RNA–Protein interactions for RNA: ENST00000513960.5

VCAN-210, Transcript of versican, humanhuman

TSL 1 (best)

Gene VCAN, Length 3,973 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-210ENST00000513960 M0R082 166 aa9.32□□□□□ -0.92
VCAN-210ENST00000513960 SUV39H1O43463 412 aa9.32□□□□□ -0.92
VCAN-210ENST00000513960 PTGS2P35354 604 aa9.32□□□□□ -0.92
VCAN-210ENST00000513960 SOX3P41225 446 aa9.32□□□□□ -0.92
VCAN-210ENST00000513960 CRATP43155 626 aa9.32□□□□□ -0.92
VCAN-210ENST00000513960 ZFP36L2P47974 494 aaKnown RBP9.32□□□□□ -0.92
VCAN-210ENST00000513960 CLCN4P51793 760 aa9.32□□□□□ -0.92
VCAN-210ENST00000513960 PLD1Q13393 1074 aa9.32□□□□□ -0.92
VCAN-210ENST00000513960 VEPH1Q14D04 833 aa9.32□□□□□ -0.92
VCAN-210ENST00000513960 ZNF284Q2VY69 593 aa9.32□□□□□ -0.92
VCAN-210ENST00000513960 PROX2Q3B8N5 592 aa9.32□□□□□ -0.92
VCAN-210ENST00000513960 GPR149Q86SP6 731 aa9.32□□□□□ -0.92
VCAN-210ENST00000513960 OR8H3Q8N146 312 aa9.32□□□□□ -0.92
VCAN-210ENST00000513960 DEDD2Q8WXF8 326 aa9.32□□□□□ -0.92
VCAN-210ENST00000513960 OVCA2Q8WZ82 227 aa9.32□□□□□ -0.92
VCAN-210ENST00000513960 GGHQ92820 318 aa9.32□□□□□ -0.92
VCAN-210ENST00000513960 FRMD6Q96NE9 622 aa9.32□□□□□ -0.92
VCAN-210ENST00000513960 FEVQ99581 238 aa9.32□□□□□ -0.92
VCAN-210ENST00000513960 SLC22A4Q9H015 551 aa9.32□□□□□ -0.92
VCAN-210ENST00000513960 SH3BP4Q9P0V3 963 aa9.32□□□□□ -0.92
VCAN-210ENST00000513960 PRKAB1Q9Y478 270 aa9.32□□□□□ -0.92
VCAN-210ENST00000513960 TNPO3Q9Y5L0 923 aaKnown RBP9.32□□□□□ -0.92
VCAN-210ENST00000513960 FAM240BA0A1B0GVZ2 78 aa9.31□□□□□ -0.92
VCAN-210ENST00000513960 CLIC1O00299 241 aa9.31□□□□□ -0.92
VCAN-210ENST00000513960 E2F3O00716 465 aa9.31□□□□□ -0.92
VCAN-210ENST00000513960 ADORA3P0DMS8 318 aa9.31□□□□□ -0.92
VCAN-210ENST00000513960 EPB42P16452 691 aa9.31□□□□□ -0.92
VCAN-210ENST00000513960 RGS6P49758 472 aa9.31□□□□□ -0.92
VCAN-210ENST00000513960 PRKCDQ05655 676 aa9.31□□□□□ -0.92
VCAN-210ENST00000513960 ZNF267Q14586 743 aaPredicted RBP9.31□□□□□ -0.92
VCAN-210ENST00000513960 FAM151BQ6UXP7 276 aa9.31□□□□□ -0.92
VCAN-210ENST00000513960 OR10G2Q8NGC3 310 aa9.31□□□□□ -0.92
VCAN-210ENST00000513960 CD200R1Q8TD46 325 aa9.31□□□□□ -0.92
VCAN-210ENST00000513960 MAL2Q969L2 176 aa9.31□□□□□ -0.92
VCAN-210ENST00000513960 EGLN2Q96KS0 407 aa9.31□□□□□ -0.92
VCAN-210ENST00000513960 COL21A1Q96P44 957 aa9.31□□□□□ -0.92
VCAN-210ENST00000513960 COMMD3Q9UBI1 195 aa9.31□□□□□ -0.92
VCAN-210ENST00000513960 VWA8A3KMH1 1905 aa9.31□□□□□ -0.92
VCAN-210ENST00000513960 ARNTLO00327 626 aa9.31□□□□□ -0.92
VCAN-210ENST00000513960 SLC28A1O00337 649 aa9.31□□□□□ -0.92
VCAN-210ENST00000513960 AKR7A2O43488 359 aa9.31□□□□□ -0.92
VCAN-210ENST00000513960 TBL1XO60907 577 aa9.31□□□□□ -0.92
VCAN-210ENST00000513960 OR2B3O76000 313 aa9.31□□□□□ -0.92
VCAN-210ENST00000513960 CDRT1O95170 752 aa9.31□□□□□ -0.92
VCAN-210ENST00000513960 CCNDBP1O95273 360 aa9.31□□□□□ -0.92
VCAN-210ENST00000513960 BCKDHAP12694 445 aa9.31□□□□□ -0.92
VCAN-210ENST00000513960 KIR3DL1P43629 444 aa9.31□□□□□ -0.92
VCAN-210ENST00000513960 CCT3P49368 545 aaKnown RBP9.31□□□□□ -0.92
VCAN-210ENST00000513960 MAPK12P53778 367 aa9.31□□□□□ -0.92
VCAN-210ENST00000513960 SEMG2Q02383 582 aa9.31□□□□□ -0.92
VCAN-210ENST00000513960 KEAP1Q14145 624 aa9.31□□□□□ -0.92
VCAN-210ENST00000513960 GPAT3Q53EU6 434 aa9.31□□□□□ -0.92
VCAN-210ENST00000513960 CTSL3PQ5NE16 218 aa9.31□□□□□ -0.92
VCAN-210ENST00000513960 SPOUT1Q5T280 376 aaKnown RBP9.31□□□□□ -0.92
VCAN-210ENST00000513960 FAAH2Q6GMR7 532 aa9.31□□□□□ -0.92
VCAN-210ENST00000513960 SUSD1Q6UWL2 747 aa9.31□□□□□ -0.92
VCAN-210ENST00000513960 SLC46A3Q7Z3Q1 461 aa9.31□□□□□ -0.92
VCAN-210ENST00000513960 REM2Q8IYK8 340 aaPredicted RBP9.31□□□□□ -0.92
VCAN-210ENST00000513960 DTX3Q8N9I9 347 aa9.31□□□□□ -0.92
VCAN-210ENST00000513960 CIPCQ9C0C6 399 aa9.31□□□□□ -0.92
VCAN-210ENST00000513960 HMX1Q9NP08 348 aaPredicted RBP9.31□□□□□ -0.92
VCAN-210ENST00000513960 IL1RAPQ9NPH3 570 aa9.31□□□□□ -0.92
VCAN-210ENST00000513960 C12orf4Q9NQ89 552 aa9.31□□□□□ -0.92
VCAN-210ENST00000513960 TMEM39AQ9NV64 488 aa9.31□□□□□ -0.92
VCAN-210ENST00000513960 ZNF224Q9NZL3 707 aa9.31□□□□□ -0.92
VCAN-210ENST00000513960 RHCGQ9UBD6 479 aa9.31□□□□□ -0.92
VCAN-210ENST00000513960 MUTYHQ9UIF7 546 aa9.31□□□□□ -0.92
VCAN-210ENST00000513960 PDE4DIPQ5VU43 2346 aa9.31□□□□□ -0.92
VCAN-210ENST00000513960 WWP2O00308 870 aa9.31□□□□□ -0.92
VCAN-210ENST00000513960 IFRD1O00458 451 aaPredicted RBP9.31□□□□□ -0.92
VCAN-210ENST00000513960 ZNF7P17097 686 aaPredicted RBP9.31□□□□□ -0.92
VCAN-210ENST00000513960 CBLP22681 906 aa9.31□□□□□ -0.92
VCAN-210ENST00000513960 PIK3CBP42338 1070 aa9.31□□□□□ -0.92
VCAN-210ENST00000513960 OLR1P78380 273 aa9.31□□□□□ -0.92
VCAN-210ENST00000513960 ARF5P84085 180 aa9.31□□□□□ -0.92
VCAN-210ENST00000513960 CAP1Q01518 475 aa9.31□□□□□ -0.92
VCAN-210ENST00000513960 CACNG1Q06432 222 aa9.31□□□□□ -0.92
VCAN-210ENST00000513960 CDH18Q13634 790 aa9.31□□□□□ -0.92
VCAN-210ENST00000513960 ARMC12Q5T9G4 340 aa9.31□□□□□ -0.92
VCAN-210ENST00000513960 SLC8B1Q6J4K2 584 aa9.31□□□□□ -0.92
VCAN-210ENST00000513960 ADAMTSL2Q86TH1 951 aa9.31□□□□□ -0.92
VCAN-210ENST00000513960 OR6K2Q8NGY2 324 aa9.31□□□□□ -0.92
VCAN-210ENST00000513960 NELL1Q92832 810 aa9.31□□□□□ -0.92
VCAN-210ENST00000513960 MED30Q96HR3 178 aa9.31□□□□□ -0.92
VCAN-210ENST00000513960 CCM2Q9BSQ5 444 aa9.31□□□□□ -0.92
VCAN-210ENST00000513960 ZSCAN5AQ9BUG6 496 aa9.31□□□□□ -0.92
VCAN-210ENST00000513960 FAM126AQ9BYI3 521 aaPredicted RBP9.31□□□□□ -0.92
VCAN-210ENST00000513960 HEBP1Q9NRV9 189 aa9.31□□□□□ -0.92
VCAN-210ENST00000513960 SIRT5Q9NXA8 310 aa9.31□□□□□ -0.92
VCAN-210ENST00000513960 NUDT4Q9NZJ9 180 aa9.31□□□□□ -0.92
VCAN-210ENST00000513960 GOLGA4Q13439 2230 aaKnown RBP9.31□□□□□ -0.92
VCAN-210ENST00000513960 APOL3O95236 402 aa9.31□□□□□ -0.92
VCAN-210ENST00000513960 C1QCP02747 245 aa9.31□□□□□ -0.92
VCAN-210ENST00000513960 C9P02748 559 aa9.31□□□□□ -0.92
VCAN-210ENST00000513960 RPS3P23396 243 aaKnown RBP eCLIP9.31□□□□□ -0.92
VCAN-210ENST00000513960 SOAT1P35610 550 aa9.31□□□□□ -0.92
VCAN-210ENST00000513960 OR3A3P47888 321 aa9.31□□□□□ -0.92
VCAN-210ENST00000513960 PRIM2P49643 509 aa9.31□□□□□ -0.92
VCAN-210ENST00000513960 SMAD3P84022 425 aaKnown RBP9.31□□□□□ -0.92
VCAN-210ENST00000513960 ABHD18Q0P651 414 aa9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms