RNA–Protein interactions for RNA: ENST00000510737.1

USP53-206, Transcript of ubiquitin specific peptidase 53, humanhuman

TSL 5

Gene USP53, Length 534 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-206ENST00000510737 SLC45A4Q5BKX6 768 aa6.04□□□□□ -1.44
USP53-206ENST00000510737 FAM122CQ6P4D5 195 aa6.04□□□□□ -1.44
USP53-206ENST00000510737 GUSBP11Q6P575 273 aa6.04□□□□□ -1.44
USP53-206ENST00000510737 SLC39A4Q6P5W5 647 aa6.04□□□□□ -1.44
USP53-206ENST00000510737 NFE4Q86UQ8 179 aa6.04□□□□□ -1.44
USP53-206ENST00000510737 NOXA1Q86UR1 476 aa6.04□□□□□ -1.44
USP53-206ENST00000510737 FAM114A1Q8IWE2 563 aa6.04□□□□□ -1.44
USP53-206ENST00000510737 NUP93Q8N1F7 819 aa6.04□□□□□ -1.44
USP53-206ENST00000510737 CPXM2Q8N436 756 aa6.04□□□□□ -1.44
USP53-206ENST00000510737 FBXO39Q8N4B4 442 aa6.04□□□□□ -1.44
USP53-206ENST00000510737 SLC24A4Q8NFF2 622 aa6.04□□□□□ -1.44
USP53-206ENST00000510737 OR2T34Q8NGX1 318 aa6.04□□□□□ -1.44
USP53-206ENST00000510737 GANCQ8TET4 914 aa6.04□□□□□ -1.44
USP53-206ENST00000510737 KCNK16Q96T55 309 aa6.04□□□□□ -1.44
USP53-206ENST00000510737 LITAFQ99732 161 aa6.04□□□□□ -1.44
USP53-206ENST00000510737 SYT15Q9BQS2 421 aa6.04□□□□□ -1.44
USP53-206ENST00000510737 HAUS8Q9BT25 410 aa6.04□□□□□ -1.44
USP53-206ENST00000510737 RBM4Q9BWF3 364 aaKnown RBP6.04□□□□□ -1.44
USP53-206ENST00000510737 C17orf75Q9HAS0 396 aa6.04□□□□□ -1.44
USP53-206ENST00000510737 GDAP2Q9NXN4 497 aa6.04□□□□□ -1.44
USP53-206ENST00000510737 IL37Q9NZH6 218 aa6.04□□□□□ -1.44
USP53-206ENST00000510737 NCKAP1Q9Y2A7 1128 aa6.04□□□□□ -1.44
USP53-206ENST00000510737 NME7Q9Y5B8 376 aa6.04□□□□□ -1.44
USP53-206ENST00000510737 COL27A1Q8IZC6 1860 aaPredicted RBP6.04□□□□□ -1.44
USP53-206ENST00000510737 SPG11Q96JI7 2443 aa6.04□□□□□ -1.44
USP53-206ENST00000510737 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP6.03□□□□□ -1.44
USP53-206ENST00000510737 C17orf113A0A1B0GUU1 675 aa6.03□□□□□ -1.44
USP53-206ENST00000510737 LRRC72A6NJI9 287 aa6.03□□□□□ -1.44
USP53-206ENST00000510737 B9A039 149 aa6.03□□□□□ -1.44
USP53-206ENST00000510737 ANKRD63C9JTQ0 380 aa6.03□□□□□ -1.44
USP53-206ENST00000510737 NVLO15381 856 aaKnown RBP6.03□□□□□ -1.44
USP53-206ENST00000510737 LATO43561 262 aa6.03□□□□□ -1.44
USP53-206ENST00000510737 NEBLO76041 1014 aa6.03□□□□□ -1.44
USP53-206ENST00000510737 HMGB1P09429 215 aaKnown RBP6.03□□□□□ -1.44
USP53-206ENST00000510737 ITGA2P17301 1181 aa6.03□□□□□ -1.44
USP53-206ENST00000510737 MUTP22033 750 aa6.03□□□□□ -1.44
USP53-206ENST00000510737 TUBP50607 506 aa6.03□□□□□ -1.44
USP53-206ENST00000510737 NR1H2P55055 460 aa6.03□□□□□ -1.44
USP53-206ENST00000510737 KLRB1Q12918 225 aa6.03□□□□□ -1.44
USP53-206ENST00000510737 ZNF177Q13360 481 aaPredicted RBP6.03□□□□□ -1.44
USP53-206ENST00000510737 DRAP1Q14919 205 aaPredicted RBP6.03□□□□□ -1.44
USP53-206ENST00000510737 CDKN3Q16667 212 aa6.03□□□□□ -1.44
USP53-206ENST00000510737 EIF2S3LQ2VIR3 472 aaKnown RBP6.03□□□□□ -1.44
USP53-206ENST00000510737 TMEM30BQ3MIR4 351 aa6.03□□□□□ -1.44
USP53-206ENST00000510737 ARHGAP17Q68EM7 881 aa6.03□□□□□ -1.44
USP53-206ENST00000510737 EFL1Q7Z2Z2 1120 aaKnown RBP6.03□□□□□ -1.44
USP53-206ENST00000510737 TBC1D26Q86UD7 250 aa6.03□□□□□ -1.44
USP53-206ENST00000510737 HEATR4Q86WZ0 1026 aa6.03□□□□□ -1.44
USP53-206ENST00000510737 ZC3H3Q8IXZ2 948 aaKnown RBP6.03□□□□□ -1.44
USP53-206ENST00000510737 C9orf43Q8TAL5 461 aaPredicted RBP6.03□□□□□ -1.44
USP53-206ENST00000510737 FBXO32Q969P5 355 aa6.03□□□□□ -1.44
USP53-206ENST00000510737 RSPH9Q9H1X1 276 aaPredicted RBP6.03□□□□□ -1.44
USP53-206ENST00000510737 DDX19AQ9NUU7 478 aaKnown RBP6.03□□□□□ -1.44
USP53-206ENST00000510737 NLGN3Q9NZ94 848 aa6.03□□□□□ -1.44
USP53-206ENST00000510737 SEPT10Q9P0V9 454 aa6.03□□□□□ -1.44
USP53-206ENST00000510737 CDH9Q9ULB4 789 aa6.03□□□□□ -1.44
USP53-206ENST00000510737 CA5BQ9Y2D0 317 aa6.03□□□□□ -1.44
USP53-206ENST00000510737 TP53BP1Q12888 1972 aaPredicted RBP6.03□□□□□ -1.44
USP53-206ENST00000510737 FAM92AA1XBS5 289 aa6.02□□□□□ -1.45
USP53-206ENST00000510737 CLDN5O00501 218 aa6.02□□□□□ -1.45
USP53-206ENST00000510737 SCAMP1O15126 338 aa6.02□□□□□ -1.45
USP53-206ENST00000510737 TCEA3O75764 348 aa6.02□□□□□ -1.45
USP53-206ENST00000510737 RNASEH2AO75792 299 aaKnown RBP6.02□□□□□ -1.45
USP53-206ENST00000510737 PIGRP01833 764 aa6.02□□□□□ -1.45
USP53-206ENST00000510737 NR1D1P20393 614 aa6.02□□□□□ -1.45
USP53-206ENST00000510737 CCT6AP40227 531 aaKnown RBP6.02□□□□□ -1.45
USP53-206ENST00000510737 LIG4P49917 911 aa6.02□□□□□ -1.45
USP53-206ENST00000510737 BLKP51451 505 aa6.02□□□□□ -1.45
USP53-206ENST00000510737 RUNX2Q13950 521 aa6.02□□□□□ -1.45
USP53-206ENST00000510737 KRT32Q14532 448 aa6.02□□□□□ -1.45
USP53-206ENST00000510737 E2F5Q15329 346 aa6.02□□□□□ -1.45
USP53-206ENST00000510737 EDRF1Q3B7T1 1238 aa6.02□□□□□ -1.45
USP53-206ENST00000510737 TTC31Q49AM3 519 aaPredicted RBP6.02□□□□□ -1.45
USP53-206ENST00000510737 MDH1BQ5I0G3 518 aa6.02□□□□□ -1.45
USP53-206ENST00000510737 ZNF776Q68DI1 518 aaPredicted RBP6.02□□□□□ -1.45
USP53-206ENST00000510737 LRRC8EQ6NSJ5 796 aa6.02□□□□□ -1.45
USP53-206ENST00000510737 ADIPOR2Q86V24 386 aa6.02□□□□□ -1.45
USP53-206ENST00000510737 IQCHQ86VS3 1027 aa6.02□□□□□ -1.45
USP53-206ENST00000510737 CSGALNACT2Q8N6G5 542 aa6.02□□□□□ -1.45
USP53-206ENST00000510737 ERMNQ8TAM6 284 aa6.02□□□□□ -1.45
USP53-206ENST00000510737 FAM76AQ8TAV0 307 aa6.02□□□□□ -1.45
USP53-206ENST00000510737 DUSP19Q8WTR2 217 aa6.02□□□□□ -1.45
USP53-206ENST00000510737 CNOT9Q92600 299 aaKnown RBP6.02□□□□□ -1.45
USP53-206ENST00000510737 OTULINQ96BN8 352 aa6.02□□□□□ -1.45
USP53-206ENST00000510737 ZNF560Q96MR9 790 aa6.02□□□□□ -1.45
USP53-206ENST00000510737 NACA2Q9H009 215 aa6.02□□□□□ -1.45
USP53-206ENST00000510737 STN1Q9H668 368 aaKnown RBP6.02□□□□□ -1.45
USP53-206ENST00000510737 PREBQ9HCU5 417 aa6.02□□□□□ -1.45
USP53-206ENST00000510737 OSER1Q9NX31 292 aa6.02□□□□□ -1.45
USP53-206ENST00000510737 PLA2G4CQ9UP65 541 aa6.02□□□□□ -1.45
USP53-206ENST00000510737 DAAM1Q9Y4D1 1078 aa6.02□□□□□ -1.45
USP53-206ENST00000510737 ARHGAP10A1A4S6 786 aa6.01□□□□□ -1.45
USP53-206ENST00000510737 MAGEC1O60732 1142 aa6.01□□□□□ -1.45
USP53-206ENST00000510737 RTN3O95197 1032 aaPredicted RBP6.01□□□□□ -1.45
USP53-206ENST00000510737 OR52Z1P0C646 297 aa6.01□□□□□ -1.45
USP53-206ENST00000510737 ALPPL2P10696 532 aa6.01□□□□□ -1.45
USP53-206ENST00000510737 ITIH1P19827 911 aa6.01□□□□□ -1.45
USP53-206ENST00000510737 HLA-FP30511 346 aa6.01□□□□□ -1.45
USP53-206ENST00000510737 MAT2AP31153 395 aaKnown RBP6.01□□□□□ -1.45
USP53-206ENST00000510737 ATP5C1P36542 298 aaKnown RBP6.01□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms