RNA–Protein interactions for RNA: ENST00000511955.5

TRAPPC11-208, Transcript of trafficking protein particle complex 11, humanhuman

TSL 2

Gene TRAPPC11, Length 2,342 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-208ENST00000511955 CA3P07451 260 aa4.84□□□□□ -1.63
TRAPPC11-208ENST00000511955 TCEA1P23193 301 aaKnown RBP4.84□□□□□ -1.63
TRAPPC11-208ENST00000511955 PRDX6P30041 224 aa4.84□□□□□ -1.63
TRAPPC11-208ENST00000511955 CD79BP40259 229 aa4.84□□□□□ -1.63
TRAPPC11-208ENST00000511955 NAMPTP43490 491 aa4.84□□□□□ -1.63
TRAPPC11-208ENST00000511955 PTENP60484 403 aa4.84□□□□□ -1.63
TRAPPC11-208ENST00000511955 SH3BP2P78314 561 aa4.84□□□□□ -1.63
TRAPPC11-208ENST00000511955 RHAGQ02094 409 aa4.84□□□□□ -1.63
TRAPPC11-208ENST00000511955 BDH1Q02338 343 aa4.84□□□□□ -1.63
TRAPPC11-208ENST00000511955 TOP3AQ13472 1001 aaPredicted RBP4.84□□□□□ -1.63
TRAPPC11-208ENST00000511955 PNOCQ13519 176 aa4.84□□□□□ -1.63
TRAPPC11-208ENST00000511955 NFYCQ13952 458 aa4.84□□□□□ -1.63
TRAPPC11-208ENST00000511955 UAP1Q16222 522 aaPredicted RBP4.84□□□□□ -1.63
TRAPPC11-208ENST00000511955 EEF1AKMT2Q5JPI9 291 aaKnown RBP4.84□□□□□ -1.63
TRAPPC11-208ENST00000511955 SPOUT1Q5T280 376 aaKnown RBP4.84□□□□□ -1.63
TRAPPC11-208ENST00000511955 ALS2CLQ60I27 953 aa4.84□□□□□ -1.63
TRAPPC11-208ENST00000511955 NADSYN1Q6IA69 706 aa4.84□□□□□ -1.63
TRAPPC11-208ENST00000511955 DGAT2L7PQ6IED9 249 aa4.84□□□□□ -1.63
TRAPPC11-208ENST00000511955 NAPEPLDQ6IQ20 393 aa4.84□□□□□ -1.63
TRAPPC11-208ENST00000511955 CDC73Q6P1J9 531 aa4.84□□□□□ -1.63
TRAPPC11-208ENST00000511955 Q7L0L9 218 aa4.84□□□□□ -1.63
TRAPPC11-208ENST00000511955 LINC00523Q86TU6 105 aa4.84□□□□□ -1.63
TRAPPC11-208ENST00000511955 C12orf40Q86WS4 652 aa4.84□□□□□ -1.63
TRAPPC11-208ENST00000511955 ECHDC2Q86YB7 292 aa4.84□□□□□ -1.63
TRAPPC11-208ENST00000511955 RASGRP3Q8IV61 690 aa4.84□□□□□ -1.63
TRAPPC11-208ENST00000511955 MCATQ8IVS2 390 aaKnown RBP4.84□□□□□ -1.63
TRAPPC11-208ENST00000511955 SVOPQ8N4V2 548 aa4.84□□□□□ -1.63
TRAPPC11-208ENST00000511955 C19orf18Q8NEA5 215 aa4.84□□□□□ -1.63
TRAPPC11-208ENST00000511955 OR56B1Q8NGI3 324 aa4.84□□□□□ -1.63
TRAPPC11-208ENST00000511955 LINC01599Q8WXQ3 324 aa4.84□□□□□ -1.63
TRAPPC11-208ENST00000511955 FIG4Q92562 907 aa4.84□□□□□ -1.63
TRAPPC11-208ENST00000511955 SLC25A36Q96CQ1 311 aa4.84□□□□□ -1.63
TRAPPC11-208ENST00000511955 AP2M1Q96CW1 435 aa4.84□□□□□ -1.63
TRAPPC11-208ENST00000511955 RMND5BQ96G75 393 aaPredicted RBP4.84□□□□□ -1.63
TRAPPC11-208ENST00000511955 PAGE5Q96GU1 130 aa4.84□□□□□ -1.63
TRAPPC11-208ENST00000511955 KLHL15Q96M94 604 aa4.84□□□□□ -1.63
TRAPPC11-208ENST00000511955 NSMCE3Q96MG7 304 aa4.84□□□□□ -1.63
TRAPPC11-208ENST00000511955 ZNF583Q96ND8 569 aa4.84□□□□□ -1.63
TRAPPC11-208ENST00000511955 CYP2S1Q96SQ9 504 aa4.84□□□□□ -1.63
TRAPPC11-208ENST00000511955 PNKPQ96T60 521 aa4.84□□□□□ -1.63
TRAPPC11-208ENST00000511955 DHRS9Q9BPW9 319 aa4.84□□□□□ -1.63
TRAPPC11-208ENST00000511955 TRIM9Q9C026 710 aa4.84□□□□□ -1.63
TRAPPC11-208ENST00000511955 HAO2Q9NYQ3 351 aa4.84□□□□□ -1.63
TRAPPC11-208ENST00000511955 STOML1Q9UBI4 398 aa4.84□□□□□ -1.63
TRAPPC11-208ENST00000511955 NIPSNAP3AQ9UFN0 247 aaPredicted RBP4.84□□□□□ -1.63
TRAPPC11-208ENST00000511955 TBC1D24Q9ULP9 559 aa4.84□□□□□ -1.63
TRAPPC11-208ENST00000511955 CNTN6Q9UQ52 1028 aa4.84□□□□□ -1.63
TRAPPC11-208ENST00000511955 RCE1Q9Y256 329 aa4.84□□□□□ -1.63
TRAPPC11-208ENST00000511955 ARID2Q68CP9 1835 aa4.84□□□□□ -1.63
TRAPPC11-208ENST00000511955 A0A0J9YYE9 177 aa4.84□□□□□ -1.64
TRAPPC11-208ENST00000511955 A0A0U1RQS6 177 aa4.84□□□□□ -1.64
TRAPPC11-208ENST00000511955 A0A1W2PRX2 142 aa4.84□□□□□ -1.64
TRAPPC11-208ENST00000511955 TCRBV21S2A2A0A5A6 115 aa4.84□□□□□ -1.64
TRAPPC11-208ENST00000511955 FAM47E-STBD1D6RA91 191 aa4.84□□□□□ -1.64
TRAPPC11-208ENST00000511955 TRBC1P01850 177 aa4.84□□□□□ -1.64
TRAPPC11-208ENST00000511955 KRT6AP02538 564 aa4.84□□□□□ -1.64
TRAPPC11-208ENST00000511955 AMHP03971 560 aa4.84□□□□□ -1.64
TRAPPC11-208ENST00000511955 AMY2AP04746 511 aa4.84□□□□□ -1.64
TRAPPC11-208ENST00000511955 FCER2P06734 321 aa4.84□□□□□ -1.64
TRAPPC11-208ENST00000511955 OR4E1P0C645 316 aa4.84□□□□□ -1.64
TRAPPC11-208ENST00000511955 EBLN1P0CF75 366 aa4.84□□□□□ -1.64
TRAPPC11-208ENST00000511955 MCF2P10911 925 aa4.84□□□□□ -1.64
TRAPPC11-208ENST00000511955 SLC2A3P11169 496 aa4.84□□□□□ -1.64
TRAPPC11-208ENST00000511955 CTPS1P17812 591 aa4.84□□□□□ -1.64
TRAPPC11-208ENST00000511955 AMY2BP19961 511 aa4.84□□□□□ -1.64
TRAPPC11-208ENST00000511955 CCNOP22674 350 aa4.84□□□□□ -1.64
TRAPPC11-208ENST00000511955 GJA4P35212 333 aa4.84□□□□□ -1.64
TRAPPC11-208ENST00000511955 DAOAP59103 153 aa4.84□□□□□ -1.64
TRAPPC11-208ENST00000511955 VSNL1P62760 191 aa4.84□□□□□ -1.64
TRAPPC11-208ENST00000511955 HPCAP84074 193 aa4.84□□□□□ -1.64
TRAPPC11-208ENST00000511955 POU4F1Q01851 419 aa4.84□□□□□ -1.64
TRAPPC11-208ENST00000511955 DMWDQ09019 674 aa4.84□□□□□ -1.64
TRAPPC11-208ENST00000511955 LSAMPQ13449 338 aa4.84□□□□□ -1.64
TRAPPC11-208ENST00000511955 PDK3Q15120 406 aa4.84□□□□□ -1.64
TRAPPC11-208ENST00000511955 SLC18A3Q16572 532 aa4.84□□□□□ -1.64
TRAPPC11-208ENST00000511955 IQCCQ4KMZ1 466 aa4.84□□□□□ -1.64
TRAPPC11-208ENST00000511955 TMEM41BQ5BJD5 291 aa4.84□□□□□ -1.64
TRAPPC11-208ENST00000511955 ZNF766Q5HY98 468 aa4.84□□□□□ -1.64
TRAPPC11-208ENST00000511955 PRAMEF5Q5TYX0 476 aa4.84□□□□□ -1.64
TRAPPC11-208ENST00000511955 GPR157Q5UAW9 335 aa4.84□□□□□ -1.64
TRAPPC11-208ENST00000511955 DCAF12L1Q5VU92 463 aa4.84□□□□□ -1.64
TRAPPC11-208ENST00000511955 PRAMEF9Q5VWM5 478 aa4.84□□□□□ -1.64
TRAPPC11-208ENST00000511955 PRAMEF6Q5VXH4 476 aa4.84□□□□□ -1.64
TRAPPC11-208ENST00000511955 KCTD16Q68DU8 428 aa4.84□□□□□ -1.64
TRAPPC11-208ENST00000511955 KRT39Q6A163 491 aa4.84□□□□□ -1.64
TRAPPC11-208ENST00000511955 KIAA1841Q6NSI8 718 aa4.84□□□□□ -1.64
TRAPPC11-208ENST00000511955 C3orf33Q6P1S2 294 aa4.84□□□□□ -1.64
TRAPPC11-208ENST00000511955 UNQ6494/PRO21346Q6UXR6 183 aa4.84□□□□□ -1.64
TRAPPC11-208ENST00000511955 RIPOR1Q6ZS17 1223 aa4.84□□□□□ -1.64
TRAPPC11-208ENST00000511955 ESPNLQ6ZVH7 1005 aa4.84□□□□□ -1.64
TRAPPC11-208ENST00000511955 GPRIN1Q7Z2K8 1008 aa4.84□□□□□ -1.64
TRAPPC11-208ENST00000511955 TRIM69Q86WT6 500 aa4.84□□□□□ -1.64
TRAPPC11-208ENST00000511955 ZSWIM9Q86XI8 627 aa4.84□□□□□ -1.64
TRAPPC11-208ENST00000511955 LYSMD2Q8IV50 215 aa4.84□□□□□ -1.64
TRAPPC11-208ENST00000511955 FAM219AQ8IW50 185 aa4.84□□□□□ -1.64
TRAPPC11-208ENST00000511955 SMYD4Q8IYR2 804 aaPredicted RBP4.84□□□□□ -1.64
TRAPPC11-208ENST00000511955 ABI1Q8IZP0 508 aa4.84□□□□□ -1.64
TRAPPC11-208ENST00000511955 FADS6Q8N9I5 356 aa4.84□□□□□ -1.64
TRAPPC11-208ENST00000511955 RHBDD1Q8TEB9 315 aa4.84□□□□□ -1.64
TRAPPC11-208ENST00000511955 AGAP11Q8TF27 550 aa4.84□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms