RNA–Protein interactions for RNA: ENST00000515385.1

SMAD1-215, Transcript of SMAD family member 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SMAD1, Length 2,085 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-215ENST00000515385 GTF2H2Q13888 395 aa12.38□□□□□ -0.43
SMAD1-215ENST00000515385 VEZF1Q14119 521 aa12.38□□□□□ -0.43
SMAD1-215ENST00000515385 RNLSQ5VYX0 342 aa12.38□□□□□ -0.43
SMAD1-215ENST00000515385 GTF2H2CQ6P1K8 395 aa12.38□□□□□ -0.43
SMAD1-215ENST00000515385 ALKAL1Q6UXT8 129 aa12.38□□□□□ -0.43
SMAD1-215ENST00000515385 TRIM46Q7Z4K8 759 aa12.38□□□□□ -0.43
SMAD1-215ENST00000515385 TAC4Q86UU9 113 aa12.38□□□□□ -0.43
SMAD1-215ENST00000515385 LRRC17Q8N6Y2 441 aa12.38□□□□□ -0.43
SMAD1-215ENST00000515385 NECTIN4Q96NY8 510 aa12.38□□□□□ -0.43
SMAD1-215ENST00000515385 SORCS2Q96PQ0 1159 aa12.38□□□□□ -0.43
SMAD1-215ENST00000515385 GPR21Q99679 349 aa12.38□□□□□ -0.43
SMAD1-215ENST00000515385 CLEC4MQ9H2X3 399 aaPredicted RBP12.38□□□□□ -0.43
SMAD1-215ENST00000515385 LRTM1Q9HBL6 345 aa12.38□□□□□ -0.43
SMAD1-215ENST00000515385 NT5MQ9NPB1 228 aa12.38□□□□□ -0.43
SMAD1-215ENST00000515385 PDGFCQ9NRA1 345 aa12.38□□□□□ -0.43
SMAD1-215ENST00000515385 NDUFB11Q9NX14 153 aa12.38□□□□□ -0.43
SMAD1-215ENST00000515385 UBQLN2Q9UHD9 624 aa12.38□□□□□ -0.43
SMAD1-215ENST00000515385 FAM50BQ9Y247 325 aa12.38□□□□□ -0.43
SMAD1-215ENST00000515385 PADI2Q9Y2J8 665 aa12.38□□□□□ -0.43
SMAD1-215ENST00000515385 MED16Q9Y2X0 877 aa12.38□□□□□ -0.43
SMAD1-215ENST00000515385 ZNF175Q9Y473 711 aa12.38□□□□□ -0.43
SMAD1-215ENST00000515385 KCTD3Q9Y597 815 aa12.38□□□□□ -0.43
SMAD1-215ENST00000515385 GJA3Q9Y6H8 435 aa12.38□□□□□ -0.43
SMAD1-215ENST00000515385 CITO14578 2027 aa12.37□□□□□ -0.43
SMAD1-215ENST00000515385 RALGAPA2Q2PPJ7 1873 aa12.37□□□□□ -0.43
SMAD1-215ENST00000515385 COL11A1P12107 1806 aaPredicted RBP12.37□□□□□ -0.43
SMAD1-215ENST00000515385 C19orf81C9J6K1 198 aa12.37□□□□□ -0.43
SMAD1-215ENST00000515385 ZNF623O75123 536 aa12.37□□□□□ -0.43
SMAD1-215ENST00000515385 NDUFS3O75489 264 aa12.37□□□□□ -0.43
SMAD1-215ENST00000515385 MMP2P08253 660 aa12.37□□□□□ -0.43
SMAD1-215ENST00000515385 USP17L7P0C7H9 530 aa12.37□□□□□ -0.43
SMAD1-215ENST00000515385 HK1P19367 917 aa12.37□□□□□ -0.43
SMAD1-215ENST00000515385 HMGB2P26583 209 aaKnown RBP12.37□□□□□ -0.43
SMAD1-215ENST00000515385 PTPN6P29350 595 aa12.37□□□□□ -0.43
SMAD1-215ENST00000515385 ABATP80404 500 aa12.37□□□□□ -0.43
SMAD1-215ENST00000515385 IQCCQ4KMZ1 466 aa12.37□□□□□ -0.43
SMAD1-215ENST00000515385 USP39Q53GS9 565 aaKnown RBP12.37□□□□□ -0.43
SMAD1-215ENST00000515385 ZNF628Q5EBL2 1059 aa12.37□□□□□ -0.43
SMAD1-215ENST00000515385 MARC1Q5VT66 337 aa12.37□□□□□ -0.43
SMAD1-215ENST00000515385 DOK6Q6PKX4 331 aa12.37□□□□□ -0.43
SMAD1-215ENST00000515385 C10orf111Q8N326 155 aa12.37□□□□□ -0.43
SMAD1-215ENST00000515385 RTL3Q8N8U3 475 aaKnown RBP12.37□□□□□ -0.43
SMAD1-215ENST00000515385 RADILQ96JH8 1075 aa12.37□□□□□ -0.43
SMAD1-215ENST00000515385 C7orf34Q96L11 122 aa12.37□□□□□ -0.43
SMAD1-215ENST00000515385 PPP1R16BQ96T49 567 aa12.37□□□□□ -0.43
SMAD1-215ENST00000515385 FEVQ99581 238 aa12.37□□□□□ -0.43
SMAD1-215ENST00000515385 MAPKAP1Q9BPZ7 522 aa12.37□□□□□ -0.43
SMAD1-215ENST00000515385 TMEM168Q9H0V1 697 aa12.37□□□□□ -0.43
SMAD1-215ENST00000515385 SLC6A13Q9NSD5 602 aa12.37□□□□□ -0.43
SMAD1-215ENST00000515385 SLC39A1Q9NY26 324 aa12.37□□□□□ -0.43
SMAD1-215ENST00000515385 ERAP1Q9NZ08 941 aa12.37□□□□□ -0.43
SMAD1-215ENST00000515385 CSADQ9Y600 493 aa12.37□□□□□ -0.43
SMAD1-215ENST00000515385 ANKRD12Q6UB98 2062 aa12.37□□□□□ -0.43
SMAD1-215ENST00000515385 NUP205Q92621 2012 aa12.36□□□□□ -0.43
SMAD1-215ENST00000515385 LCTP09848 1927 aa12.36□□□□□ -0.43
SMAD1-215ENST00000515385 INMT-MINDY4F8WBC2 141 aa12.36□□□□□ -0.43
SMAD1-215ENST00000515385 H3BM21 787 aa12.36□□□□□ -0.43
SMAD1-215ENST00000515385 TNFRSF11BO00300 401 aa12.36□□□□□ -0.43
SMAD1-215ENST00000515385 FZD6O60353 706 aa12.36□□□□□ -0.43
SMAD1-215ENST00000515385 RNGTTO60942 597 aaKnown RBP12.36□□□□□ -0.43
SMAD1-215ENST00000515385 ATG13O75143 517 aa12.36□□□□□ -0.43
SMAD1-215ENST00000515385 CCNB2O95067 398 aa12.36□□□□□ -0.43
SMAD1-215ENST00000515385 PEX11BO96011 259 aa12.36□□□□□ -0.43
SMAD1-215ENST00000515385 EPOP01588 193 aa12.36□□□□□ -0.43
SMAD1-215ENST00000515385 PRPS2P11908 318 aa12.36□□□□□ -0.43
SMAD1-215ENST00000515385 CENPAP49450 140 aa12.36□□□□□ -0.43
SMAD1-215ENST00000515385 NADSYN1Q6IA69 706 aa12.36□□□□□ -0.43
SMAD1-215ENST00000515385 OVOS1Q6IE37 1185 aa12.36□□□□□ -0.43
SMAD1-215ENST00000515385 AFTPHQ6ULP2 937 aa12.36□□□□□ -0.43
SMAD1-215ENST00000515385 Q6ZPB1 254 aaPredicted RBP12.36□□□□□ -0.43
SMAD1-215ENST00000515385 VTCN1Q7Z7D3 282 aa12.36□□□□□ -0.43
SMAD1-215ENST00000515385 TLK2Q86UE8 772 aa12.36□□□□□ -0.43
SMAD1-215ENST00000515385 KRTCAP2Q8N6L1 136 aa12.36□□□□□ -0.43
SMAD1-215ENST00000515385 OR10G2Q8NGC3 310 aa12.36□□□□□ -0.43
SMAD1-215ENST00000515385 RBPMSQ93062 196 aaKnown RBP12.36□□□□□ -0.43
SMAD1-215ENST00000515385 SPATA33Q96N06 139 aa12.36□□□□□ -0.43
SMAD1-215ENST00000515385 CAMKK2Q96RR4 588 aa12.36□□□□□ -0.43
SMAD1-215ENST00000515385 USB1Q9BQ65 265 aaKnown RBP12.36□□□□□ -0.43
SMAD1-215ENST00000515385 EVA1BQ9NVM1 165 aa12.36□□□□□ -0.43
SMAD1-215ENST00000515385 COQ3Q9NZJ6 369 aa12.36□□□□□ -0.43
SMAD1-215ENST00000515385 GMEB2Q9UKD1 530 aa12.36□□□□□ -0.43
SMAD1-215ENST00000515385 ACAD8Q9UKU7 415 aa12.36□□□□□ -0.43
SMAD1-215ENST00000515385 NDRG2Q9UN36 371 aaKnown RBP12.36□□□□□ -0.43
SMAD1-215ENST00000515385 DIMT1Q9UNQ2 313 aaKnown RBP12.36□□□□□ -0.43
SMAD1-215ENST00000515385 LSM2Q9Y333 95 aaKnown RBP12.36□□□□□ -0.43
SMAD1-215ENST00000515385 ASB4Q9Y574 426 aa12.36□□□□□ -0.43
SMAD1-215ENST00000515385 ANKRD36A6QL64 1941 aa12.36□□□□□ -0.43
SMAD1-215ENST00000515385 RPS10-NUDT3A0A1W2PQS6 291 aa12.36□□□□□ -0.43
SMAD1-215ENST00000515385 SMLR1H3BR10 107 aa12.36□□□□□ -0.43
SMAD1-215ENST00000515385 SGK494L7N484 410 aa12.36□□□□□ -0.43
SMAD1-215ENST00000515385 FABP7O15540 132 aa12.36□□□□□ -0.43
SMAD1-215ENST00000515385 PPM1BO75688 479 aa12.36□□□□□ -0.43
SMAD1-215ENST00000515385 CDRT1O95170 752 aa12.36□□□□□ -0.43
SMAD1-215ENST00000515385 FHP07954 510 aa12.36□□□□□ -0.43
SMAD1-215ENST00000515385 CKMT1AP12532 417 aa12.36□□□□□ -0.43
SMAD1-215ENST00000515385 ZP3P21754 424 aa12.36□□□□□ -0.43
SMAD1-215ENST00000515385 LHCGRP22888 699 aa12.36□□□□□ -0.43
SMAD1-215ENST00000515385 GPR85P60893 370 aa12.36□□□□□ -0.43
SMAD1-215ENST00000515385 RPS14P62263 151 aaKnown RBP12.36□□□□□ -0.43
SMAD1-215ENST00000515385 SCRN3Q0VDG4 424 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms