RNA–Protein interactions for RNA: ENST00000514743.5

PDLIM5-219, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2 BASIC

Gene PDLIM5, Length 3,356 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-219ENST00000514743 BTBD16Q32M84 506 aa7.23□□□□□ -1.25
PDLIM5-219ENST00000514743 ARL13AQ5H913 290 aaPredicted RBP7.23□□□□□ -1.25
PDLIM5-219ENST00000514743 MS4A13Q5J8X5 152 aa7.23□□□□□ -1.25
PDLIM5-219ENST00000514743 KIAA0930Q6ICG6 404 aaPredicted RBP7.23□□□□□ -1.25
PDLIM5-219ENST00000514743 TIGD7Q6NT04 549 aaPredicted RBP7.23□□□□□ -1.25
PDLIM5-219ENST00000514743 SLC25A24Q6NUK1 477 aa7.23□□□□□ -1.25
PDLIM5-219ENST00000514743 OR8H3Q8N146 312 aa7.23□□□□□ -1.25
PDLIM5-219ENST00000514743 PNPLA1Q8N8W4 532 aa7.23□□□□□ -1.25
PDLIM5-219ENST00000514743 OR13J1Q8NGT2 312 aa7.23□□□□□ -1.25
PDLIM5-219ENST00000514743 ZNF461Q8TAF7 563 aa7.23□□□□□ -1.25
PDLIM5-219ENST00000514743 TADA1Q96BN2 335 aa7.23□□□□□ -1.25
PDLIM5-219ENST00000514743 NXNL1Q96CM4 212 aa7.23□□□□□ -1.25
PDLIM5-219ENST00000514743 FAM122AQ96E09 287 aa7.23□□□□□ -1.25
PDLIM5-219ENST00000514743 MTERF3Q96E29 417 aa7.23□□□□□ -1.25
PDLIM5-219ENST00000514743 IMP4Q96G21 291 aaKnown RBP7.23□□□□□ -1.25
PDLIM5-219ENST00000514743 KLHL15Q96M94 604 aa7.23□□□□□ -1.25
PDLIM5-219ENST00000514743 MAP3K3Q99759 626 aa7.23□□□□□ -1.25
PDLIM5-219ENST00000514743 GDF15Q99988 308 aa7.23□□□□□ -1.25
PDLIM5-219ENST00000514743 FAM212BQ9NTI7 297 aaPredicted RBP7.23□□□□□ -1.25
PDLIM5-219ENST00000514743 CD300AQ9UGN4 299 aa7.23□□□□□ -1.25
PDLIM5-219ENST00000514743 RUVBL2Q9Y230 463 aaKnown RBP7.23□□□□□ -1.25
PDLIM5-219ENST00000514743 LIPT1Q9Y234 373 aa7.23□□□□□ -1.25
PDLIM5-219ENST00000514743 RAP2CQ9Y3L5 183 aa7.23□□□□□ -1.25
PDLIM5-219ENST00000514743 SCN5AQ14524 2016 aa7.23□□□□□ -1.25
PDLIM5-219ENST00000514743 PLXNA4Q9HCM2 1894 aa7.23□□□□□ -1.25
PDLIM5-219ENST00000514743 H7C2Y5 167 aa7.23□□□□□ -1.25
PDLIM5-219ENST00000514743 L7N2F9 121 aa7.23□□□□□ -1.25
PDLIM5-219ENST00000514743 AIM2O14862 343 aa7.23□□□□□ -1.25
PDLIM5-219ENST00000514743 SLC30A4O14863 429 aa7.23□□□□□ -1.25
PDLIM5-219ENST00000514743 TFECO14948 347 aaPredicted RBP7.23□□□□□ -1.25
PDLIM5-219ENST00000514743 CFLARO15519 480 aa7.23□□□□□ -1.25
PDLIM5-219ENST00000514743 WISP3O95389 354 aaPredicted RBP7.23□□□□□ -1.25
PDLIM5-219ENST00000514743 VNN2O95498 520 aa7.23□□□□□ -1.25
PDLIM5-219ENST00000514743 BMP4P12644 408 aa7.23□□□□□ -1.25
PDLIM5-219ENST00000514743 COX4I1P13073 169 aa7.23□□□□□ -1.25
PDLIM5-219ENST00000514743 YAP1P46937 504 aaKnown RBP7.23□□□□□ -1.25
PDLIM5-219ENST00000514743 TM4SF4P48230 202 aa7.23□□□□□ -1.25
PDLIM5-219ENST00000514743 TNK2Q07912 1038 aa7.23□□□□□ -1.25
PDLIM5-219ENST00000514743 SLC10A7Q0GE19 358 aa7.23□□□□□ -1.25
PDLIM5-219ENST00000514743 CLN3Q13286 438 aa7.23□□□□□ -1.25
PDLIM5-219ENST00000514743 PAGE2BQ5JRK9 111 aa7.23□□□□□ -1.25
PDLIM5-219ENST00000514743 TTC33Q6PID6 262 aaPredicted RBP7.23□□□□□ -1.25
PDLIM5-219ENST00000514743 ETV3LQ6ZN32 361 aa7.23□□□□□ -1.25
PDLIM5-219ENST00000514743 CREB3L2Q70SY1 520 aa7.23□□□□□ -1.25
PDLIM5-219ENST00000514743 KDELC2Q7Z4H8 507 aa7.23□□□□□ -1.25
PDLIM5-219ENST00000514743 KRT78Q8N1N4 520 aa7.23□□□□□ -1.25
PDLIM5-219ENST00000514743 PGBD5Q8N414 524 aa7.23□□□□□ -1.25
PDLIM5-219ENST00000514743 MYEOVQ96EZ4 313 aa7.23□□□□□ -1.25
PDLIM5-219ENST00000514743 HMCESQ96FZ2 354 aa7.23□□□□□ -1.25
PDLIM5-219ENST00000514743 NARS2Q96I59 477 aaKnown RBP7.23□□□□□ -1.25
PDLIM5-219ENST00000514743 SORBS1Q9BX66 1292 aaKnown RBP7.23□□□□□ -1.25
PDLIM5-219ENST00000514743 EFCAB1Q9HAE3 211 aa7.23□□□□□ -1.25
PDLIM5-219ENST00000514743 TM9SF3Q9HD45 589 aa7.23□□□□□ -1.25
PDLIM5-219ENST00000514743 ANAPC1Q9H1A4 1944 aa7.23□□□□□ -1.25
PDLIM5-219ENST00000514743 MARCH11A6NNE9 402 aa7.23□□□□□ -1.25
PDLIM5-219ENST00000514743 TXNL1O43396 289 aa7.23□□□□□ -1.25
PDLIM5-219ENST00000514743 RPL14P50914 215 aaKnown RBP7.23□□□□□ -1.25
PDLIM5-219ENST00000514743 TMBIM6P55061 237 aa7.23□□□□□ -1.25
PDLIM5-219ENST00000514743 WNT3AP56704 352 aa7.23□□□□□ -1.25
PDLIM5-219ENST00000514743 TAS2R39P59534 338 aa7.23□□□□□ -1.25
PDLIM5-219ENST00000514743 RGS1Q08116 209 aa7.23□□□□□ -1.25
PDLIM5-219ENST00000514743 C17orf67Q0P5P2 114 aa7.23□□□□□ -1.25
PDLIM5-219ENST00000514743 STARD3Q14849 445 aa7.23□□□□□ -1.25
PDLIM5-219ENST00000514743 KLHL12Q53G59 568 aa7.23□□□□□ -1.25
PDLIM5-219ENST00000514743 CCNYL2Q5T2Q4 361 aa7.23□□□□□ -1.25
PDLIM5-219ENST00000514743 ZNF470Q6ECI4 717 aa7.23□□□□□ -1.25
PDLIM5-219ENST00000514743 PSRC1Q6PGN9 363 aaPredicted RBP7.23□□□□□ -1.25
PDLIM5-219ENST00000514743 XKRXQ6PP77 449 aa7.23□□□□□ -1.25
PDLIM5-219ENST00000514743 MON1AQ86VX9 555 aa7.23□□□□□ -1.25
PDLIM5-219ENST00000514743 PLCZ1Q86YW0 608 aa7.23□□□□□ -1.25
PDLIM5-219ENST00000514743 SCN4BQ8IWT1 228 aa7.23□□□□□ -1.25
PDLIM5-219ENST00000514743 SLC43A2Q8N370 569 aa7.23□□□□□ -1.25
PDLIM5-219ENST00000514743 MFSD4AQ8N468 514 aa7.23□□□□□ -1.25
PDLIM5-219ENST00000514743 TEX26Q8N6G2 289 aa7.23□□□□□ -1.25
PDLIM5-219ENST00000514743 MAGEE2Q8TD90 523 aaPredicted RBP7.23□□□□□ -1.25
PDLIM5-219ENST00000514743 PROX1Q92786 737 aa7.23□□□□□ -1.25
PDLIM5-219ENST00000514743 IGSF8Q969P0 613 aa7.23□□□□□ -1.25
PDLIM5-219ENST00000514743 OMDQ99983 421 aa7.23□□□□□ -1.25
PDLIM5-219ENST00000514743 FAM83CQ9BQN1 747 aa7.23□□□□□ -1.25
PDLIM5-219ENST00000514743 SLC25A51Q9H1U9 297 aa7.23□□□□□ -1.25
PDLIM5-219ENST00000514743 OLAHQ9NV23 265 aa7.23□□□□□ -1.25
PDLIM5-219ENST00000514743 TBC1D13Q9NVG8 400 aa7.23□□□□□ -1.25
PDLIM5-219ENST00000514743 TMEM248Q9NWD8 314 aa7.23□□□□□ -1.25
PDLIM5-219ENST00000514743 MGAT4AQ9UM21 535 aa7.23□□□□□ -1.25
PDLIM5-219ENST00000514743 PCDHB10Q9UN67 800 aa7.23□□□□□ -1.25
PDLIM5-219ENST00000514743 FIS1Q9Y3D6 152 aa7.23□□□□□ -1.25
PDLIM5-219ENST00000514743 PCDHB9Q9Y5E1 797 aa7.23□□□□□ -1.25
PDLIM5-219ENST00000514743 OBSL1O75147 1896 aa7.23□□□□□ -1.25
PDLIM5-219ENST00000514743 TMEM82A0PJX8 343 aa7.22□□□□□ -1.25
PDLIM5-219ENST00000514743 TTC24A2A3L6 582 aaPredicted RBP7.22□□□□□ -1.25
PDLIM5-219ENST00000514743 RGSL1A5PLK6 1076 aa7.22□□□□□ -1.25
PDLIM5-219ENST00000514743 RHPN2P1A8MT19 583 aa7.22□□□□□ -1.25
PDLIM5-219ENST00000514743 J3KRW8 73 aa7.22□□□□□ -1.25
PDLIM5-219ENST00000514743 SCAMP3O14828 347 aaKnown RBP7.22□□□□□ -1.25
PDLIM5-219ENST00000514743 GJB3O75712 270 aa7.22□□□□□ -1.25
PDLIM5-219ENST00000514743 EIF3GO75821 320 aaKnown RBP eCLIP7.22□□□□□ -1.25
PDLIM5-219ENST00000514743 SLC22A5O76082 557 aa7.22□□□□□ -1.25
PDLIM5-219ENST00000514743 SCAF4O95104 1147 aaKnown RBP7.22□□□□□ -1.25
PDLIM5-219ENST00000514743 ZDHHC11BP0C7U3 371 aa7.22□□□□□ -1.25
PDLIM5-219ENST00000514743 ELNP15502 786 aa7.22□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms