RNA–Protein interactions for RNA: ENST00000512274.1

PDLIM5-217, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2 BASIC

Gene PDLIM5, Length 372 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-217ENST00000512274 CHEK2O96017 543 aa10.06□□□□□ -0.8
PDLIM5-217ENST00000512274 RPN2P04844 631 aa10.06□□□□□ -0.8
PDLIM5-217ENST00000512274 SNRPB2P08579 225 aaKnown RBP10.06□□□□□ -0.8
PDLIM5-217ENST00000512274 T-ENOLP0DO92 83 aa10.06□□□□□ -0.8
PDLIM5-217ENST00000512274 KITP10721 976 aa10.06□□□□□ -0.8
PDLIM5-217ENST00000512274 EPB42P16452 691 aa10.06□□□□□ -0.8
PDLIM5-217ENST00000512274 CASP2P42575 452 aa10.06□□□□□ -0.8
PDLIM5-217ENST00000512274 GPR3P46089 330 aa10.06□□□□□ -0.8
PDLIM5-217ENST00000512274 AGTR2P50052 363 aa10.06□□□□□ -0.8
PDLIM5-217ENST00000512274 NCALDP61601 193 aa10.06□□□□□ -0.8
PDLIM5-217ENST00000512274 BTKQ06187 659 aa10.06□□□□□ -0.8
PDLIM5-217ENST00000512274 GTF2H2Q13888 395 aa10.06□□□□□ -0.8
PDLIM5-217ENST00000512274 ELOAQ14241 798 aaKnown RBP10.06□□□□□ -0.8
PDLIM5-217ENST00000512274 LSM12Q3MHD2 195 aaKnown RBP10.06□□□□□ -0.8
PDLIM5-217ENST00000512274 SYTL3Q4VX76 610 aa10.06□□□□□ -0.8
PDLIM5-217ENST00000512274 SLC9B1Q4ZJI4 515 aa10.06□□□□□ -0.8
PDLIM5-217ENST00000512274 GTF2H2CQ6P1K8 395 aa10.06□□□□□ -0.8
PDLIM5-217ENST00000512274 DOK6Q6PKX4 331 aa10.06□□□□□ -0.8
PDLIM5-217ENST00000512274 SLC30A9Q6PML9 568 aa10.06□□□□□ -0.8
PDLIM5-217ENST00000512274 C6orf15Q6UXA7 325 aaPredicted RBP10.06□□□□□ -0.8
PDLIM5-217ENST00000512274 WASH2PQ6VEQ5 465 aa10.06□□□□□ -0.8
PDLIM5-217ENST00000512274 LARP4Q71RC2 724 aaKnown RBP eCLIP10.06□□□□□ -0.8
PDLIM5-217ENST00000512274 DET1Q7L5Y6 550 aa10.06□□□□□ -0.8
PDLIM5-217ENST00000512274 GOLGA7Q7Z5G4 137 aa10.06□□□□□ -0.8
PDLIM5-217ENST00000512274 AMZ2Q86W34 360 aa10.06□□□□□ -0.8
PDLIM5-217ENST00000512274 C17orf82Q86X59 251 aaPredicted RBP10.06□□□□□ -0.8
PDLIM5-217ENST00000512274 NRROSQ86YC3 692 aa10.06□□□□□ -0.8
PDLIM5-217ENST00000512274 TRAPPC5Q8IUR0 188 aa10.06□□□□□ -0.8
PDLIM5-217ENST00000512274 APLFQ8IW19 511 aaPredicted RBP10.06□□□□□ -0.8
PDLIM5-217ENST00000512274 PARP9Q8IXQ6 854 aa10.06□□□□□ -0.8
PDLIM5-217ENST00000512274 NAGSQ8N159 534 aa10.06□□□□□ -0.8
PDLIM5-217ENST00000512274 BEND7Q8N7W2 519 aaPredicted RBP10.06□□□□□ -0.8
PDLIM5-217ENST00000512274 L3MBTL4Q8NA19 623 aa10.06□□□□□ -0.8
PDLIM5-217ENST00000512274 OR56A3Q8NH54 315 aa10.06□□□□□ -0.8
PDLIM5-217ENST00000512274 SNRNP40Q96DI7 357 aaKnown RBP10.06□□□□□ -0.8
PDLIM5-217ENST00000512274 PTCD3Q96EY7 689 aaKnown RBP10.06□□□□□ -0.8
PDLIM5-217ENST00000512274 METTL2AQ96IZ6 378 aaKnown RBP10.06□□□□□ -0.8
PDLIM5-217ENST00000512274 ZPBPQ9BS86 351 aa10.06□□□□□ -0.8
PDLIM5-217ENST00000512274 HGH1Q9BTY7 390 aa10.06□□□□□ -0.8
PDLIM5-217ENST00000512274 ULBP3Q9BZM4 244 aa10.06□□□□□ -0.8
PDLIM5-217ENST00000512274 MID1IP1Q9NPA3 183 aa10.06□□□□□ -0.8
PDLIM5-217ENST00000512274 WASH6PQ9NQA3 447 aa10.06□□□□□ -0.8
PDLIM5-217ENST00000512274 ACSS2Q9NR19 701 aa10.06□□□□□ -0.8
PDLIM5-217ENST00000512274 FBXO8Q9NRD0 319 aa10.06□□□□□ -0.8
PDLIM5-217ENST00000512274 KLC4Q9NSK0 619 aa10.06□□□□□ -0.8
PDLIM5-217ENST00000512274 ARL15Q9NXU5 204 aa10.06□□□□□ -0.8
PDLIM5-217ENST00000512274 WWOXQ9NZC7 414 aa10.06□□□□□ -0.8
PDLIM5-217ENST00000512274 TAAR2Q9P1P5 351 aa10.06□□□□□ -0.8
PDLIM5-217ENST00000512274 OPTCQ9UBM4 332 aa10.06□□□□□ -0.8
PDLIM5-217ENST00000512274 KLHL3Q9UH77 587 aa10.06□□□□□ -0.8
PDLIM5-217ENST00000512274 CSMD1Q96PZ7 3565 aa10.06□□□□□ -0.8
PDLIM5-217ENST00000512274 CENPEQ02224 2701 aa10.05□□□□□ -0.8
PDLIM5-217ENST00000512274 ARGFXA6NJG6 315 aa10.05□□□□□ -0.8
PDLIM5-217ENST00000512274 OR7A17O14581 309 aa10.05□□□□□ -0.8
PDLIM5-217ENST00000512274 C1orf105O95561 183 aa10.05□□□□□ -0.8
PDLIM5-217ENST00000512274 CEACAM5P06731 702 aa10.05□□□□□ -0.8
PDLIM5-217ENST00000512274 ACPPP15309 386 aa10.05□□□□□ -0.8
PDLIM5-217ENST00000512274 CCND1P24385 295 aa10.05□□□□□ -0.8
PDLIM5-217ENST00000512274 PTPN4P29074 926 aa10.05□□□□□ -0.8
PDLIM5-217ENST00000512274 PNLIPRP1P54315 467 aa10.05□□□□□ -0.8
PDLIM5-217ENST00000512274 CDH13P55290 713 aa10.05□□□□□ -0.8
PDLIM5-217ENST00000512274 FOXM1Q08050 763 aa10.05□□□□□ -0.8
PDLIM5-217ENST00000512274 LRP8Q14114 963 aa10.05□□□□□ -0.8
PDLIM5-217ENST00000512274 SPRED3Q2MJR0 410 aa10.05□□□□□ -0.8
PDLIM5-217ENST00000512274 SLC6A19Q695T7 634 aa10.05□□□□□ -0.8
PDLIM5-217ENST00000512274 GALNT13Q8IUC8 556 aa10.05□□□□□ -0.8
PDLIM5-217ENST00000512274 CISD2Q8N5K1 135 aaKnown RBP10.05□□□□□ -0.8
PDLIM5-217ENST00000512274 HMGCLL1Q8TB92 370 aa10.05□□□□□ -0.8
PDLIM5-217ENST00000512274 TRPC4APQ8TEL6 797 aa10.05□□□□□ -0.8
PDLIM5-217ENST00000512274 TSPEARQ8WU66 669 aa10.05□□□□□ -0.8
PDLIM5-217ENST00000512274 TWIST2Q8WVJ9 160 aa10.05□□□□□ -0.8
PDLIM5-217ENST00000512274 EXT2Q93063 718 aa10.05□□□□□ -0.8
PDLIM5-217ENST00000512274 CMTM5Q96DZ9 223 aa10.05□□□□□ -0.8
PDLIM5-217ENST00000512274 WDR34Q96EX3 536 aa10.05□□□□□ -0.8
PDLIM5-217ENST00000512274 THOC1Q96FV9 657 aaKnown RBP10.05□□□□□ -0.8
PDLIM5-217ENST00000512274 NSL1Q96IY1 281 aa10.05□□□□□ -0.8
PDLIM5-217ENST00000512274 RILPQ96NA2 401 aa10.05□□□□□ -0.8
PDLIM5-217ENST00000512274 NSUN5Q96P11 429 aaKnown RBP10.05□□□□□ -0.8
PDLIM5-217ENST00000512274 OR52B2Q96RD2 323 aa10.05□□□□□ -0.8
PDLIM5-217ENST00000512274 DPYSL5Q9BPU6 564 aa10.05□□□□□ -0.8
PDLIM5-217ENST00000512274 NUF2Q9BZD4 464 aa10.05□□□□□ -0.8
PDLIM5-217ENST00000512274 MMADHCQ9H3L0 296 aaPredicted RBP10.05□□□□□ -0.8
PDLIM5-217ENST00000512274 EHD1Q9H4M9 534 aa10.05□□□□□ -0.8
PDLIM5-217ENST00000512274 RUBCNLQ9H714 662 aa10.05□□□□□ -0.8
PDLIM5-217ENST00000512274 CARS2Q9HA77 564 aaKnown RBP10.05□□□□□ -0.8
PDLIM5-217ENST00000512274 TNFRSF12AQ9NP84 129 aa10.05□□□□□ -0.8
PDLIM5-217ENST00000512274 SPATA7Q9P0W8 599 aa10.05□□□□□ -0.8
PDLIM5-217ENST00000512274 RRP15Q9Y3B9 282 aaKnown RBP10.05□□□□□ -0.8
PDLIM5-217ENST00000512274 TSC22D4Q9Y3Q8 395 aa10.05□□□□□ -0.8
PDLIM5-217ENST00000512274 ASB1Q9Y576 335 aa10.05□□□□□ -0.8
PDLIM5-217ENST00000512274 PCYT1BQ9Y5K3 369 aaPredicted RBP10.05□□□□□ -0.8
PDLIM5-217ENST00000512274 PCSK5Q92824 1860 aa10.04□□□□□ -0.8
PDLIM5-217ENST00000512274 PRSS38A1L453 326 aa10.04□□□□□ -0.8
PDLIM5-217ENST00000512274 ZNF839A8K0R7 811 aa10.04□□□□□ -0.8
PDLIM5-217ENST00000512274 DPM1O60762 260 aa10.04□□□□□ -0.8
PDLIM5-217ENST00000512274 EPORP19235 508 aa10.04□□□□□ -0.8
PDLIM5-217ENST00000512274 PRPH2P23942 346 aa10.04□□□□□ -0.8
PDLIM5-217ENST00000512274 VARSP26640 1264 aaKnown RBP10.04□□□□□ -0.8
PDLIM5-217ENST00000512274 SQSTM1Q13501 440 aa10.04□□□□□ -0.8
PDLIM5-217ENST00000512274 MAP7Q14244 749 aa10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 85.3 ms