RNA–Protein interactions for RNA: ENST00000505397.1

LIN54-204, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

APPRIS P1 TSL 5 BASIC

Gene LIN54, Length 2,742 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-204ENST00000505397 C12orf40Q86WS4 652 aa16.33■□□□□ 0.21
LIN54-204ENST00000505397 SVOPQ8N4V2 548 aa16.33■□□□□ 0.21
LIN54-204ENST00000505397 ITPKCQ96DU7 683 aa16.33■□□□□ 0.21
LIN54-204ENST00000505397 C7orf34Q96L11 122 aa16.33■□□□□ 0.21
LIN54-204ENST00000505397 ALOXE3Q9BYJ1 711 aa16.33■□□□□ 0.21
LIN54-204ENST00000505397 SPATA6Q9NWH7 488 aaPredicted RBP16.33■□□□□ 0.21
LIN54-204ENST00000505397 GIN1Q9NXP7 522 aa16.33■□□□□ 0.21
LIN54-204ENST00000505397 SLC27A6Q9Y2P4 619 aa16.33■□□□□ 0.21
LIN54-204ENST00000505397 RGS10O43665 173 aa16.33■□□□□ 0.2
LIN54-204ENST00000505397 WBP4O75554 376 aaKnown RBP16.33■□□□□ 0.2
LIN54-204ENST00000505397 CISD3P0C7P0 127 aa16.33■□□□□ 0.2
LIN54-204ENST00000505397 ATP1B2P14415 290 aaPredicted RBP16.33■□□□□ 0.2
LIN54-204ENST00000505397 SPINT3P49223 89 aa16.33■□□□□ 0.2
LIN54-204ENST00000505397 IFITM3Q01628 133 aa16.33■□□□□ 0.2
LIN54-204ENST00000505397 ARSIQ5FYB1 569 aa16.33■□□□□ 0.2
LIN54-204ENST00000505397 HORMAD1Q86X24 394 aa16.33■□□□□ 0.2
LIN54-204ENST00000505397 ZNF540Q8NDQ6 660 aa16.33■□□□□ 0.2
LIN54-204ENST00000505397 OR6Q1Q8NGQ2 317 aa16.33■□□□□ 0.2
LIN54-204ENST00000505397 SPATA9Q9BWV2 254 aa16.33■□□□□ 0.2
LIN54-204ENST00000505397 SIRT5Q9NXA8 310 aa16.33■□□□□ 0.2
LIN54-204ENST00000505397 SAMHD1Q9Y3Z3 626 aaKnown RBP16.33■□□□□ 0.2
LIN54-204ENST00000505397 PCDHB11Q9Y5F2 797 aa16.33■□□□□ 0.2
LIN54-204ENST00000505397 HSFX4A0A1B0GTS1 333 aaPredicted RBP16.32■□□□□ 0.2
LIN54-204ENST00000505397 HSFX3A0A1B0GWH4 333 aaPredicted RBP16.32■□□□□ 0.2
LIN54-204ENST00000505397 HEPACAM2A8MVW5 462 aa16.32■□□□□ 0.2
LIN54-204ENST00000505397 M0R3G1 203 aa16.32■□□□□ 0.2
LIN54-204ENST00000505397 ZNF30P17039 623 aa16.32■□□□□ 0.2
LIN54-204ENST00000505397 GRK3P35626 688 aa16.32■□□□□ 0.2
LIN54-204ENST00000505397 HALP42357 657 aa16.32■□□□□ 0.2
LIN54-204ENST00000505397 CRYBA2P53672 197 aa16.32■□□□□ 0.2
LIN54-204ENST00000505397 VBP1P61758 197 aa16.32■□□□□ 0.2
LIN54-204ENST00000505397 RAB30Q15771 203 aa16.32■□□□□ 0.2
LIN54-204ENST00000505397 TRIM16LQ309B1 348 aa16.32■□□□□ 0.2
LIN54-204ENST00000505397 ZNF621Q6ZSS3 439 aa16.32■□□□□ 0.2
LIN54-204ENST00000505397 IPCEF1Q8WWN9 437 aaPredicted RBP16.32■□□□□ 0.2
LIN54-204ENST00000505397 KRT84Q9NSB2 600 aa16.32■□□□□ 0.2
LIN54-204ENST00000505397 GDE1Q9NZC3 331 aa16.32■□□□□ 0.2
LIN54-204ENST00000505397 VPS29Q9UBQ0 182 aa16.32■□□□□ 0.2
LIN54-204ENST00000505397 KRT87PA6NCN2 255 aa16.32■□□□□ 0.2
LIN54-204ENST00000505397 TOR1BO14657 336 aa16.32■□□□□ 0.2
LIN54-204ENST00000505397 PAPLNO95428 1278 aa16.32■□□□□ 0.2
LIN54-204ENST00000505397 KRT20P35900 424 aa16.32■□□□□ 0.2
LIN54-204ENST00000505397 ST13P50502 369 aaKnown RBP16.32■□□□□ 0.2
LIN54-204ENST00000505397 IL1RL1Q01638 556 aa16.32■□□□□ 0.2
LIN54-204ENST00000505397 NPRL3Q12980 569 aa16.32■□□□□ 0.2
LIN54-204ENST00000505397 FADDQ13158 208 aa16.32■□□□□ 0.2
LIN54-204ENST00000505397 KCNC3Q14003 757 aa16.32■□□□□ 0.2
LIN54-204ENST00000505397 CLECL1Q8IZS7 167 aa16.32■□□□□ 0.2
LIN54-204ENST00000505397 MINDY2Q8NBR6 621 aa16.32■□□□□ 0.2
LIN54-204ENST00000505397 SKA2Q8WVK7 121 aaPredicted RBP16.32■□□□□ 0.2
LIN54-204ENST00000505397 APH1BQ8WW43 257 aa16.32■□□□□ 0.2
LIN54-204ENST00000505397 METTL2AQ96IZ6 378 aaKnown RBP16.32■□□□□ 0.2
LIN54-204ENST00000505397 LRIG1Q96JA1 1093 aa16.32■□□□□ 0.2
LIN54-204ENST00000505397 EPYCQ99645 322 aa16.32■□□□□ 0.2
LIN54-204ENST00000505397 DPH2Q9BQC3 489 aaPredicted RBP16.32■□□□□ 0.2
LIN54-204ENST00000505397 TRNAU1APQ9NX07 287 aaKnown RBP16.32■□□□□ 0.2
LIN54-204ENST00000505397 THUMPD1Q9NXG2 353 aaKnown RBP16.32■□□□□ 0.2
LIN54-204ENST00000505397 DEC1Q9P2X7 70 aa16.32■□□□□ 0.2
LIN54-204ENST00000505397 BTBD3Q9Y2F9 522 aa16.32■□□□□ 0.2
LIN54-204ENST00000505397 AP1M2Q9Y6Q5 423 aa16.32■□□□□ 0.2
LIN54-204ENST00000505397 OR2A25A4D2G3 310 aa16.32■□□□□ 0.2
LIN54-204ENST00000505397 TMEM229AB2RXF0 380 aa16.32■□□□□ 0.2
LIN54-204ENST00000505397 ADAM23O75077 832 aa16.32■□□□□ 0.2
LIN54-204ENST00000505397 ATP6V1G1O75348 118 aa16.32■□□□□ 0.2
LIN54-204ENST00000505397 NADKO95544 446 aaPredicted RBP16.32■□□□□ 0.2
LIN54-204ENST00000505397 COX7A2P14406 83 aa16.32■□□□□ 0.2
LIN54-204ENST00000505397 VIPR1P32241 457 aa16.32■□□□□ 0.2
LIN54-204ENST00000505397 TGFBR2P37173 567 aa16.32■□□□□ 0.2
LIN54-204ENST00000505397 VASPP50552 380 aaPredicted RBP16.32■□□□□ 0.2
LIN54-204ENST00000505397 HIST2H2ACQ16777 129 aaPredicted RBP16.32■□□□□ 0.2
LIN54-204ENST00000505397 SERPINA13PQ6UXR4 307 aa16.32■□□□□ 0.2
LIN54-204ENST00000505397 GLMNQ92990 594 aa16.32■□□□□ 0.2
LIN54-204ENST00000505397 TAMM41Q96BW9 452 aa16.32■□□□□ 0.2
LIN54-204ENST00000505397 MYOCQ99972 504 aa16.32■□□□□ 0.2
LIN54-204ENST00000505397 GABARAPL3Q9BY60 117 aa16.32■□□□□ 0.2
LIN54-204ENST00000505397 ATG10Q9H0Y0 220 aa16.32■□□□□ 0.2
LIN54-204ENST00000505397 REEP1Q9H902 201 aa16.32■□□□□ 0.2
LIN54-204ENST00000505397 DAPK2Q9UIK4 370 aa16.32■□□□□ 0.2
LIN54-204ENST00000505397 RUVBL1Q9Y265 456 aaKnown RBP16.32■□□□□ 0.2
LIN54-204ENST00000505397 C1orf226A1L170 272 aa16.31■□□□□ 0.2
LIN54-204ENST00000505397 KRBA1A5PL33 1030 aa16.31■□□□□ 0.2
LIN54-204ENST00000505397 CLDN24A6NM45 220 aa16.31■□□□□ 0.2
LIN54-204ENST00000505397 UPK3BL1B0FP48 263 aa16.31■□□□□ 0.2
LIN54-204ENST00000505397 UPK3BL2E5RIL1 263 aa16.31■□□□□ 0.2
LIN54-204ENST00000505397 SGTAO43765 313 aa16.31■□□□□ 0.2
LIN54-204ENST00000505397 PCDHGA12O60330 932 aa16.31■□□□□ 0.2
LIN54-204ENST00000505397 C9P02748 559 aa16.31■□□□□ 0.2
LIN54-204ENST00000505397 LAMP1P11279 417 aa16.31■□□□□ 0.2
LIN54-204ENST00000505397 BMP4P12644 408 aa16.31■□□□□ 0.2
LIN54-204ENST00000505397 RPS3AP61247 264 aaKnown RBP16.31■□□□□ 0.2
LIN54-204ENST00000505397 RPP38P78345 283 aaKnown RBP16.31■□□□□ 0.2
LIN54-204ENST00000505397 KCNJ10P78508 379 aa16.31■□□□□ 0.2
LIN54-204ENST00000505397 UBE2UQ5VVX9 321 aa16.31■□□□□ 0.2
LIN54-204ENST00000505397 ETFBKMTQ8IXQ9 262 aa16.31■□□□□ 0.2
LIN54-204ENST00000505397 ZNF366Q8N895 744 aa16.31■□□□□ 0.2
LIN54-204ENST00000505397 HRASLS5Q96KN8 279 aa16.31■□□□□ 0.2
LIN54-204ENST00000505397 ASPSCR1Q9BZE9 553 aa16.31■□□□□ 0.2
LIN54-204ENST00000505397 MTG2Q9H4K7 406 aa16.31■□□□□ 0.2
LIN54-204ENST00000505397 TPT1P8Q9HAU6 139 aa16.31■□□□□ 0.2
LIN54-204ENST00000505397 TMEM221A6NGB7 291 aa16.31■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms