RNA–Protein interactions for RNA: ENST00000506537.1

PDLIM7-216, Transcript of PDZ and LIM domain 7, humanhuman

TSL 2

Gene PDLIM7, Length 636 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-216ENST00000506537 VN1R5Q7Z5H4 357 aa17.31■□□□□ 0.36
PDLIM7-216ENST00000506537 AFAP1L2Q8N4X5 818 aa17.31■□□□□ 0.36
PDLIM7-216ENST00000506537 TEX9Q8N6V9 391 aa17.31■□□□□ 0.36
PDLIM7-216ENST00000506537 EXD3Q8N9H8 876 aa17.31■□□□□ 0.36
PDLIM7-216ENST00000506537 ACMSDQ8TDX5 336 aa17.31■□□□□ 0.36
PDLIM7-216ENST00000506537 PHF21BQ96EK2 531 aa17.31■□□□□ 0.36
PDLIM7-216ENST00000506537 PTCD3Q96EY7 689 aaKnown RBP17.31■□□□□ 0.36
PDLIM7-216ENST00000506537 SLC6A16Q9GZN6 736 aa17.31■□□□□ 0.36
PDLIM7-216ENST00000506537 SOX17Q9H6I2 414 aaPredicted RBP17.31■□□□□ 0.36
PDLIM7-216ENST00000506537 PPCSQ9HAB8 311 aa17.31■□□□□ 0.36
PDLIM7-216ENST00000506537 TMEM216Q9P0N5 145 aa17.31■□□□□ 0.36
PDLIM7-216ENST00000506537 ZNF490Q9ULM2 529 aaPredicted RBP17.31■□□□□ 0.36
PDLIM7-216ENST00000506537 CDC14AQ9UNH5 594 aa17.31■□□□□ 0.36
PDLIM7-216ENST00000506537 KCNMB2Q9Y691 235 aa17.31■□□□□ 0.36
PDLIM7-216ENST00000506537 SCN3AQ9NY46 2000 aa17.3■□□□□ 0.36
PDLIM7-216ENST00000506537 H2AFYO75367 372 aaKnown RBP17.3■□□□□ 0.36
PDLIM7-216ENST00000506537 WFS1O76024 890 aa17.3■□□□□ 0.36
PDLIM7-216ENST00000506537 TBX6O95947 436 aaPredicted RBP17.3■□□□□ 0.36
PDLIM7-216ENST00000506537 B3GALT4O96024 378 aa17.3■□□□□ 0.36
PDLIM7-216ENST00000506537 CD63P08962 238 aa17.3■□□□□ 0.36
PDLIM7-216ENST00000506537 FAM87AP0C7U9 286 aa17.3■□□□□ 0.36
PDLIM7-216ENST00000506537 CXCR2P25025 360 aa17.3■□□□□ 0.36
PDLIM7-216ENST00000506537 OTX2P32243 289 aa17.3■□□□□ 0.36
PDLIM7-216ENST00000506537 CASP2P42575 452 aa17.3■□□□□ 0.36
PDLIM7-216ENST00000506537 IRF8Q02556 426 aa17.3■□□□□ 0.36
PDLIM7-216ENST00000506537 PCDH1Q08174 1060 aa17.3■□□□□ 0.36
PDLIM7-216ENST00000506537 LY6DQ14210 128 aa17.3■□□□□ 0.36
PDLIM7-216ENST00000506537 TBCCQ15814 346 aa17.3■□□□□ 0.36
PDLIM7-216ENST00000506537 VWA2Q5GFL6 755 aa17.3■□□□□ 0.36
PDLIM7-216ENST00000506537 CPZQ66K79 652 aa17.3■□□□□ 0.36
PDLIM7-216ENST00000506537 GOLGA7Q7Z5G4 137 aa17.3■□□□□ 0.36
PDLIM7-216ENST00000506537 PPP1R32Q7Z5V6 425 aa17.3■□□□□ 0.36
PDLIM7-216ENST00000506537 MRGPREQ86SM8 312 aa17.3■□□□□ 0.36
PDLIM7-216ENST00000506537 TRPV3Q8NET8 790 aa17.3■□□□□ 0.36
PDLIM7-216ENST00000506537 STT3BQ8TCJ2 826 aa17.3■□□□□ 0.36
PDLIM7-216ENST00000506537 WBP1Q96G27 269 aa17.3■□□□□ 0.36
PDLIM7-216ENST00000506537 EFCAB11Q9BUY7 163 aa17.3■□□□□ 0.36
PDLIM7-216ENST00000506537 SEMA4CQ9C0C4 833 aa17.3■□□□□ 0.36
PDLIM7-216ENST00000506537 PITHD1Q9GZP4 211 aaPredicted RBP17.3■□□□□ 0.36
PDLIM7-216ENST00000506537 KLHL31Q9H511 634 aa17.3■□□□□ 0.36
PDLIM7-216ENST00000506537 NT5DC2Q9H857 520 aa17.3■□□□□ 0.36
PDLIM7-216ENST00000506537 TRPC4Q9UBN4 977 aa17.3■□□□□ 0.36
PDLIM7-216ENST00000506537 ZNF282Q9UDV7 671 aaPredicted RBP17.3■□□□□ 0.36
PDLIM7-216ENST00000506537 NXT1Q9UKK6 140 aaKnown RBP17.3■□□□□ 0.36
PDLIM7-216ENST00000506537 MAN2B2Q9Y2E5 1009 aa17.3■□□□□ 0.36
PDLIM7-216ENST00000506537 MAP4K5Q9Y4K4 846 aa17.3■□□□□ 0.36
PDLIM7-216ENST00000506537 SLC22A7Q9Y694 548 aa17.3■□□□□ 0.36
PDLIM7-216ENST00000506537 CFAP46Q8IYW2 2715 aa17.29■□□□□ 0.36
PDLIM7-216ENST00000506537 ZNF860A6NHJ4 632 aa17.29■□□□□ 0.36
PDLIM7-216ENST00000506537 A8MT66 165 aa17.29■□□□□ 0.36
PDLIM7-216ENST00000506537 H0YIG0 161 aa17.29■□□□□ 0.36
PDLIM7-216ENST00000506537 STX16-NPEPL1H3BU86 382 aa17.29■□□□□ 0.36
PDLIM7-216ENST00000506537 SGK494L7N484 410 aa17.29■□□□□ 0.36
PDLIM7-216ENST00000506537 E2F3O00716 465 aa17.29■□□□□ 0.36
PDLIM7-216ENST00000506537 STX16O14662 325 aa17.29■□□□□ 0.36
PDLIM7-216ENST00000506537 PRPF4O43172 522 aaKnown RBP eCLIP17.29■□□□□ 0.36
PDLIM7-216ENST00000506537 CDH16O75309 829 aa17.29■□□□□ 0.36
PDLIM7-216ENST00000506537 RDH16O75452 317 aa17.29■□□□□ 0.36
PDLIM7-216ENST00000506537 KLHL18O94889 574 aa17.29■□□□□ 0.36
PDLIM7-216ENST00000506537 ZGLP1P0C6A0 271 aa17.29■□□□□ 0.36
PDLIM7-216ENST00000506537 ZNF888P0CJ79 500 aaPredicted RBP17.29■□□□□ 0.36
PDLIM7-216ENST00000506537 EPB42P16452 691 aa17.29■□□□□ 0.36
PDLIM7-216ENST00000506537 EEF1DP29692 281 aaKnown RBP17.29■□□□□ 0.36
PDLIM7-216ENST00000506537 AVPR1BP47901 424 aa17.29■□□□□ 0.36
PDLIM7-216ENST00000506537 EFNA3P52797 238 aa17.29■□□□□ 0.36
PDLIM7-216ENST00000506537 POLE2P56282 527 aa17.29■□□□□ 0.36
PDLIM7-216ENST00000506537 KLC1Q07866 573 aa17.29■□□□□ 0.36
PDLIM7-216ENST00000506537 RGS1Q08116 209 aa17.29■□□□□ 0.36
PDLIM7-216ENST00000506537 ATP1A4Q13733 1029 aa17.29■□□□□ 0.36
PDLIM7-216ENST00000506537 SSPNQ14714 243 aa17.29■□□□□ 0.36
PDLIM7-216ENST00000506537 LCA5Q86VQ0 697 aa17.29■□□□□ 0.36
PDLIM7-216ENST00000506537 RAB43Q86YS6 212 aa17.29■□□□□ 0.36
PDLIM7-216ENST00000506537 ZC3H7AQ8IWR0 971 aaKnown RBP17.29■□□□□ 0.36
PDLIM7-216ENST00000506537 PRSS58Q8IYP2 241 aa17.29■□□□□ 0.36
PDLIM7-216ENST00000506537 KRT78Q8N1N4 520 aa17.29■□□□□ 0.36
PDLIM7-216ENST00000506537 MREGQ8N565 214 aa17.29■□□□□ 0.36
PDLIM7-216ENST00000506537 UTP15Q8TED0 518 aaKnown RBP17.29■□□□□ 0.36
PDLIM7-216ENST00000506537 APOBEC4Q8WW27 367 aaKnown RBP17.29■□□□□ 0.36
PDLIM7-216ENST00000506537 THAP4Q8WY91 577 aa17.29■□□□□ 0.36
PDLIM7-216ENST00000506537 MESP1Q9BRJ9 268 aa17.29■□□□□ 0.36
PDLIM7-216ENST00000506537 ANKHQ9HCJ1 492 aa17.29■□□□□ 0.36
PDLIM7-216ENST00000506537 HCN3Q9P1Z3 774 aa17.29■□□□□ 0.36
PDLIM7-216ENST00000506537 TMCO1Q9UM00 188 aa17.29■□□□□ 0.36
PDLIM7-216ENST00000506537 NAALAD2Q9Y3Q0 740 aa17.29■□□□□ 0.36
PDLIM7-216ENST00000506537 TNPO3Q9Y5L0 923 aaKnown RBP17.29■□□□□ 0.36
PDLIM7-216ENST00000506537 GALR3O60755 368 aaPredicted RBP17.28■□□□□ 0.36
PDLIM7-216ENST00000506537 SMIM24O75264 130 aa17.28■□□□□ 0.36
PDLIM7-216ENST00000506537 SERPINA6P08185 405 aa17.28■□□□□ 0.36
PDLIM7-216ENST00000506537 ALOX12P18054 663 aa17.28■□□□□ 0.36
PDLIM7-216ENST00000506537 HNRNPH1P31943 449 aaKnown RBP17.28■□□□□ 0.36
PDLIM7-216ENST00000506537 HNF4AP41235 474 aa17.28■□□□□ 0.36
PDLIM7-216ENST00000506537 CCR10P46092 362 aa17.28■□□□□ 0.36
PDLIM7-216ENST00000506537 CHAF1BQ13112 559 aa17.28■□□□□ 0.36
PDLIM7-216ENST00000506537 GTF2H2Q13888 395 aa17.28■□□□□ 0.36
PDLIM7-216ENST00000506537 HERC3Q15034 1050 aa17.28■□□□□ 0.36
PDLIM7-216ENST00000506537 DEFB134Q4QY38 66 aa17.28■□□□□ 0.36
PDLIM7-216ENST00000506537 TOR1AIP1Q5JTV8 583 aa17.28■□□□□ 0.36
PDLIM7-216ENST00000506537 GTF2H2CQ6P1K8 395 aa17.28■□□□□ 0.36
PDLIM7-216ENST00000506537 METTL2BQ6P1Q9 378 aaKnown RBP17.28■□□□□ 0.36
PDLIM7-216ENST00000506537 LAPTM4BQ86VI4 370 aa17.28■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms