RNA–Protein interactions for RNA: ENST00000514093.5

SQSTM1-215, Transcript of sequestosome 1, humanhuman

TSL 5

Gene SQSTM1, Length 842 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-215ENST00000514093 PEX1O43933 1283 aa19.03■□□□□ 0.64
SQSTM1-215ENST00000514093 DNAJB6O75190 326 aa19.03■□□□□ 0.64
SQSTM1-215ENST00000514093 APRTP07741 180 aa19.03■□□□□ 0.64
SQSTM1-215ENST00000514093 MLF1P58340 268 aa19.03■□□□□ 0.64
SQSTM1-215ENST00000514093 GPR85P60893 370 aa19.03■□□□□ 0.64
SQSTM1-215ENST00000514093 TBX2Q13207 712 aaPredicted RBP19.03■□□□□ 0.64
SQSTM1-215ENST00000514093 PCGF5Q86SE9 256 aa19.03■□□□□ 0.64
SQSTM1-215ENST00000514093 REXO1L1PQ8IX06 675 aa19.03■□□□□ 0.64
SQSTM1-215ENST00000514093 POGLUT1Q8NBL1 392 aa19.03■□□□□ 0.64
SQSTM1-215ENST00000514093 NINJ1Q92982 152 aa19.03■□□□□ 0.64
SQSTM1-215ENST00000514093 SLC30A3Q99726 388 aa19.03■□□□□ 0.64
SQSTM1-215ENST00000514093 DEFB127Q9H1M4 99 aa19.03■□□□□ 0.64
SQSTM1-215ENST00000514093 TRIM45Q9H8W5 580 aaPredicted RBP19.03■□□□□ 0.64
SQSTM1-215ENST00000514093 TMEM184CQ9NVA4 438 aa19.03■□□□□ 0.64
SQSTM1-215ENST00000514093 GRID2IPA4D2P6 1211 aa19.02■□□□□ 0.64
SQSTM1-215ENST00000514093 TMEM200CA6NKL6 621 aa19.02■□□□□ 0.64
SQSTM1-215ENST00000514093 KLRC4-KLRK1H3BQV0 150 aa19.02■□□□□ 0.64
SQSTM1-215ENST00000514093 KLK8O60259 260 aa19.02■□□□□ 0.64
SQSTM1-215ENST00000514093 VAPBO95292 243 aa19.02■□□□□ 0.64
SQSTM1-215ENST00000514093 ARNTP27540 789 aa19.02■□□□□ 0.64
SQSTM1-215ENST00000514093 COILP38432 576 aaPredicted RBP19.02■□□□□ 0.64
SQSTM1-215ENST00000514093 HLCSP50747 726 aa19.02■□□□□ 0.64
SQSTM1-215ENST00000514093 RPS15AP62244 130 aaKnown RBP19.02■□□□□ 0.64
SQSTM1-215ENST00000514093 SNTB1Q13884 538 aaKnown RBP19.02■□□□□ 0.64
SQSTM1-215ENST00000514093 TYSND1Q2T9J0 566 aa19.02■□□□□ 0.64
SQSTM1-215ENST00000514093 MEI1Q5TIA1 1274 aa19.02■□□□□ 0.64
SQSTM1-215ENST00000514093 Q71RC1 249 aaPredicted RBP19.02■□□□□ 0.64
SQSTM1-215ENST00000514093 LRRC57Q8N9N7 239 aa19.02■□□□□ 0.64
SQSTM1-215ENST00000514093 TC2NQ8N9U0 490 aa19.02■□□□□ 0.64
SQSTM1-215ENST00000514093 POLDIP3Q9BY77 421 aaKnown RBP19.02■□□□□ 0.64
SQSTM1-215ENST00000514093 DLL4Q9NR61 685 aa19.02■□□□□ 0.64
SQSTM1-215ENST00000514093 ZNF358Q9NW07 568 aa19.02■□□□□ 0.64
SQSTM1-215ENST00000514093 ST6GALNAC2Q9UJ37 374 aa19.02■□□□□ 0.64
SQSTM1-215ENST00000514093 KLF13Q9Y2Y9 288 aaPredicted RBP19.02■□□□□ 0.64
SQSTM1-215ENST00000514093 KCNE1BA0A087WTH5 132 aa19.01■□□□□ 0.63
SQSTM1-215ENST00000514093 KIF5CO60282 957 aa19.01■□□□□ 0.63
SQSTM1-215ENST00000514093 LCMT2O60294 686 aaKnown RBP19.01■□□□□ 0.63
SQSTM1-215ENST00000514093 F7P08709 466 aaPredicted RBP19.01■□□□□ 0.63
SQSTM1-215ENST00000514093 STIP1P31948 543 aaKnown RBP19.01■□□□□ 0.63
SQSTM1-215ENST00000514093 TRHRP34981 398 aaPredicted RBP19.01■□□□□ 0.63
SQSTM1-215ENST00000514093 OLR1P78380 273 aa19.01■□□□□ 0.63
SQSTM1-215ENST00000514093 CUL1Q13616 776 aa19.01■□□□□ 0.63
SQSTM1-215ENST00000514093 ARHGAP11AQ6P4F7 1023 aa19.01■□□□□ 0.63
SQSTM1-215ENST00000514093 SDCCAG8Q86SQ7 713 aaPredicted RBP19.01■□□□□ 0.63
SQSTM1-215ENST00000514093 SLC26A11Q86WA9 606 aa19.01■□□□□ 0.63
SQSTM1-215ENST00000514093 CLYBLQ8N0X4 340 aa19.01■□□□□ 0.63
SQSTM1-215ENST00000514093 CAMKVQ8NCB2 501 aa19.01■□□□□ 0.63
SQSTM1-215ENST00000514093 OR5M3Q8NGP4 307 aa19.01■□□□□ 0.63
SQSTM1-215ENST00000514093 C16orf52Q8NHV5 167 aa19.01■□□□□ 0.63
SQSTM1-215ENST00000514093 TM4SF19Q96DZ7 209 aa19.01■□□□□ 0.63
SQSTM1-215ENST00000514093 MFSD3Q96ES6 412 aa19.01■□□□□ 0.63
SQSTM1-215ENST00000514093 PWWP2AQ96N64 755 aa19.01■□□□□ 0.63
SQSTM1-215ENST00000514093 AMFRQ9UKV5 643 aa19.01■□□□□ 0.63
SQSTM1-215ENST00000514093 SH2B3Q9UQQ2 575 aa19.01■□□□□ 0.63
SQSTM1-215ENST00000514093 PLEKHA6Q9Y2H5 1048 aa19.01■□□□□ 0.63
SQSTM1-215ENST00000514093 RPH3AQ9Y2J0 694 aaPredicted RBP19.01■□□□□ 0.63
SQSTM1-215ENST00000514093 FBN3Q75N90 2809 aa19.01■□□□□ 0.63
SQSTM1-215ENST00000514093 VPS13CQ709C8 3753 aa19■□□□□ 0.63
SQSTM1-215ENST00000514093 FAM237BA0A1B0GVD1 139 aa19■□□□□ 0.63
SQSTM1-215ENST00000514093 E5RI56 91 aa19■□□□□ 0.63
SQSTM1-215ENST00000514093 H3BMM5 538 aa19■□□□□ 0.63
SQSTM1-215ENST00000514093 B4GALT2O60909 372 aa19■□□□□ 0.63
SQSTM1-215ENST00000514093 CTAG2O75638 210 aa19■□□□□ 0.63
SQSTM1-215ENST00000514093 B3GALT4O96024 378 aa19■□□□□ 0.63
SQSTM1-215ENST00000514093 ESR1P03372 595 aa19■□□□□ 0.63
SQSTM1-215ENST00000514093 IMPA1P29218 277 aa19■□□□□ 0.63
SQSTM1-215ENST00000514093 DLX5P56178 289 aa19■□□□□ 0.63
SQSTM1-215ENST00000514093 MDGA2Q7Z553 956 aa19■□□□□ 0.63
SQSTM1-215ENST00000514093 ASPGQ86U10 573 aa19■□□□□ 0.63
SQSTM1-215ENST00000514093 ZZZ3Q8IYH5 903 aa19■□□□□ 0.63
SQSTM1-215ENST00000514093 CCDC170Q8IYT3 715 aa19■□□□□ 0.63
SQSTM1-215ENST00000514093 OR5M9Q8NGP3 310 aa19■□□□□ 0.63
SQSTM1-215ENST00000514093 OR10Q1Q8NGQ4 319 aa19■□□□□ 0.63
SQSTM1-215ENST00000514093 SLC13A3Q8WWT9 602 aa19■□□□□ 0.63
SQSTM1-215ENST00000514093 OR1F2PQ96R84 312 aa19■□□□□ 0.63
SQSTM1-215ENST00000514093 GPATCH1Q9BRR8 931 aaKnown RBP19■□□□□ 0.63
SQSTM1-215ENST00000514093 LACRTQ9GZZ8 138 aa19■□□□□ 0.63
SQSTM1-215ENST00000514093 L3MBTL1Q9Y468 752 aa19■□□□□ 0.63
SQSTM1-215ENST00000514093 A8MUA0 341 aa18.99■□□□□ 0.63
SQSTM1-215ENST00000514093 NPIPA2E9PIF3 369 aa18.99■□□□□ 0.63
SQSTM1-215ENST00000514093 NPIPA3F8WFD2 350 aa18.99■□□□□ 0.63
SQSTM1-215ENST00000514093 CDK2AP1O14519 115 aa18.99■□□□□ 0.63
SQSTM1-215ENST00000514093 FHP07954 510 aa18.99■□□□□ 0.63
SQSTM1-215ENST00000514093 ZSCAN5DPP0CG00 497 aa18.99■□□□□ 0.63
SQSTM1-215ENST00000514093 CYLC1P35663 651 aaPredicted RBP18.99■□□□□ 0.63
SQSTM1-215ENST00000514093 MPP1Q00013 466 aa18.99■□□□□ 0.63
SQSTM1-215ENST00000514093 OASLQ15646 514 aaKnown RBP18.99■□□□□ 0.63
SQSTM1-215ENST00000514093 GXYLT1Q4G148 440 aa18.99■□□□□ 0.63
SQSTM1-215ENST00000514093 MRNIPQ6NTE8 343 aa18.99■□□□□ 0.63
SQSTM1-215ENST00000514093 ACAD11Q709F0 780 aa18.99■□□□□ 0.63
SQSTM1-215ENST00000514093 PEX26Q7Z412 305 aa18.99■□□□□ 0.63
SQSTM1-215ENST00000514093 UBL4BQ8N7F7 174 aa18.99■□□□□ 0.63
SQSTM1-215ENST00000514093 ZFP62Q8NB50 900 aaPredicted RBP18.99■□□□□ 0.63
SQSTM1-215ENST00000514093 ASB11Q8WXH4 323 aa18.99■□□□□ 0.63
SQSTM1-215ENST00000514093 TBC1D20Q96BZ9 403 aa18.99■□□□□ 0.63
SQSTM1-215ENST00000514093 CALR3Q96L12 384 aaKnown RBP18.99■□□□□ 0.63
SQSTM1-215ENST00000514093 PTCHD1Q96NR3 888 aa18.99■□□□□ 0.63
SQSTM1-215ENST00000514093 SMR3AQ99954 134 aa18.99■□□□□ 0.63
SQSTM1-215ENST00000514093 DEFB126Q9BYW3 111 aa18.99■□□□□ 0.63
SQSTM1-215ENST00000514093 PLSCR2Q9NRY7 297 aa18.99■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 62 ms