RNA–Protein interactions for RNA: ENST00000513643.5

RNF4-221, Transcript of ring finger protein 4, humanhuman

TSL 3

Gene RNF4, Length 516 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-221ENST00000513643 OR1F1O43749 312 aa9.19□□□□□ -0.94
RNF4-221ENST00000513643 ZNF500O60304 480 aaPredicted RBP9.19□□□□□ -0.94
RNF4-221ENST00000513643 GALR3O60755 368 aaPredicted RBP9.19□□□□□ -0.94
RNF4-221ENST00000513643 WDR47O94967 919 aa9.19□□□□□ -0.94
RNF4-221ENST00000513643 STATHP02808 62 aa9.19□□□□□ -0.94
RNF4-221ENST00000513643 SBK3P0C264 359 aa9.19□□□□□ -0.94
RNF4-221ENST00000513643 MYBL2P10244 700 aa9.19□□□□□ -0.94
RNF4-221ENST00000513643 COL6A2P12110 1019 aa9.19□□□□□ -0.94
RNF4-221ENST00000513643 NCF1P14598 390 aaPredicted RBP9.19□□□□□ -0.94
RNF4-221ENST00000513643 FBLP22087 321 aaKnown RBP9.19□□□□□ -0.94
RNF4-221ENST00000513643 IL10P22301 178 aa9.19□□□□□ -0.94
RNF4-221ENST00000513643 CNTFP26441 200 aa9.19□□□□□ -0.94
RNF4-221ENST00000513643 GSTM2P28161 218 aa9.19□□□□□ -0.94
RNF4-221ENST00000513643 TYK2P29597 1187 aa9.19□□□□□ -0.94
RNF4-221ENST00000513643 OTX2P32243 289 aa9.19□□□□□ -0.94
RNF4-221ENST00000513643 AVPR1BP47901 424 aa9.19□□□□□ -0.94
RNF4-221ENST00000513643 HSPA7P48741 367 aa9.19□□□□□ -0.94
RNF4-221ENST00000513643 SERPINB8P50452 374 aa9.19□□□□□ -0.94
RNF4-221ENST00000513643 SERPINB9P50453 376 aa9.19□□□□□ -0.94
RNF4-221ENST00000513643 CCL11P51671 97 aa9.19□□□□□ -0.94
RNF4-221ENST00000513643 MAT1AQ00266 395 aaKnown RBP9.19□□□□□ -0.94
RNF4-221ENST00000513643 OCA2Q04671 838 aa9.19□□□□□ -0.94
RNF4-221ENST00000513643 Q0VFX4 171 aa9.19□□□□□ -0.94
RNF4-221ENST00000513643 NAA30Q147X3 362 aaPredicted RBP9.19□□□□□ -0.94
RNF4-221ENST00000513643 HERC3Q15034 1050 aa9.19□□□□□ -0.94
RNF4-221ENST00000513643 PCBP2Q15366 365 aaKnown RBP eCLIP9.19□□□□□ -0.94
RNF4-221ENST00000513643 SYT16Q17RD7 645 aa9.19□□□□□ -0.94
RNF4-221ENST00000513643 FAM83EQ2M2I3 478 aa9.19□□□□□ -0.94
RNF4-221ENST00000513643 METTL2BQ6P1Q9 378 aaKnown RBP9.19□□□□□ -0.94
RNF4-221ENST00000513643 IGFL2Q6UWQ7 119 aa9.19□□□□□ -0.94
RNF4-221ENST00000513643 RAPH1Q70E73 1250 aa9.19□□□□□ -0.94
RNF4-221ENST00000513643 FRA10AC1Q70Z53 315 aa9.19□□□□□ -0.94
RNF4-221ENST00000513643 TBC1D1Q86TI0 1168 aaPredicted RBP9.19□□□□□ -0.94
RNF4-221ENST00000513643 TRPV3Q8NET8 790 aa9.19□□□□□ -0.94
RNF4-221ENST00000513643 UTP15Q8TED0 518 aaKnown RBP9.19□□□□□ -0.94
RNF4-221ENST00000513643 ESAMQ96AP7 390 aa9.19□□□□□ -0.94
RNF4-221ENST00000513643 MIEF2Q96C03 454 aa9.19□□□□□ -0.94
RNF4-221ENST00000513643 TSNARE1Q96NA8 513 aa9.19□□□□□ -0.94
RNF4-221ENST00000513643 EGFL8Q99944 293 aa9.19□□□□□ -0.94
RNF4-221ENST00000513643 NUDT9Q9BW91 350 aa9.19□□□□□ -0.94
RNF4-221ENST00000513643 CNOT10Q9H9A5 744 aaKnown RBP9.19□□□□□ -0.94
RNF4-221ENST00000513643 ZNF71Q9NQZ8 489 aaPredicted RBP9.19□□□□□ -0.94
RNF4-221ENST00000513643 ACSS2Q9NR19 701 aa9.19□□□□□ -0.94
RNF4-221ENST00000513643 LANCL2Q9NS86 450 aa9.19□□□□□ -0.94
RNF4-221ENST00000513643 DNAJC11Q9NVH1 559 aa9.19□□□□□ -0.94
RNF4-221ENST00000513643 C5AR2Q9P296 337 aa9.19□□□□□ -0.94
RNF4-221ENST00000513643 TRPC4Q9UBN4 977 aa9.19□□□□□ -0.94
RNF4-221ENST00000513643 C3orf18Q9UK00 162 aa9.19□□□□□ -0.94
RNF4-221ENST00000513643 RNF112Q9ULX5 631 aa9.19□□□□□ -0.94
RNF4-221ENST00000513643 TSC22D4Q9Y3Q8 395 aa9.19□□□□□ -0.94
RNF4-221ENST00000513643 DYRK1BQ9Y463 629 aa9.19□□□□□ -0.94
RNF4-221ENST00000513643 LRIT2A6NDA9 550 aa9.18□□□□□ -0.94
RNF4-221ENST00000513643 IDSB3KWA1 339 aa9.18□□□□□ -0.94
RNF4-221ENST00000513643 SGK494L7N484 410 aa9.18□□□□□ -0.94
RNF4-221ENST00000513643 UBXN8O00124 270 aa9.18□□□□□ -0.94
RNF4-221ENST00000513643 MASP2O00187 686 aa9.18□□□□□ -0.94
RNF4-221ENST00000513643 PEX12O00623 359 aa9.18□□□□□ -0.94
RNF4-221ENST00000513643 NDUFS4O43181 175 aa9.18□□□□□ -0.94
RNF4-221ENST00000513643 CLEC3AO75596 197 aa9.18□□□□□ -0.94
RNF4-221ENST00000513643 KLHL18O94889 574 aa9.18□□□□□ -0.94
RNF4-221ENST00000513643 INHBAP08476 426 aa9.18□□□□□ -0.94
RNF4-221ENST00000513643 RHOXF2BP0C7M4 288 aa9.18□□□□□ -0.94
RNF4-221ENST00000513643 SLC35G6P0C7Q6 338 aa9.18□□□□□ -0.94
RNF4-221ENST00000513643 COX6A1P12074 109 aa9.18□□□□□ -0.94
RNF4-221ENST00000513643 ALOX12P18054 663 aa9.18□□□□□ -0.94
RNF4-221ENST00000513643 IL1RNP18510 177 aa9.18□□□□□ -0.94
RNF4-221ENST00000513643 NR1D1P20393 614 aa9.18□□□□□ -0.94
RNF4-221ENST00000513643 CXCR2P25025 360 aa9.18□□□□□ -0.94
RNF4-221ENST00000513643 CASRP41180 1078 aa9.18□□□□□ -0.94
RNF4-221ENST00000513643 MSH2P43246 934 aa9.18□□□□□ -0.94
RNF4-221ENST00000513643 AGTR2P50052 363 aa9.18□□□□□ -0.94
RNF4-221ENST00000513643 EMP2P54851 167 aa9.18□□□□□ -0.94
RNF4-221ENST00000513643 AIMP2Q13155 320 aaKnown RBP9.18□□□□□ -0.94
RNF4-221ENST00000513643 DOC2AQ14183 400 aa9.18□□□□□ -0.94
RNF4-221ENST00000513643 SLC29A2Q14542 456 aa9.18□□□□□ -0.94
RNF4-221ENST00000513643 MYBPC3Q14896 1274 aa9.18□□□□□ -0.94
RNF4-221ENST00000513643 SETDB1Q15047 1291 aa9.18□□□□□ -0.94
RNF4-221ENST00000513643 PDK4Q16654 411 aa9.18□□□□□ -0.94
RNF4-221ENST00000513643 FBXO48Q5FWF7 155 aa9.18□□□□□ -0.94
RNF4-221ENST00000513643 TECRLQ5HYJ1 363 aa9.18□□□□□ -0.94
RNF4-221ENST00000513643 LRRK2Q5S007 2527 aa9.18□□□□□ -0.94
RNF4-221ENST00000513643 NIPAL1Q6NVV3 410 aa9.18□□□□□ -0.94
RNF4-221ENST00000513643 TMIGD1Q6UXZ0 262 aa9.18□□□□□ -0.94
RNF4-221ENST00000513643 SHISA6Q6ZSJ9 500 aa9.18□□□□□ -0.94
RNF4-221ENST00000513643 SH2D5Q6ZV89 423 aa9.18□□□□□ -0.94
RNF4-221ENST00000513643 ASB18Q6ZVZ8 466 aa9.18□□□□□ -0.94
RNF4-221ENST00000513643 LRRC70Q7Z2Q7 622 aa9.18□□□□□ -0.94
RNF4-221ENST00000513643 TMPRSS11BQ86T26 416 aa9.18□□□□□ -0.94
RNF4-221ENST00000513643 ZNF605Q86T29 641 aa9.18□□□□□ -0.94
RNF4-221ENST00000513643 HPS6Q86YV9 775 aa9.18□□□□□ -0.94
RNF4-221ENST00000513643 LAS2Q8IYD9 372 aa9.18□□□□□ -0.94
RNF4-221ENST00000513643 GALNT16Q8N428 558 aa9.18□□□□□ -0.94
RNF4-221ENST00000513643 PLPP5Q8NEB5 264 aa9.18□□□□□ -0.94
RNF4-221ENST00000513643 TTLQ8NG68 377 aa9.18□□□□□ -0.94
RNF4-221ENST00000513643 OR51Q1Q8NH59 317 aa9.18□□□□□ -0.94
RNF4-221ENST00000513643 MZB1Q8WU39 189 aa9.18□□□□□ -0.94
RNF4-221ENST00000513643 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP9.18□□□□□ -0.94
RNF4-221ENST00000513643 PSMF1Q92530 271 aa9.18□□□□□ -0.94
RNF4-221ENST00000513643 DOCK10Q96BY6 2186 aa9.18□□□□□ -0.94
RNF4-221ENST00000513643 MRRFQ96E11 262 aaKnown RBP9.18□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 63.5 ms