RNA–Protein interactions for RNA: ENST00000511009.1

MBD4-209, Transcript of methyl-CpG binding domain 4, DNA glycosylase, human

TSL 2

Gene MBD4, Length 530 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MBD4-209	ENST00000511009	SEPT8	Q92599	483 aa		4.23	□□□□□ -1.73
MBD4-209	ENST00000511009	NSMCE2	Q96MF7	247 aa		4.23	□□□□□ -1.73
MBD4-209	ENST00000511009	UBAC1	Q9BSL1	405 aa		4.23	□□□□□ -1.73
MBD4-209	ENST00000511009	LRRC2	Q9BYS8	371 aa		4.23	□□□□□ -1.73
MBD4-209	ENST00000511009	SHARPIN	Q9H0F6	387 aa		4.23	□□□□□ -1.73
MBD4-209	ENST00000511009	GPN1	Q9HCN4	374 aa	Predicted RBP	4.23	□□□□□ -1.73
MBD4-209	ENST00000511009	INTS10	Q9NVR2	710 aa	Known RBP	4.23	□□□□□ -1.73
MBD4-209	ENST00000511009	OR6C2	Q9NZP2	312 aa		4.23	□□□□□ -1.73
MBD4-209	ENST00000511009	ACTR3B	Q9P1U1	418 aa		4.23	□□□□□ -1.73
MBD4-209	ENST00000511009	SPAST	Q9UBP0	616 aa		4.23	□□□□□ -1.73
MBD4-209	ENST00000511009	TRIM10	Q9UDY6	481 aa		4.23	□□□□□ -1.73
MBD4-209	ENST00000511009	TRIP12	Q14669	1992 aa	Predicted RBP	4.23	□□□□□ -1.73
MBD4-209	ENST00000511009	DHX29	Q7Z478	1369 aa	Known RBP	4.23	□□□□□ -1.73
MBD4-209	ENST00000511009	CFAP73	A6NFT4	308 aa		4.22	□□□□□ -1.73
MBD4-209	ENST00000511009	SLC28A1	O00337	649 aa		4.22	□□□□□ -1.73
MBD4-209	ENST00000511009	INSIG1	O15503	277 aa		4.22	□□□□□ -1.73
MBD4-209	ENST00000511009	BUB3	O43684	328 aa		4.22	□□□□□ -1.73
MBD4-209	ENST00000511009	EXTL3	O43909	919 aa		4.22	□□□□□ -1.73
MBD4-209	ENST00000511009	KIF5C	O60282	957 aa		4.22	□□□□□ -1.73
MBD4-209	ENST00000511009	CLN5	O75503	358 aa		4.22	□□□□□ -1.73
MBD4-209	ENST00000511009	MT-ATP6	P00846	226 aa		4.22	□□□□□ -1.73
MBD4-209	ENST00000511009	TSHB	P01222	138 aa		4.22	□□□□□ -1.73
MBD4-209	ENST00000511009	CRYAA	P02489	173 aa		4.22	□□□□□ -1.73
MBD4-209	ENST00000511009	EDN1	P05305	212 aa		4.22	□□□□□ -1.73
MBD4-209	ENST00000511009	KRT3	P12035	628 aa		4.22	□□□□□ -1.73
MBD4-209	ENST00000511009	CD59	P13987	128 aa		4.22	□□□□□ -1.73
MBD4-209	ENST00000511009	ETS1	P14921	441 aa		4.22	□□□□□ -1.73
MBD4-209	ENST00000511009	CCNA2	P20248	432 aa		4.22	□□□□□ -1.73
MBD4-209	ENST00000511009	RBMS1	P29558	406 aa	Known RBP	4.22	□□□□□ -1.73
MBD4-209	ENST00000511009	SRD5A2	P31213	254 aa		4.22	□□□□□ -1.73
MBD4-209	ENST00000511009	THBS3	P49746	956 aa		4.22	□□□□□ -1.73
MBD4-209	ENST00000511009	SRP54	P61011	504 aa	Known RBP	4.22	□□□□□ -1.73
MBD4-209	ENST00000511009	CDH18	Q13634	790 aa		4.22	□□□□□ -1.73
MBD4-209	ENST00000511009	KRT31	Q15323	416 aa		4.22	□□□□□ -1.73
MBD4-209	ENST00000511009	ZC2HC1C	Q53FD0	456 aa	Predicted RBP	4.22	□□□□□ -1.73
MBD4-209	ENST00000511009	WDR38	Q5JTN6	314 aa		4.22	□□□□□ -1.73
MBD4-209	ENST00000511009	ZNF324B	Q6AW86	544 aa	Predicted RBP	4.22	□□□□□ -1.73
MBD4-209	ENST00000511009	CD164L2	Q6UWJ8	174 aa		4.22	□□□□□ -1.73
MBD4-209	ENST00000511009	C9orf139	Q6ZV77	190 aa		4.22	□□□□□ -1.73
MBD4-209	ENST00000511009	CPEB2	Q7Z5Q1	589 aa	Known RBP	4.22	□□□□□ -1.73
MBD4-209	ENST00000511009	FBXW8	Q8N3Y1	598 aa		4.22	□□□□□ -1.73
MBD4-209	ENST00000511009	TEX9	Q8N6V9	391 aa		4.22	□□□□□ -1.73
MBD4-209	ENST00000511009	NIPA2	Q8N8Q9	360 aa		4.22	□□□□□ -1.73
MBD4-209	ENST00000511009	RNF149	Q8NC42	400 aa		4.22	□□□□□ -1.73
MBD4-209	ENST00000511009	OR52E1	Q8NGJ3	308 aa		4.22	□□□□□ -1.73
MBD4-209	ENST00000511009	LMO3	Q8TAP4	145 aa		4.22	□□□□□ -1.73
MBD4-209	ENST00000511009	SCARB1	Q8WTV0	552 aa		4.22	□□□□□ -1.73
MBD4-209	ENST00000511009	TM9SF4	Q92544	642 aa		4.22	□□□□□ -1.73
MBD4-209	ENST00000511009	HAS2	Q92819	552 aa		4.22	□□□□□ -1.73
MBD4-209	ENST00000511009	ZBTB9	Q96C00	473 aa		4.22	□□□□□ -1.73
MBD4-209	ENST00000511009	ALG14	Q96F25	216 aa		4.22	□□□□□ -1.73
MBD4-209	ENST00000511009	C16orf45	Q96MC5	204 aa	Predicted RBP	4.22	□□□□□ -1.73
MBD4-209	ENST00000511009	HSD3B7	Q9H2F3	369 aa		4.22	□□□□□ -1.73
MBD4-209	ENST00000511009	MTIF3	Q9H2K0	278 aa	Known RBP	4.22	□□□□□ -1.73
MBD4-209	ENST00000511009	TMEM245	Q9H330	911 aa		4.22	□□□□□ -1.73
MBD4-209	ENST00000511009	C5orf66	Q9H5L9	145 aa		4.22	□□□□□ -1.73
MBD4-209	ENST00000511009	TBC1D13	Q9NVG8	400 aa		4.22	□□□□□ -1.73
MBD4-209	ENST00000511009	KCNN3	Q9UGI6	736 aa		4.22	□□□□□ -1.73
MBD4-209	ENST00000511009	SH3GLB1	Q9Y371	365 aa		4.22	□□□□□ -1.73
MBD4-209	ENST00000511009	KIAA1217	Q5T5P2	1943 aa		4.21	□□□□□ -1.74
MBD4-209	ENST00000511009	IGHV4-61	A0A0C4DH41	118 aa		4.21	□□□□□ -1.74
MBD4-209	ENST00000511009		A8MVM7	634 aa		4.21	□□□□□ -1.74
MBD4-209	ENST00000511009	SNURFL	B1AK76	121 aa		4.21	□□□□□ -1.74
MBD4-209	ENST00000511009	ACOT8	O14734	319 aa		4.21	□□□□□ -1.74
MBD4-209	ENST00000511009	RASGRF2	O14827	1237 aa		4.21	□□□□□ -1.74
MBD4-209	ENST00000511009	CHUK	O15111	745 aa		4.21	□□□□□ -1.74
MBD4-209	ENST00000511009	SSX5	O60225	188 aa		4.21	□□□□□ -1.74
MBD4-209	ENST00000511009	FGF17	O60258	216 aa		4.21	□□□□□ -1.74
MBD4-209	ENST00000511009	CDK2AP2	O75956	126 aa		4.21	□□□□□ -1.74
MBD4-209	ENST00000511009	IGHV4-59	P01825	116 aa		4.21	□□□□□ -1.74
MBD4-209	ENST00000511009	CHRNG	P07510	517 aa		4.21	□□□□□ -1.74
MBD4-209	ENST00000511009	GSTA2	P09210	222 aa		4.21	□□□□□ -1.74
MBD4-209	ENST00000511009	NUDT17	P0C025	328 aa		4.21	□□□□□ -1.74
MBD4-209	ENST00000511009	FRMD6-AS1	P0C7T7	363 aa		4.21	□□□□□ -1.74
MBD4-209	ENST00000511009	GHR	P10912	638 aa		4.21	□□□□□ -1.74
MBD4-209	ENST00000511009	FGF3	P11487	239 aa	Predicted RBP	4.21	□□□□□ -1.74
MBD4-209	ENST00000511009	EZR	P15311	586 aa	Known RBP	4.21	□□□□□ -1.74
MBD4-209	ENST00000511009	MARCKS	P29966	332 aa	Predicted RBP	4.21	□□□□□ -1.74
MBD4-209	ENST00000511009	STIP1	P31948	543 aa	Known RBP	4.21	□□□□□ -1.74
MBD4-209	ENST00000511009	SLC1A3	P43003	542 aa		4.21	□□□□□ -1.74
MBD4-209	ENST00000511009	NSF	P46459	744 aa	Known RBP	4.21	□□□□□ -1.74
MBD4-209	ENST00000511009	HNRNPF	P52597	415 aa	Known RBP	4.21	□□□□□ -1.74
MBD4-209	ENST00000511009	KCNK10	P57789	538 aa		4.21	□□□□□ -1.74
MBD4-209	ENST00000511009	NANOS2	P60321	138 aa	Known RBP	4.21	□□□□□ -1.74
MBD4-209	ENST00000511009	IRX4	P78413	519 aa		4.21	□□□□□ -1.74
MBD4-209	ENST00000511009	KCNJ10	P78508	379 aa		4.21	□□□□□ -1.74
MBD4-209	ENST00000511009	SGCG	Q13326	291 aa		4.21	□□□□□ -1.74
MBD4-209	ENST00000511009	GAMT	Q14353	236 aa		4.21	□□□□□ -1.74
MBD4-209	ENST00000511009	HSP90AA5P	Q58FG0	334 aa		4.21	□□□□□ -1.74
MBD4-209	ENST00000511009	ARHGEF16	Q5VV41	709 aa		4.21	□□□□□ -1.74
MBD4-209	ENST00000511009	NEK5	Q6P3R8	708 aa		4.21	□□□□□ -1.74
MBD4-209	ENST00000511009	DHRS11	Q6UWP2	260 aa		4.21	□□□□□ -1.74
MBD4-209	ENST00000511009	TMEM207	Q6UWW9	146 aa		4.21	□□□□□ -1.74
MBD4-209	ENST00000511009	RBM43	Q6ZSC3	357 aa	Known RBP	4.21	□□□□□ -1.74
MBD4-209	ENST00000511009	FCRLA	Q7L513	359 aa		4.21	□□□□□ -1.74
MBD4-209	ENST00000511009	COX8C	Q7Z4L0	72 aa		4.21	□□□□□ -1.74
MBD4-209	ENST00000511009	TAF8	Q7Z7C8	310 aa		4.21	□□□□□ -1.74
MBD4-209	ENST00000511009	RBM23	Q86U06	439 aa	Known RBP	4.21	□□□□□ -1.74
MBD4-209	ENST00000511009	PIGZ	Q86VD9	579 aa		4.21	□□□□□ -1.74
MBD4-209	ENST00000511009	STH	Q8IWL8	128 aa		4.21	□□□□□ -1.74

Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms