RNA–Protein interactions for RNA: ENST00000506679.5

GYPB-207, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 606 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-207ENST00000506679 E9PQ18 207 aa2.39□□□□□ -2.03
GYPB-207ENST00000506679 IFIT3O14879 490 aaKnown RBP2.39□□□□□ -2.03
GYPB-207ENST00000506679 WDR46O15213 610 aaKnown RBP2.39□□□□□ -2.03
GYPB-207ENST00000506679 PI15O43692 258 aa2.39□□□□□ -2.03
GYPB-207ENST00000506679 EIF5BO60841 1220 aaKnown RBP2.39□□□□□ -2.03
GYPB-207ENST00000506679 TBCAO75347 108 aaKnown RBP2.39□□□□□ -2.03
GYPB-207ENST00000506679 ANKRD34CP0C6C1 535 aa2.39□□□□□ -2.03
GYPB-207ENST00000506679 TSPY3P0CV98 308 aa2.39□□□□□ -2.03
GYPB-207ENST00000506679 TSPY8P0CW00 308 aa2.39□□□□□ -2.03
GYPB-207ENST00000506679 SELEP16581 610 aa2.39□□□□□ -2.03
GYPB-207ENST00000506679 OR3A1P47881 315 aa2.39□□□□□ -2.03
GYPB-207ENST00000506679 ELAVL2Q12926 359 aaKnown RBP2.39□□□□□ -2.03
GYPB-207ENST00000506679 BFSP1Q12934 665 aa2.39□□□□□ -2.03
GYPB-207ENST00000506679 FAM106AQ4KMX7 169 aa2.39□□□□□ -2.03
GYPB-207ENST00000506679 ATP1A1-AS1Q5TC04 95 aa2.39□□□□□ -2.03
GYPB-207ENST00000506679 ZNF772Q68DY9 489 aaPredicted RBP2.39□□□□□ -2.03
GYPB-207ENST00000506679 DHRS11Q6UWP2 260 aa2.39□□□□□ -2.03
GYPB-207ENST00000506679 SPATA21Q7Z572 469 aa2.39□□□□□ -2.03
GYPB-207ENST00000506679 C5orf24Q7Z6I8 188 aa2.39□□□□□ -2.03
GYPB-207ENST00000506679 PIGWQ7Z7B1 504 aa2.39□□□□□ -2.03
GYPB-207ENST00000506679 ZER1Q7Z7L7 766 aa2.39□□□□□ -2.03
GYPB-207ENST00000506679 ZFAND4Q86XD8 727 aa2.39□□□□□ -2.03
GYPB-207ENST00000506679 CREBRFQ8IUR6 639 aa2.39□□□□□ -2.03
GYPB-207ENST00000506679 AMER3Q8N944 861 aa2.39□□□□□ -2.03
GYPB-207ENST00000506679 OR10G7Q8NGN6 311 aa2.39□□□□□ -2.03
GYPB-207ENST00000506679 LRRC15Q8TF66 581 aa2.39□□□□□ -2.03
GYPB-207ENST00000506679 GRK7Q8WTQ7 553 aa2.39□□□□□ -2.03
GYPB-207ENST00000506679 NXPE2Q96DL1 559 aa2.39□□□□□ -2.03
GYPB-207ENST00000506679 OMA1Q96E52 524 aa2.39□□□□□ -2.03
GYPB-207ENST00000506679 AGAP4Q96P64 663 aa2.39□□□□□ -2.03
GYPB-207ENST00000506679 TSSK2Q96PF2 358 aa2.39□□□□□ -2.03
GYPB-207ENST00000506679 GBP5Q96PP8 586 aa2.39□□□□□ -2.03
GYPB-207ENST00000506679 NEDD4LQ96PU5 975 aa2.39□□□□□ -2.03
GYPB-207ENST00000506679 ALKBH7Q9BT30 221 aaPredicted RBP2.39□□□□□ -2.03
GYPB-207ENST00000506679 MLPHQ9BV36 600 aaPredicted RBP2.39□□□□□ -2.03
GYPB-207ENST00000506679 LRRC61Q9BV99 259 aa2.39□□□□□ -2.03
GYPB-207ENST00000506679 C5orf66Q9H5L9 145 aa2.39□□□□□ -2.03
GYPB-207ENST00000506679 FNDC4Q9H6D8 234 aaPredicted RBP2.39□□□□□ -2.03
GYPB-207ENST00000506679 C10orf88Q9H8K7 445 aa2.39□□□□□ -2.03
GYPB-207ENST00000506679 NUDT4Q9NZJ9 180 aa2.39□□□□□ -2.03
GYPB-207ENST00000506679 THAP10Q9P2Z0 257 aaPredicted RBP2.39□□□□□ -2.03
GYPB-207ENST00000506679 LNPEPQ9UIQ6 1025 aa2.39□□□□□ -2.03
GYPB-207ENST00000506679 NOCTQ9UK39 431 aaKnown RBP2.39□□□□□ -2.03
GYPB-207ENST00000506679 KLK13Q9UKR3 277 aa2.39□□□□□ -2.03
GYPB-207ENST00000506679 COL5A2P05997 1499 aaPredicted RBP2.39□□□□□ -2.03
GYPB-207ENST00000506679 IGHV3-38A0A0C4DH36 116 aa2.38□□□□□ -2.03
GYPB-207ENST00000506679 A8MVM7 634 aa2.38□□□□□ -2.03
GYPB-207ENST00000506679 KIF5CO60282 957 aa2.38□□□□□ -2.03
GYPB-207ENST00000506679 SNAP91O60641 907 aa2.38□□□□□ -2.03
GYPB-207ENST00000506679 RPN1P04843 607 aaKnown RBP2.38□□□□□ -2.03
GYPB-207ENST00000506679 DLATP10515 647 aaKnown RBP2.38□□□□□ -2.03
GYPB-207ENST00000506679 GLULP15104 373 aa2.38□□□□□ -2.03
GYPB-207ENST00000506679 PDHA2P29803 388 aa2.38□□□□□ -2.03
GYPB-207ENST00000506679 OR3A3P47888 321 aa2.38□□□□□ -2.03
GYPB-207ENST00000506679 LMO4P61968 165 aa2.38□□□□□ -2.03
GYPB-207ENST00000506679 TSPY1Q01534 308 aa2.38□□□□□ -2.03
GYPB-207ENST00000506679 SCN1BQ07699 218 aa2.38□□□□□ -2.03
GYPB-207ENST00000506679 SCARB2Q14108 478 aa2.38□□□□□ -2.03
GYPB-207ENST00000506679 GRB14Q14449 540 aa2.38□□□□□ -2.03
GYPB-207ENST00000506679 FGD3Q5JSP0 725 aa2.38□□□□□ -2.03
GYPB-207ENST00000506679 SPANXN4Q5MJ08 99 aa2.38□□□□□ -2.03
GYPB-207ENST00000506679 FAM46CQ5VWP2 391 aa2.38□□□□□ -2.03
GYPB-207ENST00000506679 ZNF343Q6P1L6 599 aa2.38□□□□□ -2.03
GYPB-207ENST00000506679 PAQR6Q6TCH4 344 aa2.38□□□□□ -2.03
GYPB-207ENST00000506679 PET117Q6UWS5 81 aa2.38□□□□□ -2.03
GYPB-207ENST00000506679 NHLRC1Q6VVB1 395 aa2.38□□□□□ -2.03
GYPB-207ENST00000506679 KRT77Q7Z794 578 aa2.38□□□□□ -2.03
GYPB-207ENST00000506679 PHLDB2Q86SQ0 1253 aa2.38□□□□□ -2.03
GYPB-207ENST00000506679 MEX3DQ86XN8 651 aaKnown RBP2.38□□□□□ -2.03
GYPB-207ENST00000506679 ZC3H3Q8IXZ2 948 aaKnown RBP2.38□□□□□ -2.03
GYPB-207ENST00000506679 Q8N377 158 aa2.38□□□□□ -2.03
GYPB-207ENST00000506679 TEX26Q8N6G2 289 aa2.38□□□□□ -2.03
GYPB-207ENST00000506679 TCEANCQ8N8B7 351 aa2.38□□□□□ -2.03
GYPB-207ENST00000506679 CD99L2Q8TCZ2 262 aa2.38□□□□□ -2.03
GYPB-207ENST00000506679 SAP25Q8TEE9 199 aa2.38□□□□□ -2.03
GYPB-207ENST00000506679 C11orf52Q96A22 123 aa2.38□□□□□ -2.03
GYPB-207ENST00000506679 ATXN7L3BQ96GX2 97 aa2.38□□□□□ -2.03
GYPB-207ENST00000506679 LGMNQ99538 433 aa2.38□□□□□ -2.03
GYPB-207ENST00000506679 MINDY3Q9H8M7 445 aa2.38□□□□□ -2.03
GYPB-207ENST00000506679 B3GAT2Q9NPZ5 323 aa2.38□□□□□ -2.03
GYPB-207ENST00000506679 SLCO1C1Q9NYB5 712 aa2.38□□□□□ -2.03
GYPB-207ENST00000506679 SLC12A6Q9UHW9 1150 aa2.38□□□□□ -2.03
GYPB-207ENST00000506679 RUVBL2Q9Y230 463 aaKnown RBP2.38□□□□□ -2.03
GYPB-207ENST00000506679 MMP24Q9Y5R2 645 aa2.38□□□□□ -2.03
GYPB-207ENST00000506679 POMT1Q9Y6A1 747 aa2.38□□□□□ -2.03
GYPB-207ENST00000506679 FER1L5A0AVI2 2057 aa2.38□□□□□ -2.03
GYPB-207ENST00000506679 COL2A1P02458 1487 aaPredicted RBP2.38□□□□□ -2.03
GYPB-207ENST00000506679 IGHV4-30-2A0A087WSY4 118 aa2.37□□□□□ -2.03
GYPB-207ENST00000506679 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP2.37□□□□□ -2.03
GYPB-207ENST00000506679 hCG_38984A0A1B0GV85 526 aa2.37□□□□□ -2.03
GYPB-207ENST00000506679 ILVBLA1L0T0 632 aa2.37□□□□□ -2.03
GYPB-207ENST00000506679 SERINC4A6NH21 518 aa2.37□□□□□ -2.03
GYPB-207ENST00000506679 YDJCA8MPS7 323 aa2.37□□□□□ -2.03
GYPB-207ENST00000506679 RTCAO00442 366 aaKnown RBP2.37□□□□□ -2.03
GYPB-207ENST00000506679 TRAFD1O14545 582 aaPredicted RBP2.37□□□□□ -2.03
GYPB-207ENST00000506679 TFECO14948 347 aaPredicted RBP2.37□□□□□ -2.03
GYPB-207ENST00000506679 MAGEB2O15479 319 aa2.37□□□□□ -2.03
GYPB-207ENST00000506679 MT-ND2P03891 347 aa2.37□□□□□ -2.03
GYPB-207ENST00000506679 C4BPBP20851 252 aa2.37□□□□□ -2.03
GYPB-207ENST00000506679 SP100P23497 879 aaPredicted RBP2.37□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms