RNA–Protein interactions for RNA: ENST00000512151.5

NUP54-211, Transcript of nucleoporin 54, humanhuman

TSL 2

Gene NUP54, Length 1,385 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-211ENST00000512151 FAM166BA8MTA8 275 aa8.52□□□□□ -1.05
NUP54-211ENST00000512151 APOC4-APOC2K7ER74 178 aa8.52□□□□□ -1.05
NUP54-211ENST00000512151 SLC16A5O15375 505 aa8.52□□□□□ -1.05
NUP54-211ENST00000512151 P2RX6O15547 441 aa8.52□□□□□ -1.05
NUP54-211ENST00000512151 PRPF4O43172 522 aaKnown RBP eCLIP8.52□□□□□ -1.05
NUP54-211ENST00000512151 URI1O94763 535 aaPredicted RBP8.52□□□□□ -1.05
NUP54-211ENST00000512151 TJP3O95049 919 aa8.52□□□□□ -1.05
NUP54-211ENST00000512151 CNOT4O95628 575 aaKnown RBP8.52□□□□□ -1.05
NUP54-211ENST00000512151 AGTP01019 485 aa8.52□□□□□ -1.05
NUP54-211ENST00000512151 APOC2P02655 101 aa8.52□□□□□ -1.05
NUP54-211ENST00000512151 ANXA5P08758 320 aa8.52□□□□□ -1.05
NUP54-211ENST00000512151 ZFXP17010 805 aaPredicted RBP8.52□□□□□ -1.05
NUP54-211ENST00000512151 BMP7P18075 431 aa8.52□□□□□ -1.05
NUP54-211ENST00000512151 ACRV1P26436 265 aa8.52□□□□□ -1.05
NUP54-211ENST00000512151 PEX19P40855 299 aa8.52□□□□□ -1.05
NUP54-211ENST00000512151 CETN2P41208 172 aa8.52□□□□□ -1.05
NUP54-211ENST00000512151 CYB561P49447 251 aa8.52□□□□□ -1.05
NUP54-211ENST00000512151 CSE1LP55060 971 aaKnown RBP8.52□□□□□ -1.05
NUP54-211ENST00000512151 MLF1P58340 268 aa8.52□□□□□ -1.05
NUP54-211ENST00000512151 WASHC5Q12768 1159 aa8.52□□□□□ -1.05
NUP54-211ENST00000512151 MSLNQ13421 630 aaPredicted RBP8.52□□□□□ -1.05
NUP54-211ENST00000512151 TAF1AQ15573 450 aaPredicted RBP8.52□□□□□ -1.05
NUP54-211ENST00000512151 EXT1Q16394 746 aa8.52□□□□□ -1.05
NUP54-211ENST00000512151 SFT2D3Q587I9 215 aa8.52□□□□□ -1.05
NUP54-211ENST00000512151 LRRC8BQ6P9F7 803 aa8.52□□□□□ -1.05
NUP54-211ENST00000512151 PAPD4Q6PIY7 484 aaKnown RBP8.52□□□□□ -1.05
NUP54-211ENST00000512151 MDGA2Q7Z553 956 aa8.52□□□□□ -1.05
NUP54-211ENST00000512151 SNX20Q7Z614 316 aa8.52□□□□□ -1.05
NUP54-211ENST00000512151 PIANPQ8IYJ0 282 aa8.52□□□□□ -1.05
NUP54-211ENST00000512151 CSNK1A1LQ8N752 337 aa8.52□□□□□ -1.05
NUP54-211ENST00000512151 PRELID2Q8N945 189 aa8.52□□□□□ -1.05
NUP54-211ENST00000512151 NAXEQ8NCW5 288 aa8.52□□□□□ -1.05
NUP54-211ENST00000512151 C1orf54Q8WWF1 131 aa8.52□□□□□ -1.05
NUP54-211ENST00000512151 ATG4AQ8WYN0 398 aa8.52□□□□□ -1.05
NUP54-211ENST00000512151 ELMO1Q92556 727 aa8.52□□□□□ -1.05
NUP54-211ENST00000512151 P3H4Q92791 437 aa8.52□□□□□ -1.05
NUP54-211ENST00000512151 SLC22A18Q96BI1 424 aa8.52□□□□□ -1.05
NUP54-211ENST00000512151 MVB12AQ96EY5 273 aa8.52□□□□□ -1.05
NUP54-211ENST00000512151 PERPQ96FX8 193 aa8.52□□□□□ -1.05
NUP54-211ENST00000512151 PIP5K1AQ99755 562 aa8.52□□□□□ -1.05
NUP54-211ENST00000512151 VPS37BQ9H9H4 285 aa8.52□□□□□ -1.05
NUP54-211ENST00000512151 KLF13Q9Y2Y9 288 aaPredicted RBP8.52□□□□□ -1.05
NUP54-211ENST00000512151 ARHGAP21Q5T5U3 1957 aa8.52□□□□□ -1.05
NUP54-211ENST00000512151 MEGF8Q7Z7M0 2845 aa8.52□□□□□ -1.05
NUP54-211ENST00000512151 A0A0G2JMM0 328 aa8.51□□□□□ -1.05
NUP54-211ENST00000512151 A0A1W2PPB8 328 aa8.51□□□□□ -1.05
NUP54-211ENST00000512151 A0A1W2PPV9 198 aa8.51□□□□□ -1.05
NUP54-211ENST00000512151 A0A1W2PRS3 328 aa8.51□□□□□ -1.05
NUP54-211ENST00000512151 KIR3DP1A8MWS1 328 aa8.51□□□□□ -1.05
NUP54-211ENST00000512151 KDM4EB2RXH2 506 aaPredicted RBP8.51□□□□□ -1.05
NUP54-211ENST00000512151 CLDN4O14493 209 aa8.51□□□□□ -1.05
NUP54-211ENST00000512151 LIASO43766 372 aa8.51□□□□□ -1.05
NUP54-211ENST00000512151 IFNA2P01563 188 aa8.51□□□□□ -1.05
NUP54-211ENST00000512151 ERVK-10P10266 1014 aa8.51□□□□□ -1.05
NUP54-211ENST00000512151 ITGALP20701 1170 aa8.51□□□□□ -1.05
NUP54-211ENST00000512151 RBL1P28749 1068 aa8.51□□□□□ -1.05
NUP54-211ENST00000512151 TRHRP34981 398 aaPredicted RBP8.51□□□□□ -1.05
NUP54-211ENST00000512151 NR2C2P49116 596 aa8.51□□□□□ -1.05
NUP54-211ENST00000512151 ASCL1P50553 236 aa8.51□□□□□ -1.05
NUP54-211ENST00000512151 HLCSP50747 726 aa8.51□□□□□ -1.05
NUP54-211ENST00000512151 ZNF140P52738 457 aaPredicted RBP8.51□□□□□ -1.05
NUP54-211ENST00000512151 SLC26A5P58743 744 aa8.51□□□□□ -1.05
NUP54-211ENST00000512151 SNX1Q13596 522 aa8.51□□□□□ -1.05
NUP54-211ENST00000512151 CAPRIN1Q14444 709 aaKnown RBP8.51□□□□□ -1.05
NUP54-211ENST00000512151 USP10Q14694 798 aaKnown RBP8.51□□□□□ -1.05
NUP54-211ENST00000512151 DBN1Q16643 649 aa8.51□□□□□ -1.05
NUP54-211ENST00000512151 FBXL19-AS1Q494R0 122 aa8.51□□□□□ -1.05
NUP54-211ENST00000512151 MINDY4Q4G0A6 757 aa8.51□□□□□ -1.05
NUP54-211ENST00000512151 C10orf62Q5T681 223 aaPredicted RBP8.51□□□□□ -1.05
NUP54-211ENST00000512151 C1orf185Q5T7R7 199 aa8.51□□□□□ -1.05
NUP54-211ENST00000512151 RIPPLY2Q5TAB7 128 aa8.51□□□□□ -1.05
NUP54-211ENST00000512151 MFSD4BQ5TF39 518 aa8.51□□□□□ -1.05
NUP54-211ENST00000512151 TTC27Q6P3X3 843 aa8.51□□□□□ -1.05
NUP54-211ENST00000512151 POMZP3Q6PJE2 187 aa8.51□□□□□ -1.05
NUP54-211ENST00000512151 PRSS41Q7RTY9 318 aa8.51□□□□□ -1.05
NUP54-211ENST00000512151 OR2L3Q8NG85 312 aa8.51□□□□□ -1.05
NUP54-211ENST00000512151 PPP1R14CQ8TAE6 165 aa8.51□□□□□ -1.05
NUP54-211ENST00000512151 SLC35B2Q8TB61 432 aa8.51□□□□□ -1.05
NUP54-211ENST00000512151 ELP5Q8TE02 316 aa8.51□□□□□ -1.05
NUP54-211ENST00000512151 HEXDCQ8WVB3 486 aa8.51□□□□□ -1.05
NUP54-211ENST00000512151 SPATA13Q96N96 652 aa8.51□□□□□ -1.05
NUP54-211ENST00000512151 SMC6Q96SB8 1091 aa8.51□□□□□ -1.05
NUP54-211ENST00000512151 GORASP1Q9BQQ3 440 aa8.51□□□□□ -1.05
NUP54-211ENST00000512151 ZDHHC11Q9H8X9 412 aa8.51□□□□□ -1.05
NUP54-211ENST00000512151 C19orf25Q9UFG5 118 aaPredicted RBP8.51□□□□□ -1.05
NUP54-211ENST00000512151 NPFFR2Q9Y5X5 522 aa8.51□□□□□ -1.05
NUP54-211ENST00000512151 HEATR5BQ9P2D3 2071 aa8.51□□□□□ -1.05
NUP54-211ENST00000512151 TUBAL3A6NHL2 446 aa8.5□□□□□ -1.05
NUP54-211ENST00000512151 FIGNL2A6NMB9 653 aa8.5□□□□□ -1.05
NUP54-211ENST00000512151 C2orf81A6NN90 581 aa8.5□□□□□ -1.05
NUP54-211ENST00000512151 KLRC4-KLRK1H3BQV0 150 aa8.5□□□□□ -1.05
NUP54-211ENST00000512151 PGRMC1O00264 195 aaKnown RBP8.5□□□□□ -1.05
NUP54-211ENST00000512151 STATHP02808 62 aa8.5□□□□□ -1.05
NUP54-211ENST00000512151 GSTM1P09488 218 aa8.5□□□□□ -1.05
NUP54-211ENST00000512151 RBP3P10745 1247 aa8.5□□□□□ -1.05
NUP54-211ENST00000512151 BMP5P22003 454 aa8.5□□□□□ -1.05
NUP54-211ENST00000512151 MC4RP32245 332 aa8.5□□□□□ -1.05
NUP54-211ENST00000512151 KCNJ1P48048 391 aa8.5□□□□□ -1.05
NUP54-211ENST00000512151 GDF10P55107 478 aa8.5□□□□□ -1.05
NUP54-211ENST00000512151 WNT3P56703 355 aa8.5□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms