RNA–Protein interactions for RNA: ENST00000506516.5

GYPB-206, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 473 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-206ENST00000506516 ENDOVQ8N8Q3 282 aaKnown RBP6.92□□□□□ -1.3
GYPB-206ENST00000506516 SNX31Q8N9S9 440 aa6.92□□□□□ -1.3
GYPB-206ENST00000506516 TRPV3Q8NET8 790 aa6.92□□□□□ -1.3
GYPB-206ENST00000506516 TTLQ8NG68 377 aa6.92□□□□□ -1.3
GYPB-206ENST00000506516 ACMSDQ8TDX5 336 aa6.92□□□□□ -1.3
GYPB-206ENST00000506516 THAP4Q8WY91 577 aa6.92□□□□□ -1.3
GYPB-206ENST00000506516 TM4SF19Q96DZ7 209 aa6.92□□□□□ -1.3
GYPB-206ENST00000506516 MMABQ96EY8 250 aaPredicted RBP6.92□□□□□ -1.3
GYPB-206ENST00000506516 WBP1Q96G27 269 aa6.92□□□□□ -1.3
GYPB-206ENST00000506516 UBL7Q96S82 380 aaPredicted RBP6.92□□□□□ -1.3
GYPB-206ENST00000506516 ATOH8Q96SQ7 321 aa6.92□□□□□ -1.3
GYPB-206ENST00000506516 YIPF2Q9BWQ6 316 aa6.92□□□□□ -1.3
GYPB-206ENST00000506516 PITHD1Q9GZP4 211 aaPredicted RBP6.92□□□□□ -1.3
GYPB-206ENST00000506516 EHD1Q9H4M9 534 aa6.92□□□□□ -1.3
GYPB-206ENST00000506516 ACTL8Q9H568 366 aa6.92□□□□□ -1.3
GYPB-206ENST00000506516 OPTCQ9UBM4 332 aa6.92□□□□□ -1.3
GYPB-206ENST00000506516 NOL12Q9UGY1 213 aaKnown RBP eCLIP6.92□□□□□ -1.3
GYPB-206ENST00000506516 TBK1Q9UHD2 729 aa6.92□□□□□ -1.3
GYPB-206ENST00000506516 DCDC2Q9UHG0 476 aa6.92□□□□□ -1.3
GYPB-206ENST00000506516 ZFP69BQ9UJL9 534 aa6.92□□□□□ -1.3
GYPB-206ENST00000506516 TCFL5Q9UL49 500 aa6.92□□□□□ -1.3
GYPB-206ENST00000506516 RUVBL1Q9Y265 456 aaKnown RBP6.92□□□□□ -1.3
GYPB-206ENST00000506516 ANGPTL3Q9Y5C1 460 aa6.92□□□□□ -1.3
GYPB-206ENST00000506516 MRPS18BQ9Y676 258 aaKnown RBP6.92□□□□□ -1.3
GYPB-206ENST00000506516 V9GYY5 206 aaPredicted RBP6.92□□□□□ -1.3
GYPB-206ENST00000506516 KIF26BQ2KJY2 2108 aa6.92□□□□□ -1.3
GYPB-206ENST00000506516 URB1O60287 2271 aaKnown RBP6.92□□□□□ -1.3
GYPB-206ENST00000506516 TLDC2A0PJX2 215 aa6.91□□□□□ -1.3
GYPB-206ENST00000506516 CDC14CA4D256 554 aa6.91□□□□□ -1.3
GYPB-206ENST00000506516 ANKDD1BA6NHY2 528 aa6.91□□□□□ -1.3
GYPB-206ENST00000506516 H0YIG0 161 aa6.91□□□□□ -1.3
GYPB-206ENST00000506516 NDUFS4O43181 175 aa6.91□□□□□ -1.3
GYPB-206ENST00000506516 WIPF1O43516 503 aa6.91□□□□□ -1.3
GYPB-206ENST00000506516 CDH16O75309 829 aa6.91□□□□□ -1.3
GYPB-206ENST00000506516 RFPL1O75677 317 aa6.91□□□□□ -1.3
GYPB-206ENST00000506516 IGHEP01854 428 aa6.91□□□□□ -1.3
GYPB-206ENST00000506516 SHBGP04278 402 aa6.91□□□□□ -1.3
GYPB-206ENST00000506516 RPLP1P05386 114 aaKnown RBP6.91□□□□□ -1.3
GYPB-206ENST00000506516 CAPN1P07384 714 aa6.91□□□□□ -1.3
GYPB-206ENST00000506516 GSTA1P08263 222 aa6.91□□□□□ -1.3
GYPB-206ENST00000506516 SFTPCP11686 197 aa6.91□□□□□ -1.3
GYPB-206ENST00000506516 KRT15P19012 456 aa6.91□□□□□ -1.3
GYPB-206ENST00000506516 TAC1P20366 129 aa6.91□□□□□ -1.3
GYPB-206ENST00000506516 ITGAXP20702 1163 aa6.91□□□□□ -1.3
GYPB-206ENST00000506516 GSTM2P28161 218 aa6.91□□□□□ -1.3
GYPB-206ENST00000506516 GCAP28676 217 aa6.91□□□□□ -1.3
GYPB-206ENST00000506516 HPDP32754 393 aaPredicted RBP6.91□□□□□ -1.3
GYPB-206ENST00000506516 GMPRP36959 345 aa6.91□□□□□ -1.3
GYPB-206ENST00000506516 HSD17B3P37058 310 aa6.91□□□□□ -1.3
GYPB-206ENST00000506516 BCL6P41182 706 aa6.91□□□□□ -1.3
GYPB-206ENST00000506516 FOLR3P41439 243 aa6.91□□□□□ -1.3
GYPB-206ENST00000506516 CCR10P46092 362 aa6.91□□□□□ -1.3
GYPB-206ENST00000506516 OR1D4P47884 311 aa6.91□□□□□ -1.3
GYPB-206ENST00000506516 CCT5P48643 541 aa6.91□□□□□ -1.3
GYPB-206ENST00000506516 PIK3CGP48736 1102 aa6.91□□□□□ -1.3
GYPB-206ENST00000506516 SKP1P63208 163 aa6.91□□□□□ -1.3
GYPB-206ENST00000506516 IRF8Q02556 426 aa6.91□□□□□ -1.3
GYPB-206ENST00000506516 IFFO1Q0D2I5 559 aa6.91□□□□□ -1.3
GYPB-206ENST00000506516 CDC20Q12834 499 aa6.91□□□□□ -1.3
GYPB-206ENST00000506516 SETDB1Q15047 1291 aa6.91□□□□□ -1.3
GYPB-206ENST00000506516 RASA2Q15283 850 aa6.91□□□□□ -1.3
GYPB-206ENST00000506516 TBCCQ15814 346 aa6.91□□□□□ -1.3
GYPB-206ENST00000506516 UGT8Q16880 541 aa6.91□□□□□ -1.3
GYPB-206ENST00000506516 DEFB109BQ30KR1 87 aa6.91□□□□□ -1.3
GYPB-206ENST00000506516 C18orf21Q32NC0 220 aaPredicted RBP6.91□□□□□ -1.3
GYPB-206ENST00000506516 XKR6Q5GH73 641 aa6.91□□□□□ -1.3
GYPB-206ENST00000506516 TECRLQ5HYJ1 363 aa6.91□□□□□ -1.3
GYPB-206ENST00000506516 METTL2BQ6P1Q9 378 aaKnown RBP6.91□□□□□ -1.3
GYPB-206ENST00000506516 TMIGD1Q6UXZ0 262 aa6.91□□□□□ -1.3
GYPB-206ENST00000506516 SLCO4C1Q6ZQN7 724 aa6.91□□□□□ -1.3
GYPB-206ENST00000506516 TDRPQ86YL5 185 aa6.91□□□□□ -1.3
GYPB-206ENST00000506516 RAB43Q86YS6 212 aa6.91□□□□□ -1.3
GYPB-206ENST00000506516 PLD6Q8N2A8 252 aaKnown RBP6.91□□□□□ -1.3
GYPB-206ENST00000506516 LSM14AQ8ND56 463 aaKnown RBP6.91□□□□□ -1.3
GYPB-206ENST00000506516 CAVIN3Q969G5 261 aa6.91□□□□□ -1.3
GYPB-206ENST00000506516 UBE2E3Q969T4 207 aa6.91□□□□□ -1.3
GYPB-206ENST00000506516 GTPBP3Q969Y2 492 aaKnown RBP6.91□□□□□ -1.3
GYPB-206ENST00000506516 ESAMQ96AP7 390 aa6.91□□□□□ -1.3
GYPB-206ENST00000506516 FKBP10Q96AY3 582 aa6.91□□□□□ -1.3
GYPB-206ENST00000506516 NACC2Q96BF6 587 aa6.91□□□□□ -1.3
GYPB-206ENST00000506516 PTCD3Q96EY7 689 aaKnown RBP6.91□□□□□ -1.3
GYPB-206ENST00000506516 SEC16BQ96JE7 1060 aa6.91□□□□□ -1.3
GYPB-206ENST00000506516 VPS50Q96JG6 964 aa6.91□□□□□ -1.3
GYPB-206ENST00000506516 GPR78Q96P69 363 aa6.91□□□□□ -1.3
GYPB-206ENST00000506516 IP6K3Q96PC2 410 aa6.91□□□□□ -1.3
GYPB-206ENST00000506516 MRPL57Q9BQC6 102 aaKnown RBP6.91□□□□□ -1.3
GYPB-206ENST00000506516 TMEM79Q9BSE2 394 aa6.91□□□□□ -1.3
GYPB-206ENST00000506516 PARD6BQ9BYG5 372 aa6.91□□□□□ -1.3
GYPB-206ENST00000506516 ROPN1BQ9BZX4 212 aaPredicted RBP6.91□□□□□ -1.3
GYPB-206ENST00000506516 DRC3Q9H069 523 aa6.91□□□□□ -1.3
GYPB-206ENST00000506516 MRPL46Q9H2W6 279 aaKnown RBP6.91□□□□□ -1.3
GYPB-206ENST00000506516 EPB41L4BQ9H329 900 aa6.91□□□□□ -1.3
GYPB-206ENST00000506516 NT5DC2Q9H857 520 aa6.91□□□□□ -1.3
GYPB-206ENST00000506516 WDR54Q9H977 334 aa6.91□□□□□ -1.3
GYPB-206ENST00000506516 ROPN1Q9HAT0 212 aaPredicted RBP6.91□□□□□ -1.3
GYPB-206ENST00000506516 ANKHQ9HCJ1 492 aa6.91□□□□□ -1.3
GYPB-206ENST00000506516 CPSF2Q9P2I0 782 aaKnown RBP6.91□□□□□ -1.3
GYPB-206ENST00000506516 ZNF282Q9UDV7 671 aaPredicted RBP6.91□□□□□ -1.3
GYPB-206ENST00000506516 NXT1Q9UKK6 140 aaKnown RBP6.91□□□□□ -1.3
GYPB-206ENST00000506516 SH2B3Q9UQQ2 575 aa6.91□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms