RNA–Protein interactions for RNA: ENST00000511895.1

LINC01088-208, Transcript of long intergenic non-protein coding RNA 1088, human

TSL 2 BASIC

Gene LINC01088, Length 795 nt, Biotype antisense RNA.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LINC01088-208	ENST00000511895	LCN1P1	Q5VSP4	162 aa		4.95	□□□□□ -1.62
LINC01088-208	ENST00000511895	SLC30A6	Q6NXT4	461 aa		4.95	□□□□□ -1.62
LINC01088-208	ENST00000511895	ZNF497	Q6ZNH5	498 aa		4.95	□□□□□ -1.62
LINC01088-208	ENST00000511895	LACC1	Q8IV20	430 aa		4.95	□□□□□ -1.62
LINC01088-208	ENST00000511895	CCDC89	Q8N998	374 aa		4.95	□□□□□ -1.62
LINC01088-208	ENST00000511895	GPRC5A	Q8NFJ5	357 aa		4.95	□□□□□ -1.62
LINC01088-208	ENST00000511895	HDAC11	Q96DB2	347 aa		4.95	□□□□□ -1.62
LINC01088-208	ENST00000511895	SYT15	Q9BQS2	421 aa		4.95	□□□□□ -1.62
LINC01088-208	ENST00000511895	FUCA2	Q9BTY2	467 aa		4.95	□□□□□ -1.62
LINC01088-208	ENST00000511895	GFRA4	Q9GZZ7	299 aa		4.95	□□□□□ -1.62
LINC01088-208	ENST00000511895	FAM49A	Q9H0Q0	323 aa	Predicted RBP	4.95	□□□□□ -1.62
LINC01088-208	ENST00000511895	ATP13A3	Q9H7F0	1226 aa		4.95	□□□□□ -1.62
LINC01088-208	ENST00000511895	TRPV4	Q9HBA0	871 aa		4.95	□□□□□ -1.62
LINC01088-208	ENST00000511895	BARHL2	Q9NY43	387 aa		4.95	□□□□□ -1.62
LINC01088-208	ENST00000511895	EXOG	Q9Y2C4	368 aa	Known RBP	4.95	□□□□□ -1.62
LINC01088-208	ENST00000511895	DOPEY1	Q5JWR5	2465 aa		4.95	□□□□□ -1.62
LINC01088-208	ENST00000511895	PLXNA3	P51805	1871 aa		4.94	□□□□□ -1.62
LINC01088-208	ENST00000511895	EP300	Q09472	2414 aa	Predicted RBP	4.94	□□□□□ -1.62
LINC01088-208	ENST00000511895	SMG1	Q96Q15	3661 aa	Known RBP	4.94	□□□□□ -1.62
LINC01088-208	ENST00000511895	CYSRT1	A8MQ03	144 aa		4.94	□□□□□ -1.62
LINC01088-208	ENST00000511895	SLCO2B1	O94956	709 aa		4.94	□□□□□ -1.62
LINC01088-208	ENST00000511895	GGPS1	O95749	300 aa		4.94	□□□□□ -1.62
LINC01088-208	ENST00000511895	ALDH1B1	P30837	517 aa		4.94	□□□□□ -1.62
LINC01088-208	ENST00000511895	PTGER4	P35408	488 aa		4.94	□□□□□ -1.62
LINC01088-208	ENST00000511895	LHX1	P48742	406 aa		4.94	□□□□□ -1.62
LINC01088-208	ENST00000511895	RAB28	P51157	221 aa		4.94	□□□□□ -1.62
LINC01088-208	ENST00000511895	KLC1	Q07866	573 aa		4.94	□□□□□ -1.62
LINC01088-208	ENST00000511895	TCTE1	Q5JU00	501 aa		4.94	□□□□□ -1.62
LINC01088-208	ENST00000511895	KRT80	Q6KB66	452 aa		4.94	□□□□□ -1.62
LINC01088-208	ENST00000511895	FBXL22	Q6P050	247 aa		4.94	□□□□□ -1.62
LINC01088-208	ENST00000511895	TMEM207	Q6UWW9	146 aa		4.94	□□□□□ -1.62
LINC01088-208	ENST00000511895	HOGA1	Q86XE5	327 aa		4.94	□□□□□ -1.62
LINC01088-208	ENST00000511895	OR6J1	Q8NGC5	347 aa		4.94	□□□□□ -1.62
LINC01088-208	ENST00000511895	OR4K1	Q8NGD4	311 aa		4.94	□□□□□ -1.62
LINC01088-208	ENST00000511895	OR5AP2	Q8NGF4	316 aa		4.94	□□□□□ -1.62
LINC01088-208	ENST00000511895	VANGL1	Q8TAA9	524 aa	Predicted RBP	4.94	□□□□□ -1.62
LINC01088-208	ENST00000511895	RAET1E	Q8TD07	263 aa		4.94	□□□□□ -1.62
LINC01088-208	ENST00000511895	ARSG	Q96EG1	525 aa		4.94	□□□□□ -1.62
LINC01088-208	ENST00000511895	OTUB1	Q96FW1	271 aa	Predicted RBP	4.94	□□□□□ -1.62
LINC01088-208	ENST00000511895	LINC00479	Q96M42	142 aa		4.94	□□□□□ -1.62
LINC01088-208	ENST00000511895	CPNE1	Q99829	537 aa		4.94	□□□□□ -1.62
LINC01088-208	ENST00000511895	CLEC7A	Q9BXN2	247 aa		4.94	□□□□□ -1.62
LINC01088-208	ENST00000511895	TXLNGY	Q9BZA5	131 aa		4.94	□□□□□ -1.62
LINC01088-208	ENST00000511895	SHARPIN	Q9H0F6	387 aa		4.94	□□□□□ -1.62
LINC01088-208	ENST00000511895	ERVMER34-1	Q9H9K5	563 aa		4.94	□□□□□ -1.62
LINC01088-208	ENST00000511895	CHST11	Q9NPF2	352 aa		4.94	□□□□□ -1.62
LINC01088-208	ENST00000511895	ZDHHC18	Q9NUE0	388 aa		4.94	□□□□□ -1.62
LINC01088-208	ENST00000511895	TBC1D7	Q9P0N9	293 aa		4.94	□□□□□ -1.62
LINC01088-208	ENST00000511895	WDR35	Q9P2L0	1181 aa		4.94	□□□□□ -1.62
LINC01088-208	ENST00000511895	C19orf25	Q9UFG5	118 aa	Predicted RBP	4.94	□□□□□ -1.62
LINC01088-208	ENST00000511895	DNTT	P04053	509 aa		4.93	□□□□□ -1.62
LINC01088-208	ENST00000511895	ATP5B	P06576	529 aa	Known RBP	4.93	□□□□□ -1.62
LINC01088-208	ENST00000511895	TYMP	P19971	482 aa		4.93	□□□□□ -1.62
LINC01088-208	ENST00000511895	CD22	P20273	847 aa		4.93	□□□□□ -1.62
LINC01088-208	ENST00000511895	RBPJ	Q06330	500 aa		4.93	□□□□□ -1.62
LINC01088-208	ENST00000511895	SHH	Q15465	462 aa		4.93	□□□□□ -1.62
LINC01088-208	ENST00000511895	DDX60L	Q5H9U9	1706 aa	Known RBP	4.93	□□□□□ -1.62
LINC01088-208	ENST00000511895	G2E3	Q7L622	706 aa		4.93	□□□□□ -1.62
LINC01088-208	ENST00000511895	PTAR1	Q7Z6K3	402 aa	Predicted RBP	4.93	□□□□□ -1.62
LINC01088-208	ENST00000511895	MFN1	Q8IWA4	741 aa		4.93	□□□□□ -1.62
LINC01088-208	ENST00000511895	LSMEM1	Q8N8F7	131 aa		4.93	□□□□□ -1.62
LINC01088-208	ENST00000511895	ZNF599	Q96NL3	588 aa		4.93	□□□□□ -1.62
LINC01088-208	ENST00000511895	DEFB118	Q96PH6	123 aa		4.93	□□□□□ -1.62
LINC01088-208	ENST00000511895	FEV	Q99581	238 aa		4.93	□□□□□ -1.62
LINC01088-208	ENST00000511895	CDH20	Q9HBT6	801 aa		4.93	□□□□□ -1.62
LINC01088-208	ENST00000511895	WDR83OS	Q9Y284	106 aa		4.93	□□□□□ -1.62
LINC01088-208	ENST00000511895	CHD9	Q3L8U1	2897 aa		4.92	□□□□□ -1.62
LINC01088-208	ENST00000511895	ABCA12	Q86UK0	2595 aa		4.92	□□□□□ -1.62
LINC01088-208	ENST00000511895	URAD	A6NGE7	173 aa		4.92	□□□□□ -1.62
LINC01088-208	ENST00000511895	MSGN1	A6NI15	193 aa		4.92	□□□□□ -1.62
LINC01088-208	ENST00000511895	CLDN4	O14493	209 aa		4.92	□□□□□ -1.62
LINC01088-208	ENST00000511895	PTGES	O14684	152 aa		4.92	□□□□□ -1.62
LINC01088-208	ENST00000511895	EXTL3	O43909	919 aa		4.92	□□□□□ -1.62
LINC01088-208	ENST00000511895	GLRA3	O75311	464 aa		4.92	□□□□□ -1.62
LINC01088-208	ENST00000511895	KHDRBS3	O75525	346 aa	Known RBP	4.92	□□□□□ -1.62
LINC01088-208	ENST00000511895	OR52Z1	P0C646	297 aa		4.92	□□□□□ -1.62
LINC01088-208	ENST00000511895	SAG	P10523	405 aa	Predicted RBP	4.92	□□□□□ -1.62
LINC01088-208	ENST00000511895	CYP11B2	P19099	503 aa		4.92	□□□□□ -1.62
LINC01088-208	ENST00000511895	LUM	P51884	338 aa	Predicted RBP	4.92	□□□□□ -1.62
LINC01088-208	ENST00000511895	KRTAP10-7	P60409	375 aa	Predicted RBP	4.92	□□□□□ -1.62
LINC01088-208	ENST00000511895	POLR2L	P62875	67 aa	Known RBP	4.92	□□□□□ -1.62
LINC01088-208	ENST00000511895	ACSM1	Q08AH1	577 aa		4.92	□□□□□ -1.62
LINC01088-208	ENST00000511895	ITGA7	Q13683	1181 aa		4.92	□□□□□ -1.62
LINC01088-208	ENST00000511895	E2F5	Q15329	346 aa		4.92	□□□□□ -1.62
LINC01088-208	ENST00000511895	PDLIM3	Q53GG5	364 aa	Predicted RBP	4.92	□□□□□ -1.62
LINC01088-208	ENST00000511895	CST9LP1	Q5W188	147 aa		4.92	□□□□□ -1.62
LINC01088-208	ENST00000511895	NDUFAF2	Q8N183	169 aa		4.92	□□□□□ -1.62
LINC01088-208	ENST00000511895	RYBP	Q8N488	228 aa	Predicted RBP	4.92	□□□□□ -1.62
LINC01088-208	ENST00000511895	TDRD5	Q8NAT2	981 aa	Known RBP	4.92	□□□□□ -1.62
LINC01088-208	ENST00000511895	XXYLT1	Q8NBI6	393 aa		4.92	□□□□□ -1.62
LINC01088-208	ENST00000511895	ZNF485	Q8NCK3	441 aa		4.92	□□□□□ -1.62
LINC01088-208	ENST00000511895	ROBO4	Q8WZ75	1007 aa		4.92	□□□□□ -1.62
LINC01088-208	ENST00000511895	FAM71F1	Q96KD3	344 aa	Predicted RBP	4.92	□□□□□ -1.62
LINC01088-208	ENST00000511895	POM121L2	Q96KW2	1035 aa		4.92	□□□□□ -1.62
LINC01088-208	ENST00000511895	ZNF558	Q96NG5	402 aa		4.92	□□□□□ -1.62
LINC01088-208	ENST00000511895	CCDC3	Q9BQI4	270 aa		4.92	□□□□□ -1.62
LINC01088-208	ENST00000511895	DGCR6L	Q9BY27	220 aa		4.92	□□□□□ -1.62
LINC01088-208	ENST00000511895	ZMYND12	Q9H0C1	365 aa		4.92	□□□□□ -1.62
LINC01088-208	ENST00000511895	RABEP2	Q9H5N1	569 aa		4.92	□□□□□ -1.62
LINC01088-208	ENST00000511895	C11orf49	Q9H6J7	331 aa		4.92	□□□□□ -1.62

Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms