RNA–Protein interactions for RNA: ENST00000512040.1

MATR3-219, Transcript of matrin 3, humanhuman

TSL 3

Gene MATR3, Length 642 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MATR3-219ENST00000512040 PLEKP08567 350 aaPredicted RBP4.28□□□□□ -1.72
MATR3-219ENST00000512040 INHBBP09529 407 aa4.28□□□□□ -1.72
MATR3-219ENST00000512040 H2AFXP16104 143 aaPredicted RBP4.28□□□□□ -1.72
MATR3-219ENST00000512040 UCP1P25874 307 aa4.28□□□□□ -1.72
MATR3-219ENST00000512040 POU1F1P28069 291 aa4.28□□□□□ -1.72
MATR3-219ENST00000512040 CD52P31358 61 aa4.28□□□□□ -1.72
MATR3-219ENST00000512040 SSTR4P31391 388 aa4.28□□□□□ -1.72
MATR3-219ENST00000512040 SOAT1P35610 550 aa4.28□□□□□ -1.72
MATR3-219ENST00000512040 PGM1P36871 562 aa4.28□□□□□ -1.72
MATR3-219ENST00000512040 QARSP47897 775 aaKnown RBP4.28□□□□□ -1.72
MATR3-219ENST00000512040 NRIP1P48552 1158 aa4.28□□□□□ -1.72
MATR3-219ENST00000512040 NPY2RP49146 381 aa4.28□□□□□ -1.72
MATR3-219ENST00000512040 CDC34P49427 236 aaPredicted RBP4.28□□□□□ -1.72
MATR3-219ENST00000512040 CCR4P51679 360 aa4.28□□□□□ -1.72
MATR3-219ENST00000512040 IST1P53990 364 aa4.28□□□□□ -1.72
MATR3-219ENST00000512040 SOX8P57073 446 aa4.28□□□□□ -1.72
MATR3-219ENST00000512040 DAOAP59103 153 aa4.28□□□□□ -1.72
MATR3-219ENST00000512040 ACTBP60709 375 aa4.28□□□□□ -1.72
MATR3-219ENST00000512040 ARF6P62330 175 aa4.28□□□□□ -1.72
MATR3-219ENST00000512040 ACTA2P62736 377 aa4.28□□□□□ -1.72
MATR3-219ENST00000512040 ACTG1P63261 375 aa4.28□□□□□ -1.72
MATR3-219ENST00000512040 ACTG2P63267 376 aa4.28□□□□□ -1.72
MATR3-219ENST00000512040 ACTC1P68032 377 aa4.28□□□□□ -1.72
MATR3-219ENST00000512040 ACTA1P68133 377 aa4.28□□□□□ -1.72
MATR3-219ENST00000512040 ECT2LQ008S8 904 aa4.28□□□□□ -1.72
MATR3-219ENST00000512040 SRSF2Q01130 221 aaKnown RBP4.28□□□□□ -1.72
MATR3-219ENST00000512040 RAD51Q06609 339 aa4.28□□□□□ -1.72
MATR3-219ENST00000512040 NFYCQ13952 458 aa4.28□□□□□ -1.72
MATR3-219ENST00000512040 DRAP1Q14919 205 aaPredicted RBP4.28□□□□□ -1.72
MATR3-219ENST00000512040 PDK2Q15119 407 aa4.28□□□□□ -1.72
MATR3-219ENST00000512040 PDK3Q15120 406 aa4.28□□□□□ -1.72
MATR3-219ENST00000512040 GOLGA7BQ2TAP0 167 aa4.28□□□□□ -1.72
MATR3-219ENST00000512040 CHRFAM7AQ494W8 412 aa4.28□□□□□ -1.72
MATR3-219ENST00000512040 GXYLT1Q4G148 440 aa4.28□□□□□ -1.72
MATR3-219ENST00000512040 TMEM177Q53S58 311 aa4.28□□□□□ -1.72
MATR3-219ENST00000512040 ZNF789Q5FWF6 425 aa4.28□□□□□ -1.72
MATR3-219ENST00000512040 LCE4AQ5TA78 99 aa4.28□□□□□ -1.72
MATR3-219ENST00000512040 CDKAL1Q5VV42 579 aa4.28□□□□□ -1.72
MATR3-219ENST00000512040 LRRC66Q68CR7 880 aa4.28□□□□□ -1.72
MATR3-219ENST00000512040 DUS1LQ6P1R4 473 aaKnown RBP4.28□□□□□ -1.72
MATR3-219ENST00000512040 PRSS57Q6UWY2 283 aa4.28□□□□□ -1.72
MATR3-219ENST00000512040 KCNK18Q7Z418 384 aa4.28□□□□□ -1.72
MATR3-219ENST00000512040 TRMT11Q7Z4G4 463 aaKnown RBP4.28□□□□□ -1.72
MATR3-219ENST00000512040 ADCK2Q7Z695 626 aa4.28□□□□□ -1.72
MATR3-219ENST00000512040 ZSCAN2Q7Z7L9 614 aaPredicted RBP4.28□□□□□ -1.72
MATR3-219ENST00000512040 ZNF410Q86VK4 478 aa4.28□□□□□ -1.72
MATR3-219ENST00000512040 DHX40Q8IX18 779 aaKnown RBP4.28□□□□□ -1.72
MATR3-219ENST00000512040 LRRC56Q8IYG6 542 aaPredicted RBP4.28□□□□□ -1.72
MATR3-219ENST00000512040 RCOR2Q8IZ40 523 aa4.28□□□□□ -1.72
MATR3-219ENST00000512040 ABI1Q8IZP0 508 aa4.28□□□□□ -1.72
MATR3-219ENST00000512040 BATF2Q8N1L9 274 aa4.28□□□□□ -1.72
MATR3-219ENST00000512040 THEM5Q8N1Q8 247 aa4.28□□□□□ -1.72
MATR3-219ENST00000512040 UBE2J2Q8N2K1 259 aa4.28□□□□□ -1.72
MATR3-219ENST00000512040 MINDY1Q8N5J2 469 aa4.28□□□□□ -1.72
MATR3-219ENST00000512040 SLC15A4Q8N697 577 aa4.28□□□□□ -1.72
MATR3-219ENST00000512040 FAM47BQ8NA70 645 aa4.28□□□□□ -1.72
MATR3-219ENST00000512040 OR5M1Q8NGP8 315 aa4.28□□□□□ -1.72
MATR3-219ENST00000512040 OR1N1Q8NGS0 311 aa4.28□□□□□ -1.72
MATR3-219ENST00000512040 PCDH19Q8TAB3 1148 aa4.28□□□□□ -1.72
MATR3-219ENST00000512040 SNX19Q92543 992 aa4.28□□□□□ -1.72
MATR3-219ENST00000512040 RSC1A1Q92681 617 aa4.28□□□□□ -1.72
MATR3-219ENST00000512040 KAT2AQ92830 837 aa4.28□□□□□ -1.72
MATR3-219ENST00000512040 KIAA1143Q96AT1 154 aaPredicted RBP4.28□□□□□ -1.72
MATR3-219ENST00000512040 DACT3Q96B18 629 aaPredicted RBP4.28□□□□□ -1.72
MATR3-219ENST00000512040 DYDC2Q96IM9 177 aa4.28□□□□□ -1.72
MATR3-219ENST00000512040 C9orf72Q96LT7 481 aa4.28□□□□□ -1.72
MATR3-219ENST00000512040 Q96M66 194 aa4.28□□□□□ -1.72
MATR3-219ENST00000512040 LRRC37BQ96QE4 947 aa4.28□□□□□ -1.72
MATR3-219ENST00000512040 TRIB1Q96RU8 372 aa4.28□□□□□ -1.72
MATR3-219ENST00000512040 HAPLN3Q96S86 360 aa4.28□□□□□ -1.72
MATR3-219ENST00000512040 DPYSL5Q9BPU6 564 aa4.28□□□□□ -1.72
MATR3-219ENST00000512040 FDXACB1Q9BRP7 624 aaPredicted RBP4.28□□□□□ -1.72
MATR3-219ENST00000512040 CENPKQ9BS16 269 aa4.28□□□□□ -1.72
MATR3-219ENST00000512040 NUP58Q9BVL2 599 aa4.28□□□□□ -1.72
MATR3-219ENST00000512040 ZNF416Q9BWM5 594 aa4.28□□□□□ -1.72
MATR3-219ENST00000512040 ASPNQ9BXN1 380 aa4.28□□□□□ -1.72
MATR3-219ENST00000512040 MRPL13Q9BYD1 178 aaKnown RBP4.28□□□□□ -1.72
MATR3-219ENST00000512040 HOXD1Q9GZZ0 328 aa4.28□□□□□ -1.72
MATR3-219ENST00000512040 DDX47Q9H0S4 455 aaKnown RBP4.28□□□□□ -1.72
MATR3-219ENST00000512040 RAB17Q9H0T7 212 aa4.28□□□□□ -1.72
MATR3-219ENST00000512040 EPC1Q9H2F5 836 aa4.28□□□□□ -1.72
MATR3-219ENST00000512040 MMP27Q9H306 513 aa4.28□□□□□ -1.72
MATR3-219ENST00000512040 NSUN3Q9H649 340 aaKnown RBP4.28□□□□□ -1.72
MATR3-219ENST00000512040 CAB39LQ9H9S4 337 aa4.28□□□□□ -1.72
MATR3-219ENST00000512040 FN3KRPQ9HA64 309 aa4.28□□□□□ -1.72
MATR3-219ENST00000512040 KCNMB3Q9NPA1 279 aa4.28□□□□□ -1.72
MATR3-219ENST00000512040 GPRC5CQ9NQ84 441 aa4.28□□□□□ -1.72
MATR3-219ENST00000512040 RGS18Q9NS28 235 aa4.28□□□□□ -1.72
MATR3-219ENST00000512040 SAMSN1Q9NSI8 373 aaKnown RBP4.28□□□□□ -1.72
MATR3-219ENST00000512040 ZNF701Q9NV72 531 aaPredicted RBP4.28□□□□□ -1.72
MATR3-219ENST00000512040 PARVAQ9NVD7 372 aa4.28□□□□□ -1.72
MATR3-219ENST00000512040 DNAJC17Q9NVM6 304 aaKnown RBP4.28□□□□□ -1.72
MATR3-219ENST00000512040 PARPBPQ9NWS1 579 aa4.28□□□□□ -1.72
MATR3-219ENST00000512040 TMEM161AQ9NX61 479 aa4.28□□□□□ -1.72
MATR3-219ENST00000512040 ZDHHC7Q9NXF8 308 aa4.28□□□□□ -1.72
MATR3-219ENST00000512040 PTTG2Q9NZH5 202 aa4.28□□□□□ -1.72
MATR3-219ENST00000512040 H2AFY2Q9P0M6 372 aaPredicted RBP4.28□□□□□ -1.72
MATR3-219ENST00000512040 DNAJB11Q9UBS4 358 aa4.28□□□□□ -1.72
MATR3-219ENST00000512040 DKK4Q9UBT3 224 aa4.28□□□□□ -1.72
MATR3-219ENST00000512040 SHOC2Q9UQ13 582 aa4.28□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms