858 aaPredicted RBP12.89□□□□□ -0.35
TCOF1-215ENST00000515516 DEFB134Q4QY38 66 aa12.89□□□□□ -0.35
TCOF1-215ENST00000515516 PDSS2Q86YH6 399 aa12.89□□□□□ -0.35
TCOF1-215ENST00000515516 AFAP1L2Q8N4X5 818 aa12.89□□□□□ -0.35
TCOF1-215ENST00000515516 PLPP5Q8NEB5 264 aa12.89□□□□□ -0.35
TCOF1-215ENST00000515516 SPATA4Q8NEY3 305 aa12.89□□□□□ -0.35
TCOF1-215ENST00000515516 TBC1D20Q96BZ9 403 aa12.89□□□□□ -0.35
TCOF1-215ENST00000515516 MOCOSQ96EN8 888 aa12.89□□□□□ -0.35
TCOF1-215ENST00000515516 LPAR4Q99677 370 aa12.89□□□□□ -0.35
TCOF1-215ENST00000515516 CAPS2Q9BXY5 557 aa12.89□□□□□ -0.35
TCOF1-215ENST00000515516 RBCK1Q9BYM8 510 aa12.89□□□□□ -0.35
TCOF1-215ENST00000515516 RNF32Q9H0A6 362 aa12.89□□□□□ -0.35
TCOF1-215ENST00000515516 CLK4Q9HAZ1 481 aaKnown RBP12.89□□□□□ -0.35
TCOF1-215ENST00000515516 KCNK13Q9HB14 408 aa12.89□□□□□ -0.35
TCOF1-215ENST00000515516 IKZF3Q9UKT9 509 aa12.89□□□□□ -0.35
TCOF1-215ENST00000515516 SPENQ96T58 3664 aaKnown RBP12.89□□□□□ -0.35
TCOF1-215ENST00000515516 RELNP78509 3460 aa12.89□□□□□ -0.35
TCOF1-215ENST00000515516 A1L4Q6 167 aa12.88□□□□□ -0.35
TCOF1-215ENST00000515516 OR5H15A6NDH6 313 aa12.88□□□□□ -0.35
TCOF1-215ENST00000515516 OR2W5A6NFC9 320 aa12.88□□□□□ -0.35
TCOF1-215ENST00000515516 MAGEB17A8MXT2 336 aa12.88□□□□□ -0.35
TCOF1-215ENST00000515516 TP73O15350 636 aa12.88□□□□□ -0.35
TCOF1-215ENST00000515516 CHST10O43529 356 aa12.88□□□□□ -0.35
TCOF1-215ENST00000515516 WDR47O94967 919 aa12.88□□□□□ -0.35
TCOF1-215ENST00000515516 RASAL1O95294 804 aa12.88□□□□□ -0.35
TCOF1-215ENST00000515516 FHP07954 510 aa12.88□□□□□ -0.35
TCOF1-215ENST00000515516 GNAZP19086 355 aa12.88□□□□□ -0.35
TCOF1-215ENST00000515516 HNF4AP41235 474 aa12.88□□□□□ -0.35
TCOF1-215ENST00000515516 PER3P56645 1201 aa12.88□□□□□ -0.35
TCOF1-215ENST00000515516 OR4D2P58180 307 aa12.88□□□□□ -0.35
TCOF1-215ENST00000515516 TAS2R50P59544 299 aa12.88□□□□□ -0.35
TCOF1-215ENST00000515516 REEP5Q00765 189 aa12.88□□□□□ -0.35
TCOF1-215ENST00000515516 CBLBQ13191 982 aa12.88□□□□□ -0.35
TCOF1-215ENST00000515516 TSNQ15631 228 aaKnown RBP12.88□□□□□ -0.35
TCOF1-215ENST00000515516 SFT2D3Q587I9 215 aa12.88□□□□□ -0.35
TCOF1-215ENST00000515516 C3orf62Q6ZUJ4 267 aa12.88□□□□□ -0.35
TCOF1-215ENST00000515516 CEP97Q8IW35 865 aa12.88□□□□□ -0.35
TCOF1-215ENST00000515516 TCAIMQ8N3R3 496 aa12.88□□□□□ -0.35
TCOF1-215ENST00000515516 TTLQ8NG68 377 aa12.88□□□□□ -0.35
TCOF1-215ENST00000515516 OR5T3Q8NGG3 340 aa12.88□□□□□ -0.35
TCOF1-215ENST00000515516 M1APQ8TC57 530 aa12.88□□□□□ -0.35
TCOF1-215ENST00000515516 CPNE1Q99829 537 aa12.88□□□□□ -0.35
TCOF1-215ENST00000515516 DERL2Q9GZP9 239 aa12.88□□□□□ -0.35
TCOF1-215ENST00000515516 RAB17Q9H0T7 212 aa12.88□□□□□ -0.35
TCOF1-215ENST00000515516 CNOT10Q9H9A5 744 aaKnown RBP12.88□□□□□ -0.35
TCOF1-215ENST00000515516 ERRFI1Q9UJM3 462 aaPredicted RBP12.88□□□□□ -0.35
TCOF1-215ENST00000515516 OSGIN2Q9Y236 505 aa12.88□□□□□ -0.35
TCOF1-215ENST00000515516 NCF1BA6NI72 391 aaPredicted RBP12.87□□□□□ -0.35
TCOF1-215ENST00000515516 NCF1CA8MVU1 366 aaPredicted RBP12.87□□□□□ -0.35
TCOF1-215ENST00000515516 RAD51CO43502 376 aa12.87□□□□□ -0.35
TCOF1-215ENST00000515516 PRAMEF2O60811 474 aa12.87□□□□□ -0.35
TCOF1-215ENST00000515516 B4GALT2O60909 372 aa12.87□□□□□ -0.35
TCOF1-215ENST00000515516 CRYABP02511 175 aaKnown RBP12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms