RNA–Protein interactions for RNA: ENST00000506163.5

SMN1-204, Transcript of survival of motor neuron 1, telomeric, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SMN1, Length 1,445 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN1-204ENST00000506163 JRKO75564 520 aa16.9■□□□□ 0.3
SMN1-204ENST00000506163 WFS1O76024 890 aa16.9■□□□□ 0.3
SMN1-204ENST00000506163 NSA2O95478 260 aaKnown RBP16.9■□□□□ 0.3
SMN1-204ENST00000506163 SERPIND1P05546 499 aa16.9■□□□□ 0.3
SMN1-204ENST00000506163 SMIM10L1P0DMW3 83 aa16.9■□□□□ 0.3
SMN1-204ENST00000506163 MMP11P24347 488 aa16.9■□□□□ 0.3
SMN1-204ENST00000506163 E2F2Q14209 437 aa16.9■□□□□ 0.3
SMN1-204ENST00000506163 KIRREL2Q6UWL6 708 aa16.9■□□□□ 0.3
SMN1-204ENST00000506163 TAOK1Q7L7X3 1001 aa16.9■□□□□ 0.3
SMN1-204ENST00000506163 LRRC70Q7Z2Q7 622 aa16.9■□□□□ 0.3
SMN1-204ENST00000506163 RAB43Q86YS6 212 aa16.9■□□□□ 0.3
SMN1-204ENST00000506163 ZC3H7AQ8IWR0 971 aaKnown RBP16.9■□□□□ 0.3
SMN1-204ENST00000506163 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP16.9■□□□□ 0.3
SMN1-204ENST00000506163 CYP4X1Q8N118 509 aa16.9■□□□□ 0.3
SMN1-204ENST00000506163 UTP15Q8TED0 518 aaKnown RBP16.9■□□□□ 0.3
SMN1-204ENST00000506163 SMIM10Q96HG1 83 aa16.9■□□□□ 0.3
SMN1-204ENST00000506163 SLC6A16Q9GZN6 736 aa16.9■□□□□ 0.3
SMN1-204ENST00000506163 ADNPQ9H2P0 1102 aa16.9■□□□□ 0.3
SMN1-204ENST00000506163 P4HTMQ9NXG6 502 aa16.9■□□□□ 0.3
SMN1-204ENST00000506163 NAALAD2Q9Y3Q0 740 aa16.9■□□□□ 0.3
SMN1-204ENST00000506163 HS3ST3B1Q9Y662 390 aa16.9■□□□□ 0.3
SMN1-204ENST00000506163 OR2W5A6NFC9 320 aa16.89■□□□□ 0.29
SMN1-204ENST00000506163 SYCE1LA8MT33 242 aa16.89■□□□□ 0.29
SMN1-204ENST00000506163 H0YIG0 161 aa16.89■□□□□ 0.29
SMN1-204ENST00000506163 K7EPI3 171 aa16.89■□□□□ 0.29
SMN1-204ENST00000506163 KLHL18O94889 574 aa16.89■□□□□ 0.29
SMN1-204ENST00000506163 SIX3O95343 332 aaPredicted RBP16.89■□□□□ 0.29
SMN1-204ENST00000506163 PDGFAP04085 211 aa16.89■□□□□ 0.29
SMN1-204ENST00000506163 SLC35G6P0C7Q6 338 aa16.89■□□□□ 0.29
SMN1-204ENST00000506163 ZNF888P0CJ79 500 aaPredicted RBP16.89■□□□□ 0.29
SMN1-204ENST00000506163 COL6A2P12110 1019 aa16.89■□□□□ 0.29
SMN1-204ENST00000506163 NR1D1P20393 614 aa16.89■□□□□ 0.29
SMN1-204ENST00000506163 HNF4AP41235 474 aa16.89■□□□□ 0.29
SMN1-204ENST00000506163 CASP2P42575 452 aa16.89■□□□□ 0.29
SMN1-204ENST00000506163 CCL11P51671 97 aa16.89■□□□□ 0.29
SMN1-204ENST00000506163 ALDH18A1P54886 795 aaKnown RBP16.89■□□□□ 0.29
SMN1-204ENST00000506163 OCA2Q04671 838 aa16.89■□□□□ 0.29
SMN1-204ENST00000506163 PCDH1Q08174 1060 aa16.89■□□□□ 0.29
SMN1-204ENST00000506163 XKR6Q5GH73 641 aa16.89■□□□□ 0.29
SMN1-204ENST00000506163 KLC3Q6P597 504 aa16.89■□□□□ 0.29
SMN1-204ENST00000506163 TMIGD1Q6UXZ0 262 aa16.89■□□□□ 0.29
SMN1-204ENST00000506163 AMER2Q8N7J2 671 aa16.89■□□□□ 0.29
SMN1-204ENST00000506163 OR5T3Q8NGG3 340 aa16.89■□□□□ 0.29
SMN1-204ENST00000506163 UBLCP1Q8WVY7 318 aaPredicted RBP16.89■□□□□ 0.29
SMN1-204ENST00000506163 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP16.89■□□□□ 0.29
SMN1-204ENST00000506163 MIEF2Q96C03 454 aa16.89■□□□□ 0.29
SMN1-204ENST00000506163 YIPF2Q9BWQ6 316 aa16.89■□□□□ 0.29
SMN1-204ENST00000506163 CAPS2Q9BXY5 557 aa16.89■□□□□ 0.29
SMN1-204ENST00000506163 TGIF2Q9GZN2 237 aa16.89■□□□□ 0.29
SMN1-204ENST00000506163 EHD1Q9H4M9 534 aa16.89■□□□□ 0.29
SMN1-204ENST00000506163 NT5DC2Q9H857 520 aa16.89■□□□□ 0.29
SMN1-204ENST00000506163 ZNF71Q9NQZ8 489 aaPredicted RBP16.89■□□□□ 0.29
SMN1-204ENST00000506163 HCN3Q9P1Z3 774 aa16.89■□□□□ 0.29
SMN1-204ENST00000506163 CPSF2Q9P2I0 782 aaKnown RBP16.89■□□□□ 0.29
SMN1-204ENST00000506163 XPR1Q9UBH6 696 aa16.89■□□□□ 0.29
SMN1-204ENST00000506163 TBK1Q9UHD2 729 aa16.89■□□□□ 0.29
SMN1-204ENST00000506163 TUBD1Q9UJT1 453 aa16.89■□□□□ 0.29
SMN1-204ENST00000506163 NXT1Q9UKK6 140 aaKnown RBP16.89■□□□□ 0.29
SMN1-204ENST00000506163 A0A1W2PPM1 405 aa16.88■□□□□ 0.29
SMN1-204ENST00000506163 ZNF860A6NHJ4 632 aa16.88■□□□□ 0.29
SMN1-204ENST00000506163 GOLGA8RI6L899 631 aa16.88■□□□□ 0.29
SMN1-204ENST00000506163 CLGNO14967 610 aa16.88■□□□□ 0.29
SMN1-204ENST00000506163 ALOX12BO75342 701 aa16.88■□□□□ 0.29
SMN1-204ENST00000506163 H2AFYO75367 372 aaKnown RBP16.88■□□□□ 0.29
SMN1-204ENST00000506163 RDH16O75452 317 aa16.88■□□□□ 0.29
SMN1-204ENST00000506163 BMP10O95393 424 aa16.88■□□□□ 0.29
SMN1-204ENST00000506163 SERPINA6P08185 405 aa16.88■□□□□ 0.29
SMN1-204ENST00000506163 RBP1P09455 135 aa16.88■□□□□ 0.29
SMN1-204ENST00000506163 GFAPP14136 432 aa16.88■□□□□ 0.29
SMN1-204ENST00000506163 HSD17B3P37058 310 aa16.88■□□□□ 0.29
SMN1-204ENST00000506163 AVPR1BP47901 424 aa16.88■□□□□ 0.29
SMN1-204ENST00000506163 CHIT1Q13231 466 aa16.88■□□□□ 0.29
SMN1-204ENST00000506163 NAA30Q147X3 362 aaPredicted RBP16.88■□□□□ 0.29
SMN1-204ENST00000506163 PCBP2Q15366 365 aaKnown RBP eCLIP16.88■□□□□ 0.29
SMN1-204ENST00000506163 ERCC6LQ2NKX8 1250 aa16.88■□□□□ 0.29
SMN1-204ENST00000506163 DEFB134Q4QY38 66 aa16.88■□□□□ 0.29
SMN1-204ENST00000506163 LGSNQ5TDP6 509 aa16.88■□□□□ 0.29
SMN1-204ENST00000506163 SH2D5Q6ZV89 423 aa16.88■□□□□ 0.29
SMN1-204ENST00000506163 TEX9Q8N6V9 391 aa16.88■□□□□ 0.29
SMN1-204ENST00000506163 TRPV3Q8NET8 790 aa16.88■□□□□ 0.29
SMN1-204ENST00000506163 OR51Q1Q8NH59 317 aa16.88■□□□□ 0.29
SMN1-204ENST00000506163 MTBPQ96DY7 904 aa16.88■□□□□ 0.29
SMN1-204ENST00000506163 PTCD3Q96EY7 689 aaKnown RBP16.88■□□□□ 0.29
SMN1-204ENST00000506163 SCN2AQ99250 2005 aa16.88■□□□□ 0.29
SMN1-204ENST00000506163 CRB3Q9BUF7 120 aa16.88■□□□□ 0.29
SMN1-204ENST00000506163 SLC25A18Q9H1K4 315 aa16.88■□□□□ 0.29
SMN1-204ENST00000506163 ANKHQ9HCJ1 492 aa16.88■□□□□ 0.29
SMN1-204ENST00000506163 MKKSQ9NPJ1 570 aaPredicted RBP16.88■□□□□ 0.29
SMN1-204ENST00000506163 PSMC3IPQ9P2W1 217 aaPredicted RBP16.88■□□□□ 0.29
SMN1-204ENST00000506163 OPTCQ9UBM4 332 aa16.88■□□□□ 0.29
SMN1-204ENST00000506163 C3orf18Q9UK00 162 aa16.88■□□□□ 0.29
SMN1-204ENST00000506163 TNRC6AQ8NDV7 1962 aaKnown RBP16.88■□□□□ 0.29
SMN1-204ENST00000506163 IDSB3KWA1 339 aa16.87■□□□□ 0.29
SMN1-204ENST00000506163 GALR3O60755 368 aaPredicted RBP16.87■□□□□ 0.29
SMN1-204ENST00000506163 ALOX12P18054 663 aa16.87■□□□□ 0.29
SMN1-204ENST00000506163 CXCR2P25025 360 aa16.87■□□□□ 0.29
SMN1-204ENST00000506163 HNRNPH1P31943 449 aaKnown RBP16.87■□□□□ 0.29
SMN1-204ENST00000506163 SLCO1A2P46721 670 aa16.87■□□□□ 0.29
SMN1-204ENST00000506163 RAB8AP61006 207 aa16.87■□□□□ 0.29
SMN1-204ENST00000506163 IRF8Q02556 426 aa16.87■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms