RNA–Protein interactions for RNA: ENST00000508635.5

UBE2D3-226, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 4

Gene UBE2D3, Length 587 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-226ENST00000508635 MMP12P39900 470 aa3.44□□□□□ -1.86
UBE2D3-226ENST00000508635 EIF2S3P41091 472 aaKnown RBP3.44□□□□□ -1.86
UBE2D3-226ENST00000508635 PNLIPRP1P54315 467 aa3.44□□□□□ -1.86
UBE2D3-226ENST00000508635 CDH6P55285 790 aa3.44□□□□□ -1.86
UBE2D3-226ENST00000508635 SLC37A1P57057 533 aa3.44□□□□□ -1.86
UBE2D3-226ENST00000508635 TAS2R50P59544 299 aa3.44□□□□□ -1.86
UBE2D3-226ENST00000508635 SRP54P61011 504 aaKnown RBP3.44□□□□□ -1.86
UBE2D3-226ENST00000508635 POLR2LP62875 67 aaKnown RBP3.44□□□□□ -1.86
UBE2D3-226ENST00000508635 AP2B1P63010 937 aa3.44□□□□□ -1.86
UBE2D3-226ENST00000508635 SSBP2P81877 361 aaPredicted RBP3.44□□□□□ -1.86
UBE2D3-226ENST00000508635 PPARDQ03181 441 aa3.44□□□□□ -1.86
UBE2D3-226ENST00000508635 BCL2L1Q07817 233 aa3.44□□□□□ -1.86
UBE2D3-226ENST00000508635 GALNT2Q10471 571 aa3.44□□□□□ -1.86
UBE2D3-226ENST00000508635 C1orf61Q13536 156 aa3.44□□□□□ -1.86
UBE2D3-226ENST00000508635 DPYSL3Q14195 570 aa3.44□□□□□ -1.86
UBE2D3-226ENST00000508635 RPS6KA2Q15349 733 aa3.44□□□□□ -1.86
UBE2D3-226ENST00000508635 ELOCQ15369 112 aa3.44□□□□□ -1.86
UBE2D3-226ENST00000508635 HADHQ16836 314 aaKnown RBP3.44□□□□□ -1.86
UBE2D3-226ENST00000508635 ISXQ2M1V0 245 aa3.44□□□□□ -1.86
UBE2D3-226ENST00000508635 ALG11Q2TAA5 492 aa3.44□□□□□ -1.86
UBE2D3-226ENST00000508635 COL28A1Q2UY09 1125 aa3.44□□□□□ -1.86
UBE2D3-226ENST00000508635 ANXA2RQ3ZCQ2 193 aa3.44□□□□□ -1.86
UBE2D3-226ENST00000508635 ANKRD20A8PQ5CZ79 823 aa3.44□□□□□ -1.86
UBE2D3-226ENST00000508635 CFAP58Q5T655 872 aa3.44□□□□□ -1.86
UBE2D3-226ENST00000508635 MORN5Q5VZ52 161 aa3.44□□□□□ -1.86
UBE2D3-226ENST00000508635 KCTD16Q68DU8 428 aa3.44□□□□□ -1.86
UBE2D3-226ENST00000508635 PNCKQ6P2M8 343 aa3.44□□□□□ -1.86
UBE2D3-226ENST00000508635 GUSBP11Q6P575 273 aa3.44□□□□□ -1.86
UBE2D3-226ENST00000508635 LVRNQ6Q4G3 990 aa3.44□□□□□ -1.86
UBE2D3-226ENST00000508635 ENPP7Q6UWV6 458 aa3.44□□□□□ -1.86
UBE2D3-226ENST00000508635 RBM44Q6ZP01 1051 aaKnown RBP3.44□□□□□ -1.86
UBE2D3-226ENST00000508635 MAP7D3Q8IWC1 876 aa3.44□□□□□ -1.86
UBE2D3-226ENST00000508635 LAS2Q8IYD9 372 aa3.44□□□□□ -1.86
UBE2D3-226ENST00000508635 KATNAL2Q8IYT4 538 aa3.44□□□□□ -1.86
UBE2D3-226ENST00000508635 RCOR2Q8IZ40 523 aa3.44□□□□□ -1.86
UBE2D3-226ENST00000508635 CACNA2D3Q8IZS8 1091 aa3.44□□□□□ -1.86
UBE2D3-226ENST00000508635 PQLC3Q8N755 202 aa3.44□□□□□ -1.86
UBE2D3-226ENST00000508635 PLD5Q8N7P1 536 aa3.44□□□□□ -1.86
UBE2D3-226ENST00000508635 NANOGP1Q8N7R0 232 aa3.44□□□□□ -1.86
UBE2D3-226ENST00000508635 LRRC57Q8N9N7 239 aa3.44□□□□□ -1.86
UBE2D3-226ENST00000508635 SPC24Q8NBT2 197 aa3.44□□□□□ -1.86
UBE2D3-226ENST00000508635 KCTD6Q8NC69 237 aa3.44□□□□□ -1.86
UBE2D3-226ENST00000508635 SRFBP1Q8NEF9 429 aaKnown RBP3.44□□□□□ -1.86
UBE2D3-226ENST00000508635 KIAA1524Q8TCG1 905 aa3.44□□□□□ -1.86
UBE2D3-226ENST00000508635 MAPK15Q8TD08 544 aa3.44□□□□□ -1.86
UBE2D3-226ENST00000508635 DENND1AQ8TEH3 1009 aa3.44□□□□□ -1.86
UBE2D3-226ENST00000508635 PIH1D2Q8WWB5 315 aa3.44□□□□□ -1.86
UBE2D3-226ENST00000508635 RPL36ALQ969Q0 106 aaKnown RBP3.44□□□□□ -1.86
UBE2D3-226ENST00000508635 C3orf49Q96BT1 292 aa3.44□□□□□ -1.86
UBE2D3-226ENST00000508635 ZNF845Q96IR2 970 aaPredicted RBP3.44□□□□□ -1.86
UBE2D3-226ENST00000508635 RNF157Q96PX1 679 aa3.44□□□□□ -1.86
UBE2D3-226ENST00000508635 SIGLEC11Q96RL6 698 aa3.44□□□□□ -1.86
UBE2D3-226ENST00000508635 NUDCD1Q96RS6 583 aa3.44□□□□□ -1.86
UBE2D3-226ENST00000508635 IL12RB2Q99665 862 aa3.44□□□□□ -1.86
UBE2D3-226ENST00000508635 MGME1Q9BQP7 344 aa3.44□□□□□ -1.86
UBE2D3-226ENST00000508635 APOOQ9BUR5 198 aa3.44□□□□□ -1.86
UBE2D3-226ENST00000508635 LRRC61Q9BV99 259 aa3.44□□□□□ -1.86
UBE2D3-226ENST00000508635 SORBS1Q9BX66 1292 aaKnown RBP3.44□□□□□ -1.86
UBE2D3-226ENST00000508635 CLPBQ9H078 707 aa3.44□□□□□ -1.86
UBE2D3-226ENST00000508635 ABCG4Q9H172 646 aa3.44□□□□□ -1.86
UBE2D3-226ENST00000508635 ATP13A3Q9H7F0 1226 aa3.44□□□□□ -1.86
UBE2D3-226ENST00000508635 NOD2Q9HC29 1040 aa3.44□□□□□ -1.86
UBE2D3-226ENST00000508635 KCNK9Q9NPC2 374 aa3.44□□□□□ -1.86
UBE2D3-226ENST00000508635 STAU2Q9NUL3 570 aaKnown RBP eCLIP3.44□□□□□ -1.86
UBE2D3-226ENST00000508635 ETNK2Q9NVF9 386 aa3.44□□□□□ -1.86
UBE2D3-226ENST00000508635 TRNAU1APQ9NX07 287 aaKnown RBP3.44□□□□□ -1.86
UBE2D3-226ENST00000508635 NCKIPSDQ9NZQ3 722 aa3.44□□□□□ -1.86
UBE2D3-226ENST00000508635 APOBEC3BQ9UH17 382 aaKnown RBP3.44□□□□□ -1.86
UBE2D3-226ENST00000508635 TFR2Q9UP52 801 aa3.44□□□□□ -1.86
UBE2D3-226ENST00000508635 OR1A2Q9Y585 309 aa3.44□□□□□ -1.86
UBE2D3-226ENST00000508635 DGKBQ9Y6T7 804 aa3.44□□□□□ -1.86
UBE2D3-226ENST00000508635 CFAP47Q6ZTR5 3102 aa3.44□□□□□ -1.86
UBE2D3-226ENST00000508635 AKAP13Q12802 2813 aa3.43□□□□□ -1.86
UBE2D3-226ENST00000508635 TP53BP1Q12888 1972 aaPredicted RBP3.43□□□□□ -1.86
UBE2D3-226ENST00000508635 A0A0U1RQJ8 604 aa3.43□□□□□ -1.86
UBE2D3-226ENST00000508635 A0A1W2PNU3 283 aaPredicted RBP3.43□□□□□ -1.86
UBE2D3-226ENST00000508635 TMEM202A6NGA9 273 aa3.43□□□□□ -1.86
UBE2D3-226ENST00000508635 NPIPB15A6NHN6 443 aaPredicted RBP3.43□□□□□ -1.86
UBE2D3-226ENST00000508635 AGAP5A6NIR3 686 aa3.43□□□□□ -1.86
UBE2D3-226ENST00000508635 CACNB4O00305 520 aaPredicted RBP3.43□□□□□ -1.86
UBE2D3-226ENST00000508635 NTN3O00634 580 aaPredicted RBP3.43□□□□□ -1.86
UBE2D3-226ENST00000508635 RRP8O43159 456 aaKnown RBP3.43□□□□□ -1.86
UBE2D3-226ENST00000508635 PSTPIP1O43586 416 aa3.43□□□□□ -1.86
UBE2D3-226ENST00000508635 MFSD11O43934 449 aa3.43□□□□□ -1.86
UBE2D3-226ENST00000508635 SOCS5O75159 536 aa3.43□□□□□ -1.86
UBE2D3-226ENST00000508635 USP12O75317 370 aa3.43□□□□□ -1.86
UBE2D3-226ENST00000508635 CSO75390 466 aaKnown RBP3.43□□□□□ -1.86
UBE2D3-226ENST00000508635 TCEA3O75764 348 aa3.43□□□□□ -1.86
UBE2D3-226ENST00000508635 HEXIM1O94992 359 aaKnown RBP3.43□□□□□ -1.86
UBE2D3-226ENST00000508635 PGLSO95336 258 aa3.43□□□□□ -1.86
UBE2D3-226ENST00000508635 TNFP01375 233 aa3.43□□□□□ -1.86
UBE2D3-226ENST00000508635 ALDOAP04075 364 aaKnown RBP3.43□□□□□ -1.86
UBE2D3-226ENST00000508635 PCCBP05166 539 aa3.43□□□□□ -1.86
UBE2D3-226ENST00000508635 ENO1P06733 434 aaKnown RBP3.43□□□□□ -1.86
UBE2D3-226ENST00000508635 CD63P08962 238 aa3.43□□□□□ -1.86
UBE2D3-226ENST00000508635 ALPIP09923 528 aa3.43□□□□□ -1.86
UBE2D3-226ENST00000508635 RFPL3SP0C7P2 107 aa3.43□□□□□ -1.86
UBE2D3-226ENST00000508635 CTSEP14091 401 aa3.43□□□□□ -1.86
UBE2D3-226ENST00000508635 LHCGRP22888 699 aa3.43□□□□□ -1.86
UBE2D3-226ENST00000508635 CCNCP24863 283 aa3.43□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms