RNA–Protein interactions for RNA: ENST00000506426.1

TRAPPC11-205, Transcript of trafficking protein particle complex 11, humanhuman

TSL 2

Gene TRAPPC11, Length 395 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-205ENST00000506426 CCDC69A6NI79 296 aa2.98□□□□□ -1.93
TRAPPC11-205ENST00000506426 F8VVB4 439 aa2.98□□□□□ -1.93
TRAPPC11-205ENST00000506426 F8VWA3 439 aa2.98□□□□□ -1.93
TRAPPC11-205ENST00000506426 VEGFDO43915 354 aa2.98□□□□□ -1.93
TRAPPC11-205ENST00000506426 CTSVO60911 334 aa2.98□□□□□ -1.93
TRAPPC11-205ENST00000506426 PRKRAO75569 313 aaKnown RBP2.98□□□□□ -1.93
TRAPPC11-205ENST00000506426 B3GALNT1O75752 331 aa2.98□□□□□ -1.93
TRAPPC11-205ENST00000506426 BCAS2O75934 225 aaPredicted RBP2.98□□□□□ -1.93
TRAPPC11-205ENST00000506426 PAPSS2O95340 614 aaPredicted RBP2.98□□□□□ -1.93
TRAPPC11-205ENST00000506426 PIGNO95427 931 aa2.98□□□□□ -1.93
TRAPPC11-205ENST00000506426 SERPING1P05155 500 aa2.98□□□□□ -1.93
TRAPPC11-205ENST00000506426 HSPA5P11021 654 aaKnown RBP2.98□□□□□ -1.93
TRAPPC11-205ENST00000506426 TYMPP19971 482 aa2.98□□□□□ -1.93
TRAPPC11-205ENST00000506426 MAPK3P27361 379 aaPredicted RBP2.98□□□□□ -1.93
TRAPPC11-205ENST00000506426 EPHA2P29317 976 aa2.98□□□□□ -1.93
TRAPPC11-205ENST00000506426 RFC4P35249 363 aa2.98□□□□□ -1.93
TRAPPC11-205ENST00000506426 CHRNA7P36544 502 aa2.98□□□□□ -1.93
TRAPPC11-205ENST00000506426 HOXA1P49639 335 aaPredicted RBP2.98□□□□□ -1.93
TRAPPC11-205ENST00000506426 PRELPP51888 382 aa2.98□□□□□ -1.93
TRAPPC11-205ENST00000506426 FUT6P51993 359 aa2.98□□□□□ -1.93
TRAPPC11-205ENST00000506426 CDH11P55287 796 aa2.98□□□□□ -1.93
TRAPPC11-205ENST00000506426 STARD6P59095 220 aa2.98□□□□□ -1.93
TRAPPC11-205ENST00000506426 IL1RL1Q01638 556 aa2.98□□□□□ -1.93
TRAPPC11-205ENST00000506426 LTBQ06643 244 aa2.98□□□□□ -1.93
TRAPPC11-205ENST00000506426 WASHC5Q12768 1159 aa2.98□□□□□ -1.93
TRAPPC11-205ENST00000506426 SLC39A6Q13433 755 aa2.98□□□□□ -1.93
TRAPPC11-205ENST00000506426 PPA1Q15181 289 aa2.98□□□□□ -1.93
TRAPPC11-205ENST00000506426 MAPK11Q15759 364 aa2.98□□□□□ -1.93
TRAPPC11-205ENST00000506426 SPDYCQ5MJ68 293 aa2.98□□□□□ -1.93
TRAPPC11-205ENST00000506426 PDSS1Q5T2R2 415 aa2.98□□□□□ -1.93
TRAPPC11-205ENST00000506426 STXBP5Q5T5C0 1151 aa2.98□□□□□ -1.93
TRAPPC11-205ENST00000506426 FAM46CQ5VWP2 391 aa2.98□□□□□ -1.93
TRAPPC11-205ENST00000506426 SUSD4Q5VX71 490 aa2.98□□□□□ -1.93
TRAPPC11-205ENST00000506426 LYSMD4Q5XG99 296 aa2.98□□□□□ -1.93
TRAPPC11-205ENST00000506426 OR4A47Q6IF82 309 aa2.98□□□□□ -1.93
TRAPPC11-205ENST00000506426 FUT10Q6P4F1 479 aa2.98□□□□□ -1.93
TRAPPC11-205ENST00000506426 PRSS55Q6UWB4 352 aaPredicted RBP2.98□□□□□ -1.93
TRAPPC11-205ENST00000506426 KCTD8Q6ZWB6 473 aa2.98□□□□□ -1.93
TRAPPC11-205ENST00000506426 PLD3Q8IV08 490 aa2.98□□□□□ -1.93
TRAPPC11-205ENST00000506426 AQP12AQ8IXF9 295 aa2.98□□□□□ -1.93
TRAPPC11-205ENST00000506426 CCDC63Q8NA47 563 aa2.98□□□□□ -1.93
TRAPPC11-205ENST00000506426 OR2T12Q8NG77 320 aa2.98□□□□□ -1.93
TRAPPC11-205ENST00000506426 ZNF473Q8WTR7 871 aaKnown RBP2.98□□□□□ -1.93
TRAPPC11-205ENST00000506426 PHLDA1Q8WV24 401 aaPredicted RBP2.98□□□□□ -1.93
TRAPPC11-205ENST00000506426 RSPH1Q8WYR4 309 aa2.98□□□□□ -1.93
TRAPPC11-205ENST00000506426 HSD17B8Q92506 261 aa2.98□□□□□ -1.93
TRAPPC11-205ENST00000506426 CFAP36Q96G28 342 aa2.98□□□□□ -1.93
TRAPPC11-205ENST00000506426 ZNF778Q96MU6 729 aa2.98□□□□□ -1.93
TRAPPC11-205ENST00000506426 RUNDC3BQ96NL0 473 aa2.98□□□□□ -1.93
TRAPPC11-205ENST00000506426 FCRL4Q96PJ5 515 aa2.98□□□□□ -1.93
TRAPPC11-205ENST00000506426 PANX3Q96QZ0 392 aa2.98□□□□□ -1.93
TRAPPC11-205ENST00000506426 MTMR12Q9C0I1 747 aa2.98□□□□□ -1.93
TRAPPC11-205ENST00000506426 SDCBP2Q9H190 292 aa2.98□□□□□ -1.93
TRAPPC11-205ENST00000506426 ABCG8Q9H221 673 aa2.98□□□□□ -1.93
TRAPPC11-205ENST00000506426 TLE6Q9H808 572 aa2.98□□□□□ -1.93
TRAPPC11-205ENST00000506426 PANK3Q9H999 370 aa2.98□□□□□ -1.93
TRAPPC11-205ENST00000506426 LRRC4Q9HBW1 653 aa2.98□□□□□ -1.93
TRAPPC11-205ENST00000506426 ZBTB20Q9HC78 741 aaPredicted RBP2.98□□□□□ -1.93
TRAPPC11-205ENST00000506426 A4GALTQ9NPC4 353 aa2.98□□□□□ -1.93
TRAPPC11-205ENST00000506426 DNAJC11Q9NVH1 559 aa2.98□□□□□ -1.93
TRAPPC11-205ENST00000506426 MAD2L2Q9UI95 211 aa2.98□□□□□ -1.93
TRAPPC11-205ENST00000506426 HOOK1Q9UJC3 728 aaKnown RBP2.98□□□□□ -1.93
TRAPPC11-205ENST00000506426 TDRKHQ9Y2W6 561 aaKnown RBP2.98□□□□□ -1.93
TRAPPC11-205ENST00000506426 HBS1LQ9Y450 684 aaKnown RBP2.98□□□□□ -1.93
TRAPPC11-205ENST00000506426 TJP1Q07157 1748 aa2.98□□□□□ -1.93
TRAPPC11-205ENST00000506426 PCSK5Q92824 1860 aa2.98□□□□□ -1.93
TRAPPC11-205ENST00000506426 TAF1LQ8IZX4 1826 aa2.98□□□□□ -1.93
TRAPPC11-205ENST00000506426 RNF103-CHMP3A0A140T963 221 aa2.97□□□□□ -1.93
TRAPPC11-205ENST00000506426 A0A1W2PS18 150 aa2.97□□□□□ -1.93
TRAPPC11-205ENST00000506426 SLC9B1P1A6NJY1 282 aa2.97□□□□□ -1.93
TRAPPC11-205ENST00000506426 C2orf81A6NN90 581 aa2.97□□□□□ -1.93
TRAPPC11-205ENST00000506426 PRSS46E5RG02 174 aa2.97□□□□□ -1.93
TRAPPC11-205ENST00000506426 NPIPA3F8WFD2 350 aa2.97□□□□□ -1.93
TRAPPC11-205ENST00000506426 RNF103O00237 685 aa2.97□□□□□ -1.93
TRAPPC11-205ENST00000506426 PRDM1O75626 825 aa2.97□□□□□ -1.93
TRAPPC11-205ENST00000506426 IGHV4-39P01824 125 aa2.97□□□□□ -1.93
TRAPPC11-205ENST00000506426 SBK2P0C263 348 aa2.97□□□□□ -1.93
TRAPPC11-205ENST00000506426 SP9P0CG40 484 aa2.97□□□□□ -1.93
TRAPPC11-205ENST00000506426 PCP11498 1178 aaKnown RBP2.97□□□□□ -1.93
TRAPPC11-205ENST00000506426 MSH3P20585 1137 aa2.97□□□□□ -1.93
TRAPPC11-205ENST00000506426 CDH3P22223 829 aa2.97□□□□□ -1.93
TRAPPC11-205ENST00000506426 IL10P22301 178 aa2.97□□□□□ -1.93
TRAPPC11-205ENST00000506426 SSTR1P30872 391 aa2.97□□□□□ -1.93
TRAPPC11-205ENST00000506426 CSTF2P33240 577 aaKnown RBP eCLIP2.97□□□□□ -1.93
TRAPPC11-205ENST00000506426 CETN2P41208 172 aa2.97□□□□□ -1.93
TRAPPC11-205ENST00000506426 GLIPR1P48060 266 aa2.97□□□□□ -1.93
TRAPPC11-205ENST00000506426 HTR6P50406 440 aa2.97□□□□□ -1.93
TRAPPC11-205ENST00000506426 UCP2P55851 309 aa2.97□□□□□ -1.93
TRAPPC11-205ENST00000506426 GFPT1Q06210 699 aaPredicted RBP2.97□□□□□ -1.93
TRAPPC11-205ENST00000506426 SLC34A1Q06495 639 aa2.97□□□□□ -1.93
TRAPPC11-205ENST00000506426 LGALS3BPQ08380 585 aa2.97□□□□□ -1.93
TRAPPC11-205ENST00000506426 CETN1Q12798 172 aa2.97□□□□□ -1.93
TRAPPC11-205ENST00000506426 CCDC142Q17RM4 750 aa2.97□□□□□ -1.93
TRAPPC11-205ENST00000506426 TOR1AIP1Q5JTV8 583 aa2.97□□□□□ -1.93
TRAPPC11-205ENST00000506426 SIRPB2Q5JXA9 342 aa2.97□□□□□ -1.93
TRAPPC11-205ENST00000506426 PRAMEF8Q5VWM4 474 aa2.97□□□□□ -1.93
TRAPPC11-205ENST00000506426 KCTD11Q693B1 232 aa2.97□□□□□ -1.93
TRAPPC11-205ENST00000506426 CTR9Q6PD62 1173 aa2.97□□□□□ -1.93
TRAPPC11-205ENST00000506426 C9orf47Q6ZRZ4 202 aa2.97□□□□□ -1.93
TRAPPC11-205ENST00000506426 TUBA1AQ71U36 451 aa2.97□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms