RNA–Protein interactions for RNA: ENST00000506880.5

PDGFC-205, Transcript of platelet derived growth factor C, humanhuman

TSL 2

Gene PDGFC, Length 1,014 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-205ENST00000506880 CCDC63Q8NA47 563 aa8.07□□□□□ -1.12
PDGFC-205ENST00000506880 PPFIBP2Q8ND30 876 aa8.07□□□□□ -1.12
PDGFC-205ENST00000506880 OR1L3Q8NH93 324 aa8.07□□□□□ -1.12
PDGFC-205ENST00000506880 OR2W6PQ8NHA6 318 aa8.07□□□□□ -1.12
PDGFC-205ENST00000506880 TCP10LQ8TDR4 215 aa8.07□□□□□ -1.12
PDGFC-205ENST00000506880 KCNE4Q8WWG9 221 aa8.07□□□□□ -1.12
PDGFC-205ENST00000506880 STON2Q8WXE9 905 aa8.07□□□□□ -1.12
PDGFC-205ENST00000506880 ATP6V1E2Q96A05 226 aa8.07□□□□□ -1.12
PDGFC-205ENST00000506880 PYCR2Q96C36 320 aa8.07□□□□□ -1.12
PDGFC-205ENST00000506880 SLC45A3Q96JT2 553 aa8.07□□□□□ -1.12
PDGFC-205ENST00000506880 FAR2Q96K12 515 aa8.07□□□□□ -1.12
PDGFC-205ENST00000506880 ATP6V1G3Q96LB4 118 aa8.07□□□□□ -1.12
PDGFC-205ENST00000506880 GBP5Q96PP8 586 aa8.07□□□□□ -1.12
PDGFC-205ENST00000506880 KCNC2Q96PR1 638 aa8.07□□□□□ -1.12
PDGFC-205ENST00000506880 FRG2BQ96QU4 278 aa8.07□□□□□ -1.12
PDGFC-205ENST00000506880 SERPINI1Q99574 410 aa8.07□□□□□ -1.12
PDGFC-205ENST00000506880 TBCDQ9BTW9 1192 aa8.07□□□□□ -1.12
PDGFC-205ENST00000506880 ACAT2Q9BWD1 397 aa8.07□□□□□ -1.12
PDGFC-205ENST00000506880 ANKHQ9HCJ1 492 aa8.07□□□□□ -1.12
PDGFC-205ENST00000506880 FAM60AQ9NP50 221 aa8.07□□□□□ -1.12
PDGFC-205ENST00000506880 MKKSQ9NPJ1 570 aaPredicted RBP8.07□□□□□ -1.12
PDGFC-205ENST00000506880 LHX9Q9NQ69 397 aa8.07□□□□□ -1.12
PDGFC-205ENST00000506880 CUTCQ9NTM9 273 aa8.07□□□□□ -1.12
PDGFC-205ENST00000506880 MRGBPQ9NV56 204 aa8.07□□□□□ -1.12
PDGFC-205ENST00000506880 SIRT5Q9NXA8 310 aa8.07□□□□□ -1.12
PDGFC-205ENST00000506880 HAO1Q9UJM8 370 aa8.07□□□□□ -1.12
PDGFC-205ENST00000506880 EMCNQ9ULC0 261 aa8.07□□□□□ -1.12
PDGFC-205ENST00000506880 MAPRE3Q9UPY8 281 aa8.07□□□□□ -1.12
PDGFC-205ENST00000506880 MAP1BP46821 2468 aaKnown RBP8.07□□□□□ -1.12
PDGFC-205ENST00000506880 A0A1W2PNU3 283 aaPredicted RBP8.06□□□□□ -1.12
PDGFC-205ENST00000506880 A0A1W2PQ72 361 aa8.06□□□□□ -1.12
PDGFC-205ENST00000506880 FAM149AA5PLN7 773 aa8.06□□□□□ -1.12
PDGFC-205ENST00000506880 SMIM23A6NLE4 172 aa8.06□□□□□ -1.12
PDGFC-205ENST00000506880 SLCO1B7G3V0H7 640 aa8.06□□□□□ -1.12
PDGFC-205ENST00000506880 HAT1O14929 419 aa8.06□□□□□ -1.12
PDGFC-205ENST00000506880 OR1F1O43749 312 aa8.06□□□□□ -1.12
PDGFC-205ENST00000506880 RAD1O60671 282 aa8.06□□□□□ -1.12
PDGFC-205ENST00000506880 SUPT7LO94864 414 aa8.06□□□□□ -1.12
PDGFC-205ENST00000506880 SERPINE1P05121 402 aa8.06□□□□□ -1.12
PDGFC-205ENST00000506880 BPGMP07738 259 aa8.06□□□□□ -1.12
PDGFC-205ENST00000506880 SMIM10L1P0DMW3 83 aa8.06□□□□□ -1.12
PDGFC-205ENST00000506880 UROSP10746 265 aa8.06□□□□□ -1.12
PDGFC-205ENST00000506880 HGFP14210 728 aa8.06□□□□□ -1.12
PDGFC-205ENST00000506880 PVRP15151 417 aa8.06□□□□□ -1.12
PDGFC-205ENST00000506880 ALOX12P18054 663 aa8.06□□□□□ -1.12
PDGFC-205ENST00000506880 JAK1P23458 1154 aa8.06□□□□□ -1.12
PDGFC-205ENST00000506880 PPP2R1BP30154 601 aa8.06□□□□□ -1.12
PDGFC-205ENST00000506880 EIF2S3P41091 472 aaKnown RBP8.06□□□□□ -1.12
PDGFC-205ENST00000506880 ETV5P41161 510 aa8.06□□□□□ -1.12
PDGFC-205ENST00000506880 VSX2P58304 361 aaPredicted RBP8.06□□□□□ -1.12
PDGFC-205ENST00000506880 TRA2BP62995 288 aaKnown RBP8.06□□□□□ -1.12
PDGFC-205ENST00000506880 SH3BP2P78314 561 aa8.06□□□□□ -1.12
PDGFC-205ENST00000506880 TRAF3Q13114 568 aa8.06□□□□□ -1.12
PDGFC-205ENST00000506880 DOC2AQ14183 400 aa8.06□□□□□ -1.12
PDGFC-205ENST00000506880 SLBPQ14493 270 aaKnown RBP eCLIP8.06□□□□□ -1.12
PDGFC-205ENST00000506880 HSP90B2PQ58FF3 399 aa8.06□□□□□ -1.12
PDGFC-205ENST00000506880 ATG16L1Q676U5 607 aa8.06□□□□□ -1.12
PDGFC-205ENST00000506880 TRIM40Q6P9F5 258 aa8.06□□□□□ -1.12
PDGFC-205ENST00000506880 GPRIN3Q6ZVF9 776 aa8.06□□□□□ -1.12
PDGFC-205ENST00000506880 VN1R4Q7Z5H5 301 aa8.06□□□□□ -1.12
PDGFC-205ENST00000506880 TRIM73Q86UV7 250 aa8.06□□□□□ -1.12
PDGFC-205ENST00000506880 TAX1BP1Q86VP1 789 aa8.06□□□□□ -1.12
PDGFC-205ENST00000506880 CACNA2D3Q8IZS8 1091 aa8.06□□□□□ -1.12
PDGFC-205ENST00000506880 FAM9CQ8IZT9 166 aa8.06□□□□□ -1.12
PDGFC-205ENST00000506880 ZCCHC7Q8N3Z6 543 aaKnown RBP8.06□□□□□ -1.12
PDGFC-205ENST00000506880 SPATA6LQ8N4H0 392 aa8.06□□□□□ -1.12
PDGFC-205ENST00000506880 OR2L5Q8NG80 312 aa8.06□□□□□ -1.12
PDGFC-205ENST00000506880 OR7G3Q8NG95 312 aa8.06□□□□□ -1.12
PDGFC-205ENST00000506880 OR6Y1Q8NGX8 325 aa8.06□□□□□ -1.12
PDGFC-205ENST00000506880 TRPC4APQ8TEL6 797 aa8.06□□□□□ -1.12
PDGFC-205ENST00000506880 CREB3L4Q8TEY5 395 aa8.06□□□□□ -1.12
PDGFC-205ENST00000506880 JPH3Q8WXH2 748 aaPredicted RBP8.06□□□□□ -1.12
PDGFC-205ENST00000506880 THAP4Q8WY91 577 aa8.06□□□□□ -1.12
PDGFC-205ENST00000506880 NKD1Q969G9 470 aa8.06□□□□□ -1.12
PDGFC-205ENST00000506880 CLIP3Q96DZ5 547 aa8.06□□□□□ -1.12
PDGFC-205ENST00000506880 PHF21BQ96EK2 531 aa8.06□□□□□ -1.12
PDGFC-205ENST00000506880 SMIM10Q96HG1 83 aa8.06□□□□□ -1.12
PDGFC-205ENST00000506880 CCNL2Q96S94 520 aaPredicted RBP8.06□□□□□ -1.12
PDGFC-205ENST00000506880 LYRM4Q9HD34 91 aa8.06□□□□□ -1.12
PDGFC-205ENST00000506880 CUEDC1Q9NWM3 386 aaPredicted RBP8.06□□□□□ -1.12
PDGFC-205ENST00000506880 TSR3Q9UJK0 312 aaKnown RBP8.06□□□□□ -1.12
PDGFC-205ENST00000506880 MRPS33Q9Y291 106 aaKnown RBP8.06□□□□□ -1.12
PDGFC-205ENST00000506880 SPACA6W5XKT8 324 aa8.06□□□□□ -1.12
PDGFC-205ENST00000506880 NUP210LQ5VU65 1888 aa8.06□□□□□ -1.12
PDGFC-205ENST00000506880 AKAP13Q12802 2813 aa8.06□□□□□ -1.12
PDGFC-205ENST00000506880 DMXL2Q8TDJ6 3036 aa8.05□□□□□ -1.12
PDGFC-205ENST00000506880 EPG5Q9HCE0 2579 aa8.05□□□□□ -1.12
PDGFC-205ENST00000506880 A0A0J9YVX5 310 aa8.05□□□□□ -1.12
PDGFC-205ENST00000506880 LRIT2A6NDA9 550 aa8.05□□□□□ -1.12
PDGFC-205ENST00000506880 ZNF891A8MT65 544 aaPredicted RBP8.05□□□□□ -1.12
PDGFC-205ENST00000506880 GOLGA8RI6L899 631 aa8.05□□□□□ -1.12
PDGFC-205ENST00000506880 AGPSO00116 658 aa8.05□□□□□ -1.12
PDGFC-205ENST00000506880 TERTO14746 1132 aaKnown RBP8.05□□□□□ -1.12
PDGFC-205ENST00000506880 ULK1O75385 1050 aa8.05□□□□□ -1.12
PDGFC-205ENST00000506880 KIAA0754O94854 1291 aa8.05□□□□□ -1.12
PDGFC-205ENST00000506880 EPORP19235 508 aa8.05□□□□□ -1.12
PDGFC-205ENST00000506880 ITIH1P19827 911 aa8.05□□□□□ -1.12
PDGFC-205ENST00000506880 PRPH2P23942 346 aa8.05□□□□□ -1.12
PDGFC-205ENST00000506880 MPSTP25325 297 aa8.05□□□□□ -1.12
PDGFC-205ENST00000506880 VARSP26640 1264 aaKnown RBP8.05□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms