RNA–Protein interactions for RNA: ENST00000512009.5

TRAPPC13-211, Transcript of trafficking protein particle complex 13, humanhuman

TSL 2

Gene TRAPPC13, Length 5,994 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-211ENST00000512009 ILF3Q12906 894 aaKnown RBP eCLIP1.59□□□□□ -2.15
TRAPPC13-211ENST00000512009 EPS8Q12929 822 aa1.59□□□□□ -2.15
TRAPPC13-211ENST00000512009 SGCGQ13326 291 aa1.59□□□□□ -2.15
TRAPPC13-211ENST00000512009 CUL2Q13617 745 aa1.59□□□□□ -2.15
TRAPPC13-211ENST00000512009 INPP5AQ14642 412 aa1.59□□□□□ -2.15
TRAPPC13-211ENST00000512009 LPIN1Q14693 890 aa1.59□□□□□ -2.15
TRAPPC13-211ENST00000512009 KPNB1Q14974 876 aaKnown RBP1.59□□□□□ -2.15
TRAPPC13-211ENST00000512009 ATP6AP1Q15904 470 aa1.59□□□□□ -2.15
TRAPPC13-211ENST00000512009 PTPROQ16827 1216 aa1.59□□□□□ -2.15
TRAPPC13-211ENST00000512009 ABCB5Q2M3G0 1257 aa1.59□□□□□ -2.15
TRAPPC13-211ENST00000512009 TYSND1Q2T9J0 566 aa1.59□□□□□ -2.15
TRAPPC13-211ENST00000512009 GRAMD1BQ3KR37 738 aa1.59□□□□□ -2.15
TRAPPC13-211ENST00000512009 BRMS1LQ5PSV4 323 aa1.59□□□□□ -2.15
TRAPPC13-211ENST00000512009 RBM48Q5RL73 367 aaKnown RBP1.59□□□□□ -2.15
TRAPPC13-211ENST00000512009 LCE2AQ5TA79 106 aaPredicted RBP1.59□□□□□ -2.15
TRAPPC13-211ENST00000512009 RETSATQ6NUM9 610 aa1.59□□□□□ -2.15
TRAPPC13-211ENST00000512009 FAM199XQ6PEV8 388 aaPredicted RBP1.59□□□□□ -2.15
TRAPPC13-211ENST00000512009 ZNF773Q6PK81 442 aa1.59□□□□□ -2.15
TRAPPC13-211ENST00000512009 FIP1L1Q6UN15 594 aaKnown RBP1.59□□□□□ -2.15
TRAPPC13-211ENST00000512009 ASB18Q6ZVZ8 466 aa1.59□□□□□ -2.15
TRAPPC13-211ENST00000512009 SPATA21Q7Z572 469 aa1.59□□□□□ -2.15
TRAPPC13-211ENST00000512009 ZC3H7AQ8IWR0 971 aaKnown RBP1.59□□□□□ -2.15
TRAPPC13-211ENST00000512009 ZZZ3Q8IYH5 903 aa1.59□□□□□ -2.15
TRAPPC13-211ENST00000512009 DCP1BQ8IZD4 617 aaKnown RBP1.59□□□□□ -2.15
TRAPPC13-211ENST00000512009 ZNF548Q8NEK5 533 aaPredicted RBP1.59□□□□□ -2.15
TRAPPC13-211ENST00000512009 OR5D16Q8NGK9 328 aa1.59□□□□□ -2.15
TRAPPC13-211ENST00000512009 METTL6Q8TCB7 284 aa1.59□□□□□ -2.15
TRAPPC13-211ENST00000512009 SPRYD4Q8WW59 207 aaPredicted RBP1.59□□□□□ -2.15
TRAPPC13-211ENST00000512009 GIMAP1Q8WWP7 306 aa1.59□□□□□ -2.15
TRAPPC13-211ENST00000512009 POP5Q969H6 163 aaKnown RBP1.59□□□□□ -2.15
TRAPPC13-211ENST00000512009 SLC22A18Q96BI1 424 aa1.59□□□□□ -2.15
TRAPPC13-211ENST00000512009 THAP11Q96EK4 314 aa1.59□□□□□ -2.15
TRAPPC13-211ENST00000512009 ARL5BQ96KC2 179 aa1.59□□□□□ -2.15
TRAPPC13-211ENST00000512009 NECTIN4Q96NY8 510 aa1.59□□□□□ -2.15
TRAPPC13-211ENST00000512009 GAS2L1Q99501 681 aaPredicted RBP1.59□□□□□ -2.15
TRAPPC13-211ENST00000512009 HEPHQ9BQS7 1158 aa1.59□□□□□ -2.15
TRAPPC13-211ENST00000512009 ZNF251Q9BRH9 671 aa1.59□□□□□ -2.15
TRAPPC13-211ENST00000512009 RTKNQ9BST9 563 aa1.59□□□□□ -2.15
TRAPPC13-211ENST00000512009 FSD1LQ9BXM9 530 aa1.59□□□□□ -2.15
TRAPPC13-211ENST00000512009 SLC26A6Q9BXS9 759 aa1.59□□□□□ -2.15
TRAPPC13-211ENST00000512009 WDR11Q9BZH6 1224 aa1.59□□□□□ -2.15
TRAPPC13-211ENST00000512009 MTMR12Q9C0I1 747 aa1.59□□□□□ -2.15
TRAPPC13-211ENST00000512009 SP140LQ9H930 580 aa1.59□□□□□ -2.15
TRAPPC13-211ENST00000512009 SIAEQ9HAT2 523 aa1.59□□□□□ -2.15
TRAPPC13-211ENST00000512009 ZFP14Q9HCL3 533 aa1.59□□□□□ -2.15
TRAPPC13-211ENST00000512009 RASSF1Q9NS23 344 aa1.59□□□□□ -2.15
TRAPPC13-211ENST00000512009 ACOXLQ9NUZ1 547 aa1.59□□□□□ -2.15
TRAPPC13-211ENST00000512009 TMLHEQ9NVH6 421 aa1.59□□□□□ -2.15
TRAPPC13-211ENST00000512009 GIN1Q9NXP7 522 aa1.59□□□□□ -2.15
TRAPPC13-211ENST00000512009 TMEM216Q9P0N5 145 aa1.59□□□□□ -2.15
TRAPPC13-211ENST00000512009 IFT80Q9P2H3 777 aaPredicted RBP1.59□□□□□ -2.15
TRAPPC13-211ENST00000512009 UXTQ9UBK9 157 aaPredicted RBP1.59□□□□□ -2.15
TRAPPC13-211ENST00000512009 ENPP5Q9UJA9 477 aa1.59□□□□□ -2.15
TRAPPC13-211ENST00000512009 UGT2A1Q9Y4X1 527 aa1.59□□□□□ -2.15
TRAPPC13-211ENST00000512009 PCDHGC4Q9Y5F7 938 aa1.59□□□□□ -2.15
TRAPPC13-211ENST00000512009 PCDHGA8Q9Y5G5 932 aa1.59□□□□□ -2.15
TRAPPC13-211ENST00000512009 PEX16Q9Y5Y5 336 aa1.59□□□□□ -2.15
TRAPPC13-211ENST00000512009 CFAP20Q9Y6A4 193 aaKnown RBP1.59□□□□□ -2.15
TRAPPC13-211ENST00000512009 BORCS7-ASMTA0A0B4J1R7 106 aa1.59□□□□□ -2.16
TRAPPC13-211ENST00000512009 TMEM272A0A1B0GTI8 110 aa1.59□□□□□ -2.16
TRAPPC13-211ENST00000512009 APOL1O14791 398 aa1.59□□□□□ -2.16
TRAPPC13-211ENST00000512009 CASC3O15234 703 aaKnown RBP1.59□□□□□ -2.16
TRAPPC13-211ENST00000512009 SLC28A2O43868 658 aa1.59□□□□□ -2.16
TRAPPC13-211ENST00000512009 PRPSAP2O60256 369 aa1.59□□□□□ -2.16
TRAPPC13-211ENST00000512009 SRSF10O75494 262 aaKnown RBP1.59□□□□□ -2.16
TRAPPC13-211ENST00000512009 CLN5O75503 358 aa1.59□□□□□ -2.16
TRAPPC13-211ENST00000512009 GPX5O75715 221 aa1.59□□□□□ -2.16
TRAPPC13-211ENST00000512009 CEACAM4O75871 244 aa1.59□□□□□ -2.16
TRAPPC13-211ENST00000512009 TSPAN9O75954 239 aa1.59□□□□□ -2.16
TRAPPC13-211ENST00000512009 AGTP01019 485 aa1.59□□□□□ -2.16
TRAPPC13-211ENST00000512009 MYCP01106 439 aaPredicted RBP1.59□□□□□ -2.16
TRAPPC13-211ENST00000512009 CLPSP04118 112 aa1.59□□□□□ -2.16
TRAPPC13-211ENST00000512009 HRGP04196 525 aa1.59□□□□□ -2.16
TRAPPC13-211ENST00000512009 RLN1P04808 185 aa1.59□□□□□ -2.16
TRAPPC13-211ENST00000512009 CYP11A1P05108 521 aa1.59□□□□□ -2.16
TRAPPC13-211ENST00000512009 LPLP06858 475 aa1.59□□□□□ -2.16
TRAPPC13-211ENST00000512009 HEXAP06865 529 aa1.59□□□□□ -2.16
TRAPPC13-211ENST00000512009 NR3C2P08235 984 aa1.59□□□□□ -2.16
TRAPPC13-211ENST00000512009 FGF4P08620 206 aa1.59□□□□□ -2.16
TRAPPC13-211ENST00000512009 TFPTP0C1Z6 253 aa1.59□□□□□ -2.16
TRAPPC13-211ENST00000512009 ALPPL2P10696 532 aa1.59□□□□□ -2.16
TRAPPC13-211ENST00000512009 UGT1A6P19224 532 aa1.59□□□□□ -2.16
TRAPPC13-211ENST00000512009 POLR2EP19388 210 aaKnown RBP1.59□□□□□ -2.16
TRAPPC13-211ENST00000512009 NR4A1P22736 598 aa1.59□□□□□ -2.16
TRAPPC13-211ENST00000512009 TCEA1P23193 301 aaKnown RBP1.59□□□□□ -2.16
TRAPPC13-211ENST00000512009 DDX6P26196 483 aaKnown RBP eCLIP1.59□□□□□ -2.16
TRAPPC13-211ENST00000512009 AOAHP28039 575 aa1.59□□□□□ -2.16
TRAPPC13-211ENST00000512009 TEAD1P28347 426 aa1.59□□□□□ -2.16
TRAPPC13-211ENST00000512009 AFMP43652 599 aa1.59□□□□□ -2.16
TRAPPC13-211ENST00000512009 MAPK8P45983 427 aa1.59□□□□□ -2.16
TRAPPC13-211ENST00000512009 RABIFP47224 123 aa1.59□□□□□ -2.16
TRAPPC13-211ENST00000512009 CCR3P51677 355 aa1.59□□□□□ -2.16
TRAPPC13-211ENST00000512009 RIDAP52758 137 aaKnown RBP1.59□□□□□ -2.16
TRAPPC13-211ENST00000512009 CRISP1P54107 249 aa1.59□□□□□ -2.16
TRAPPC13-211ENST00000512009 GBE1Q04446 702 aa1.59□□□□□ -2.16
TRAPPC13-211ENST00000512009 KLHL30Q0D2K2 578 aa1.59□□□□□ -2.16
TRAPPC13-211ENST00000512009 BST2Q10589 180 aaKnown RBP1.59□□□□□ -2.16
TRAPPC13-211ENST00000512009 SMAD1Q15797 465 aaKnown RBP1.59□□□□□ -2.16
TRAPPC13-211ENST00000512009 TIMM50Q3ZCQ8 353 aa1.59□□□□□ -2.16
TRAPPC13-211ENST00000512009 TIGD2Q4W5G0 525 aa1.59□□□□□ -2.16
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms